mRNA_Ecto-sp6_S_contig10.664.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI) HSP 1 Score: 2634 bits (6827), Expect = 0.000e+0 Identity = 1733/1910 (90.73%), Postives = 1740/1910 (91.10%), Query Frame = 1
Query: 1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIPVATSTXXXXXXXXXXXXXXXXXXXXDILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVSARESDSEGEEDGGLGNGATAKGDAGSGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLMQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAA---GWSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAXXXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPKIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAGMQVDANVGSGDGSAAMSTRSPDGDGKKVTGDGDAGRKPSEITETSGGGAEIADGPGAVTSPPIENGNDGSPDPPAATPTKQEAEALSSSPQPDDGEEAGEGKDEGSRGGSAKRGRAERPSSGGDVGAGDNDGQPDNKRSRVSAFADSEDDAASSGEAVPATEETAATAAAAVDGGPAGTAVGGEEGAEALGIGVAAPAVSSESGRPAAADDAVDPTQPPXXXXXAVTLSKEEQEMIEEEEQLYGARIGASASEGANGSGGEAALGRLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTAKLAGGGGKRSRGGHGGRGSVPNGAAAVAVADGGTSGG---GIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEGGEVGRGPMGGNKRDTLILVSCSASPPAXXXXXXXXGDTRAGHTRVLAFEEDAKVVELPEGDGNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNRHPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSIEEAGEEGEGGGGVWEDVEAVCMFGVQKGGSVGKQSPERYEEEGLPAQKGWWGGFAWGEAGGSGSEPAAPGADGEEAGSSNGEARVEHVSAYVVLCRTGGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVATGIILANGRRGTAGRGGGKKVDGEANGAGTAAPSSDPMEVDDGATAPDSAAVAASASGEAPSAPDETVEKAGADAGGAEXXXXXXXXXXDGVVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSPLAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAASXXXXXXXXXXXXXXXXXXXXXXXXXXAPEEGEGGRSGGRGQDGSVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE 5712
MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIP DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX SVSARESDSEGEEDGGLGNGATAKGD G+GGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINL QGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAA G SRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAXXXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPK EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LAGMQVDANVGSGDGSAAMSTRSP GDGKKV GD DA KPSEITETSGGGAEIADGPGAVTSPPIENGNDGSPDPPAATPTKQEAEALSSSPQPDDGEEAGEGKD GSRGGSAKRGRAERPSSGGDVGAGDNDGQPD KRSRVSA AD EDDAASSGEAVPATEET ATAAAAV G PA TAVGGEEGAEALG GVAAP VSSESGRPAAAD A+DPT XXXXX QLYGARIGASASEGA+GSGGEAAL RLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKT KLAG GIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEG XXXXXXXXGDTRAGHTRVLAFEEDAKVVELPEGDGNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNR PVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGS+EEAGEEGEGGGGVWE+VEAVCMFGVQKGGSVG+QSPERYEEEGLPAQKGWWGG AWGEAGGSGSEP APG DGEEAGSSNGEARVEHV AYVV+CR GGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LAVATGIILANGRRG AGRGGGKKVDGEANGAGTAAPSSDPMEVDDGATAPDSAAV ASASGEAPSAPDETVEKAGADAG XXXXXXXXXX VVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSPLAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGA S XXXXXXXXXXXXXXXXXXXXXXXX PEEGEG RSGGRGQDGSVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLIL EVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE
Sbjct: 1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIP-------------------------DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXXAAGAGESAAGGVAXXXXXXXXXXXXXXXXXSVSARESDSEGEEDGGLGNGATAKGDGGAGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAADAAGCSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAXXXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT-LAGMQVDANVGSGDGSAAMSTRSPGGDGKKVAGDADADGKPSEITETSGGGAEIADGPGAVTSPPIENGNDGSPDPPAATPTKQEAEALSSSPQPDDGEEAGEGKDAGSRGGSAKRGRAERPSSGGDVGAGDNDGQPDKKRSRVSACADGEDDAASSGEAVPATEETTATAAAAVGGAPASTAVGGEEGAEALGDGVAAPTVSSESGRPAAADAAIDPTPXXXXXXXXXXXXXXXXXXXXXXXQLYGARIGASASEGADGSGGEAALARLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTTKLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTRAGHTRVLAFEEDAKVVELPEGDGNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNRDPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSVEEAGEEGEGGGGVWEEVEAVCMFGVQKGGSVGEQSPERYEEEGLPAQKGWWGGSAWGEAGGSGSEPTAPGDDGEEAGSSNGEARVEHVRAYVVVCRRGGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVATGIILANGRRGAAGRGGGKKVDGEANGAGTAAPSSDPMEVDDGATAPDSAAVDASASGEAPSAPDETVEKAGADAG---XXXXXXXXXXXSVVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSPLAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAVSAXXXXXXXXXXXXXXXXXXXXXXXX-TPEEGEGRRSGGRGQDGSVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILLEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE 1880
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: D7G8W9_ECTSI (CPSF_A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W9_ECTSI) HSP 1 Score: 486 bits (1252), Expect = 1.800e-154 Identity = 241/246 (97.97%), Postives = 242/246 (98.37%), Query Frame = 1
Query: 5785 NRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 6522
+RWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSD YLGSRVGKLTRRRTRGNLRDGARYCLLA TLDGGLG VLPVDERVFRRLYALQGIMSNALGHNGAANP RAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF
Sbjct: 11 SRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANP-RAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 255
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A835Z873_9STRA (Cleavage/polyadenylation specificity factor, A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z873_9STRA) HSP 1 Score: 234 bits (598), Expect = 9.650e-66 Identity = 116/269 (43.12%), Postives = 173/269 (64.31%), Query Frame = 1
Query: 5713 SGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDH----GPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDID 6507
+GPV AVAQ+ R++ + + + WDPK+ +L +G ++ YV+++SV+K F+++GD SVQ ++WR+ED S+ L+KD+E QV++ +L+D+P + IVV D N+K+L+YAP SRGG +L+C +D ++G+ VG +R R N + R+ LDG + ++ P++ER FRRLYALQG+M NAL H NP R RLF + +LDG+LLWRFV L A+ Q +LTRAIGTTVD V+ +LLD+D
Sbjct: 3 AGPVGAVAQISRYVATAAAASITILEWDPKSDSLRPVGIYEASQYVVTMSVVK-TFLVLGDVMNSVQFLMWRDEDRSINQLAKDYEPTQVYATVFLVDQPSLGIVVGDSSGNIKILRYAPQLLASRGGHRLVCDADFHIGAPVGAFGPQRLRNNKLNAPRFGAAVGGLDGSVALLAPLEERAFRRLYALQGVMCNALEHGAGVNP-RGARLFRSQLPAAAAAEGGRMKGVLDGALLWRFVSLPAQVQCELTRAIGTTVDAVLLSLLDVD 269
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A2D4CF34_PYTIN (CPSF_A domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF34_PYTIN) HSP 1 Score: 209 bits (532), Expect = 1.270e-55 Identity = 124/349 (35.53%), Postives = 194/349 (55.59%), Query Frame = 1
Query: 5533 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGAR---------------YCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFR---------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDI 6504
YV +GTG P GED++ +GRL+L+E+DYA +G+ + KLR +F KE G +S V+QLG H++ +VG K+IV ++ K+ L F+D ++Y++SLSVIK +++ D Y SV + WRE+ L L+KD+E + + E+ + E +A++ D N+ V+Q+AP SRGG +LL SD +LG ++ + R+ T + A+ Y L + +G +G ++ V ERVFRRL+ LQ +M N L N A NP R +R+ R + K+ LDG +L+RF+ LD Q +L R IGTT + ++ NLL++
Sbjct: 29 YVVIGTGFVGPHGEDESGKGRLLLYELDYAQYTTAEGETSAKLPKLRLIFIKEH------HHGAISFVSQLGPHVLAAVGMKLIV--YEFKSDQLTACAFYDAQMYIVSLSVIKD-YVMYADVYKSVHFLRWREKQRQLQLLAKDYEPLAITATEFSVAEKKLALLAGDMEENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQITSMIRKATGTSNPPAAQMAGHRKHQEQPSQSQYVTLLGSSEGSVGAIMAVGERVFRRLFTLQNVMINTLPQNCALNP-REFRMMKSNGGRRTGRPDAWCKQKWKKGFLDGHVLFRFLHLDYVAQKELARCIGTTPEVIIHNLLEV 367
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A1V9ZBF8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBF8_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.200e-53 Identity = 134/340 (39.41%), Postives = 198/340 (58.24%), Query Frame = 1
Query: 5533 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGA--RYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGP-TFR------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 6522
YV +GTG+ P GED+ +GRL+++E+DYA G + V KL+ V+AKE + G +S V QLG +++ +VG K+IV ++ K L F D ++Y++SL+VIK +IL GD Y SV + W + L L+KD E V + + + + + IV AD NV V Q+AP++ SRGG +LL +D ++G+RV + R+R L + Y L +T +GGLGV+ PV E+ FRRLY LQ IM NAL HN NP R +R H T R ++ K+ LD +++ RF+ LD Q +L R IGTT + V+ NLL++ ++LF
Sbjct: 1189 YVVIGTGIVSPNGEDENGKGRLLVYEIDYAQYTNASGATGNKVPKLKLVYAKEH------KQGAISMVKQLGIYVLAAVGSKLIV--YELKNSQLVGCAFFDAQLYIVSLNVIKSTYILYGDIYKSVYFLQWSPMEKRLVLLAKDFEHLAVSTTDVSVLDARLGIVAADMLANVHVFQFAPSSIESRGGQRLLRSADFHVGARVTAMLRKR----LFEAKVMTYVTLLATAEGGLGVLTPVHEKTFRRLYTLQTIMINALPHNAGLNP-REFRQAPHSRMTGRPDAWCTWKAKKAFLDMAVIGRFIDLDYVAQRELARCIGTTSEVVLHNLLELQRSTLF 1515
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A7S1BI36_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BI36_9STRA) HSP 1 Score: 207 bits (528), Expect = 2.710e-53 Identity = 140/397 (35.26%), Postives = 210/397 (52.90%), Query Frame = 1
Query: 5446 VVESHPMDSDENGVCMTLVRL--EQGGAPRM------YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAVKLRQVFAKE-QLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGA--------------------------RYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDH----GPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASL 6519
V++ H + E+G+ + ++ L E G M +V VGTG+ + GED ++GR++LFEV +E+ + L ++K+ LGPV+ G + L++ G +V V +W K L IGF ++ V +++ K F+L+ DAY S+ +VWRE D SLT L+KD+E V++A ++ P M V D R N++ QYAP SRGG KL+C++D +LG++ L R +L G+ R+ + T+DGG G V PV+ER FRRLYALQG++ NAL +GA N R +RLF G E ++ +LDG LL R+ L Q ++ RAIGTTVD +M NLL++D A +
Sbjct: 156 VLDKHALGEYEHGMSLNVLPLTTEAEGKTGMQTNSTLFVVVGTGIVDQDGEDIGSKGRVLLFEVKKP---KENVNAASPLSLSLTYSKDILLGPVTVLEGLKTGNQT---RLVIGAGAEVTVEQW--KDQQLTQIGFFHAQMQVQGVTMFK-TFMLLSDAYDSIHFLVWRESDKSLTLLAKDYEPTCVYAAGFINRGPTMYFVCHDDRENLQFFQYAPTDPASRGGNKLVCRADYHLGTQTTHLRTHLVRNSLLLGSATPATSWIALRHRDAMALRQEDPDCRRFGVHFGTVDGGFGAVFPVNERTFRRLYALQGVVGNALQQSGALNV-RGWRLFQRTTQRGACRSGERQKGVLDGGLLMRYCQLGYFQQEEIARAIGTTVDMIMDNLLELDCARM 542
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A5D6Z0P8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Z0P8_9STRA) HSP 1 Score: 219 bits (557), Expect = 2.740e-53 Identity = 128/342 (37.43%), Postives = 197/342 (57.60%), Query Frame = 1
Query: 5527 RMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIG--FHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDG-ARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPS--RAYRLFDHGPTFRYET------KQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLAS 6516
R YV VGTG P GED++ RGRL+L+E+DYA G + KLR +F K+ G +S VAQLG ++I +VG K+IV + + +LIG F+D +++++S+S++K F++ GD Y S + W+E+ L L+KD+E V + E+ + E +A++ D N+ V+QYAPN SRGG +LL D +LG +V + R+R +R Y + + +G + ++PV ERVFRRL+ LQ +M N L N A NP RA + H + R + K++ LD +L+RF+ LD Q ++TR IGTT + V+ NLL++ A+
Sbjct: 1473 RPYVVVGTGYVGPHGEDESGRGRLLLYELDYAQYVNHSGSTSGKLPKLRLIFVKDH------RQGAISMVAQLGPYVIAAVGSKLIVYEFKSE----QLIGCAFYDAQMFIVSISIVKD-FVMYGDVYKSAHFLRWKEKQRQLVLLAKDYEPLAVSTTEFNLFEKRLALLAVDVEENLHVMQYAPNDIESRGGQRLLRTGDFHLGVQVSSMFRKRITPAIRSAPVAYVNILGSSEGSISALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRAMKANSHRHSGRPDAWSKQKWKKSFLDAQVLFRFLQLDYVAQKEITRCIGTTPEVVVHNLLEVQRAT 1803
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A1V9ZXF6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXF6_9STRA) HSP 1 Score: 218 bits (556), Expect = 2.760e-53 Identity = 126/337 (37.39%), Postives = 194/337 (57.57%), Query Frame = 1
Query: 5533 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFRYET------KQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 6522
YV +GTG+ P GED+ +GRL+++E+DYA G + V KL+ ++AKE + G +S V QLG +++ +VG K+IV ++ K L F D ++Y++SL+VIK FIL GD Y S + W + L L+KD E+ V S E + + + +V +D N+ V+Q+ P++ SRGG +LL SD ++G+R+ + R+R + A Y L +T +GG+ V+ PV E+ FRRLY LQ IM NAL HN NP + + T R + K+ LD +++ R++ LD Q +L R IGTT D V+ NLL++ ++LF
Sbjct: 1203 YVVIGTGIVSPNGEDENGKGRLLVYEIDYAQYTDVHGVTGNKVPKLKLIYAKEH------KQGAISMVKQLGIYVLAAVGSKLIV--YELKNNQLVGCAFFDAQLYIVSLNVIKSTFILYGDIYKSTYFLQWNPTEKRLVLLAKDFENLNVVSTEISVLDSRLGVVASDMLSNLHVMQFVPSSIESRGGQRLLRTSDFHVGARITTMLRKRLESKI---AIYVTLLATAEGGVNVLTPVYEKSFRRLYTLQTIMINALPHNAGLNPREFRQALHNQLTGRQDAWCKWKGKKAFLDMAVIGRYIDLDYVAQRELARCIGTTADVVLHNLLELQRSTLF 1528
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A485L0M5_9STRA (Aste57867_14310 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0M5_9STRA) HSP 1 Score: 218 bits (555), Expect = 3.410e-53 Identity = 128/337 (37.98%), Postives = 197/337 (58.46%), Query Frame = 1
Query: 5533 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDG-KHEHAVKLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFR------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 6522
YV +GTG+ P GED+ +GRL+++EVDYA G + KL+ ++AKE + G +S V+QLG +++ +VG K+IV ++ K L F D ++Y++SL+VIK +IL GD Y SV ++W+ ++ ++ L+KD+E + + E + + + ++ D + NV VLQY P SRGG +LL SD ++G+RV L R+R + Y L +T +GG+GV++PV ER+FRRLY LQ IM NAL N NP + T R ++ K+ LD +++ RF LD Q +L R IGTT + VM NLL++ ++LF
Sbjct: 1157 YVIIGTGVVGPNGEDENGKGRLLVYEVDYAQYTNAQGVTGKKLPKLKLIYAKEH------KQGGISMVSQLGAYVLAAVGSKLIV--YELKGGQLVGCAFFDAQLYIVSLNVIK-SYILYGDLYKSVHFLLWKPQEKTIIMLAKDYEPLSLTTTEVSVMDTQLGLIACDMQSNVHVLQYEPTHVESRGGQRLLRTSDFHVGARVTSLLRKRVVES--PFPFYVTLLATAEGGIGVLIPVQERLFRRLYTLQSIMINALPQNAGLNPREFRQAVHTRSTGRPDAWCTWKAKKAFLDTAVIGRFSDLDYVAQRELARCIGTTPEVVMHNLLELQRSTLF 1482
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A024UE49_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UE49_9STRA) HSP 1 Score: 218 bits (554), Expect = 4.520e-53 Identity = 132/337 (39.17%), Postives = 192/337 (56.97%), Query Frame = 1
Query: 5533 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFR------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 6522
YV VGTG+ P GED+ +GRL+++EVDYA G + KL+QV+AK+ + G +S V+QLG +++ +VG K+IV ++ K L F D ++Y++SL+VIK FIL GD Y SV + W+ ++ S+ L+KD E + + E + + ++ D + NV VLQY P SRGG KLL SD +LG+RV L R+R Y L +T +GG+GV++PV ER+FRR+Y LQ IM N L N NP + T R ++ K+ LD S++ RF LD Q +L R IGTT + V+ NLL++ +LF
Sbjct: 1164 YVVVGTGVVGPNGEDENGKGRLLVYEVDYAQYTSAHGVTGRKLPKLKQVYAKDH------KQGGISMVSQLGAYVLAAVGSKLIV--YELKGGQLVGCAFFDAQLYIVSLNVIK-SFILYGDIYKSVHFLHWKPQEKSIIMLAKDTEPLDITATEVSVMNSQLGLIACDLQSNVHVLQYEPTHVESRGGQKLLRTSDFHLGTRVTSLLRKRVLDC--PFPLYVTLLATAEGGVGVLIPVQERLFRRMYTLQSIMVNVLPQNAGLNPREFRQALHTRSTGRPDAWCTWKAKKAFLDFSVIGRFSDLDYVAQRELARCIGTTPEVVLHNLLELQRTTLF 1489 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.664.1 >prot_Ecto-sp6_S_contig10.664.1 ID=prot_Ecto-sp6_S_contig10.664.1|Name=mRNA_Ecto-sp6_S_contig10.664.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=2175bp MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRback to top mRNA from alignment at Ecto-sp6_S_contig10:2536803..2556475+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.664.1 ID=mRNA_Ecto-sp6_S_contig10.664.1|Name=mRNA_Ecto-sp6_S_contig10.664.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=19673bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2536803..2556475+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:2536803..2556475+ >mRNA_Ecto-sp6_S_contig10.664.1 ID=mRNA_Ecto-sp6_S_contig10.664.1|Name=mRNA_Ecto-sp6_S_contig10.664.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=6525bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2536803..2556475+ (Ectocarpus species6 EcLAC_371)back to top |