prot_Ecto-sp6_S_contig10.657.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig10.657.1
Unique Name	prot_Ecto-sp6_S_contig10.657.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	333

Homology

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BLAST of mRNA_Ecto-sp6_S_contig10.657.1 vs. uniprot
Match: D7G8W0_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W0_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 5.090e-203
Identity = 294/301 (97.67%), Postives = 299/301 (99.34%), Query Frame = 0

Query:   32 MTSADVFGDLTVQVLRGINLQNLKAFGTCNPYVLLKMTSSPETKTTGVRESDANPSWHESFIFRNVASTDALQISLMEKEGSREGVVSVRGGVRATEWGFPGIGGGERVLEVTMPCTTDTTGVPNMGTVVLKLQYRAQLKFRAPFGVIKTAAAKTAILTDKAKIDVVVDKVMNVLFKPVAMAEGVAKRLTKAQKIVYGGSAAAVSSAVGGGASMTLLVLAVPVLFMALLFLPLTLMGGFFLAVAMLVIMPCVLALGWVVLCSRPVQCRVWMPWLFWAMCKSPLVHKALLQPPPHSPSGTQQ 332
            M SADVFGDLTVQVLRGINLQNLKAFGTCNPYVLLKMTSSPETKTTGVRESDANPSWHE+FIFRNVASTDALQISLMEKEGSREGVVSVRGGVRATEWGFPG+GGGERVLEVTMPCTTDTTGVPNMGTVVLKLQYRAQLKFRAPFGVIKTAAAKTAILTDKAKIDVVVDKVMNVLFKPVAMAEGVAKRLTKAQKI+YGGSAAAVSSAVGGGASMTLL LAVPVLFMALLFLPLTLMGGFFLAVAMLVIMPCVLALGWVVLCSRPVQCRVWMPWLFWAMCKSP++HKALLQPPPHSPSGTQQ
Sbjct:    1 MASADVFGDLTVQVLRGINLQNLKAFGTCNPYVLLKMTSSPETKTTGVRESDANPSWHETFIFRNVASTDALQISLMEKEGSREGVVSVRGGVRATEWGFPGVGGGERVLEVTMPCTTDTTGVPNMGTVVLKLQYRAQLKFRAPFGVIKTAAAKTAILTDKAKIDVVVDKVMNVLFKPVAMAEGVAKRLTKAQKIIYGGSAAAVSSAVGGGASMTLLALAVPVLFMALLFLPLTLMGGFFLAVAMLVIMPCVLALGWVVLCSRPVQCRVWMPWLFWAMCKSPILHKALLQPPPHSPSGTQQ 301

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig10.657.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig10.657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G8W0_ECTSI	5.090e-203	97.67	C2 domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 40..136 e-value: 1.4E-4 score: 31.2
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 39..112 e-value: 2.1E-10 score: 40.8
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 41..125 score: 11.3
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150		coord: 39..124 e-value: 8.1E-13 score: 50.5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..244
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 265..269
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 245..264
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 270..292
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 293..332
None	No IPR available	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 28..110
None	No IPR available	TMHMM	TMhelix		coord: 226..260
None	No IPR available	TMHMM	TMhelix		coord: 270..292

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig10	contig	Ecto-sp6_S_contig10:2450002..2455981 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig10.657.1	mRNA_Ecto-sp6_S_contig10.657.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig10 2450002..2455981 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig10.657.1 ID=prot_Ecto-sp6_S_contig10.657.1|Name=mRNA_Ecto-sp6_S_contig10.657.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=333bp
QEELLATSDSCCHWSHWFSGGSRNKTHTIHIMTSADVFGDLTVQVLRGIN
LQNLKAFGTCNPYVLLKMTSSPETKTTGVRESDANPSWHESFIFRNVAST
DALQISLMEKEGSREGVVSVRGGVRATEWGFPGIGGGERVLEVTMPCTTD
TTGVPNMGTVVLKLQYRAQLKFRAPFGVIKTAAAKTAILTDKAKIDVVVD
KVMNVLFKPVAMAEGVAKRLTKAQKIVYGGSAAAVSSAVGGGASMTLLVL
AVPVLFMALLFLPLTLMGGFFLAVAMLVIMPCVLALGWVVLCSRPVQCRV
WMPWLFWAMCKSPLVHKALLQPPPHSPSGTQQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom
IPR035892	C2_domain_sf