prot_Ecto-sp6_S_contig10.647.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.647.1
Unique Nameprot_Ecto-sp6_S_contig10.647.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length814
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE)

HSP 1 Score: 1527 bits (3953), Expect = 0.000e+0
Identity = 781/813 (96.06%), Postives = 793/813 (97.54%), Query Frame = 0
Query:    1 MRSLILVQLLLCQAIICAEAGINGFHKWFVEEFPTAVTDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVELASEDKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELTEFHDDSHSSGAWKVVYLDLAARQRTPPAPPPPSKDFPPLDRSRRSNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALHGSGKPEGGRRRRGPGGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGGGEDAAPDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGKMATRRSHCRLLL 813
            MR+LILVQLLLCQAIICAEAGINGFHKWFV+EFPTAVTDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPP KSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFM+DVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHR        DNFL+DGDKKSICWEFLQDLLADMIPSIVAEAE YLAVSLEQMDLNNRYPPAGSVFKMAVQQG+LGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLD+DSGAENGRE  SRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWV+LASEDKLAN AVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQEL+EFHD +HSS AWKVVYLDL+ARQRTPPAPPPPSKDFPPLD SR SNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKAL+GSGKPEGGRRRRG  GKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNG GEDAAPDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGK+ATRRSHCRLLL
Sbjct:    1 MRALILVQLLLCQAIICAEAGINGFHKWFVQEFPTAVTDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHR--------DNFLIDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDEDSGAENGRERGSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDGAHSSCAWKVVYLDLSARQRTPPAPPPPSKDFPPLDSSRHSNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALNGSGKPEGGRRRRGSAGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDAAPDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGKLATRRSHCRLLL 805          
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A836C8H5_9STRA (DRBM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H5_9STRA)

HSP 1 Score: 290 bits (742), Expect = 2.650e-81
Identity = 266/915 (29.07%), Postives = 369/915 (40.33%), Query Frame = 0
Query:   14 AIICAEAGINGFHKWFVEEFPTAV--TDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQEC------------------------------------------------------------------------------------------------------------------------------TRPCYQG---------------------------VKFYISGANVPGEGELKCIDWLK---HMPKP-----------------------------------DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSD--NFLVDGDKKSICWEFLQDLLADMIPSIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIE--------VHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFL---EQEKARILEQAQ---------------------LDQENEDIDSNLDKDSGA-ENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVE--LASE--------DKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPL----------LEALEWRGVSSGL-------DIAKILKTCQNLMPQELTEFHDDSHSSGAWKVVYLDLAARQR--TPPAPPPPSKDFPPLDRSRRSNSYKFQRIQVTSMSATSAPRNLPW 671
            A+   EAGI GF KWF   F  +V      + + FDHVC DMNQILHVA+R++ +E+ AI R F +++  LK   P +SVVFAFDGSAPLAKLL QR+RRE  +R  +Y+MSAL+++PGT FM   A AM YYA+                                                                                                                                  RP Y+G                           V +Y+  A+V GEGELK +DW       P+                                    +ES VIVGGDADL+LQGLALS+VKN F+ +     S R+ S+W+V R LEAMFPG+S  +R DL  L++LNGNDYLPKVRGVSF RCF+ Y A K         A P    +F++D +++   W FL   L           +           +  +    G   K  ++ G+                 +D+  E    +G + ++     V G   T    H  +K      AA  +L+EL P+LY+++L   ++  A++L  AQ                      D    D+D N D+ S   E   E     GK    DV+++L GVLWN+ MY DG+ P+ YWRY  RY+PSC D+  WVE  +A E          L + A PV   P LP+ +ACL M  M+  G+  +P+RL+ L+   SP+                   ++G+       DI  +L    +  P+ L  F +       W V+        R  TP   PPP    PPLDR  +        ++  +M ATS+P    W
Sbjct:   15 ALQLCEAGIQGFSKWFKGVFHDSVMAVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRP-YRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAK---------AAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGR--KKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDA-RRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGG-HDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAM--MSAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAE-GRQEVKWTVIQHASQPLPRGCTPLNLPPP---IPPLDRFLK---VSPDTVKCVTMPATSSPPGRSW 906          
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: M1US37_CYAM1 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US37_CYAM1)

HSP 1 Score: 274 bits (700), Expect = 2.250e-77
Identity = 227/747 (30.39%), Postives = 345/747 (46.18%), Query Frame = 0
Query:   21 GINGFHKWFVEEFPTAV---TDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRR--------ENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFI-----------------CSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALK--RGKHRGVLLALPSDNFLVDGDKKSICWEFL----QDLLADMIPSIVAEA-ESYLAVSLEQMDLNNRYPPAG--SVFKMAVQQGRLGDGVEIEVH--DLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVELASEDKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLD-IAKIL---------KTCQNLMPQELTEFHDDSH-----------SSGAWKVVYLDLA--------ARQRTPPAPPPPSKDFPPLDRSRRSNSYKFQRIQVTSMSATSAPRNLPWSSASDSS---SEEMQGVLDLPYKKAL 694
            GI GF +W++E FP+ V   T  S  E FDHV  D+NQ++H+A R AR+ D    R+FR ++  L+ C P KSV  AFDG APLAKL+ Q+ RR           KR  +  +  L LSPGT+ M+    A+E+Y     +  R  YQ V+F +SG  VPGEGE+K ID++     P  S V++G DADL++ GLA  +V+N F+                   +  A S  + S+W+ +R L+  FPG++  +R+DL V++M+ GNDYLPK+RG SF+  ++AY+ALK  +G  RG         +LV  +++S  WEFL    + L+  ++P++  E  E Y   S+   +   R   AG  SV   +  +    D VE  VH  DL D                              G +    H        E+  D+ D     EK  I E   +D + +                          L+D E +L  +LW L MYIDG+ P+FY  YS  Y PS +DIV W++    D L     P+  APPLP   A L ++P +       P   + L+R       +     + +  D  AK++         +T ++L+ + +    DD +           SS A+ +   D++        +++R P  P PP + F  L  S     +  + +Q+TS   T   R+  WS+    +   S++   V +L YK+  
Sbjct:    2 GIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRYVDPQHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKLDKGPMRG--------KYLVCREQRSFDWEFLYALMKRLINPLVPNLTKELIEMYREASIRGQEAL-RLAQAGNASVEASSSCESESKDSVERNVHPSDLED------------------------------GTEPDAAH-------GEISADVTDPEDILEKVDIPEGISVDDDEK--------------------------LYDTEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGDPLLQLQPPLSVAPPLPPHAALLALVPASAARLLPQPIFKRVLLRSQQQAENSESAAEMGTNADETAKLITFILQDDGRRTNRSLLLRVVEGIRDDEYEEIEKHRTRLSSSVAFALRQGDMSGNGRTCASSQERAPKLPEPPVQRFAKLSLSGAE--FSIEGVQLTS---TPPCRSWCWSTDGTEARRTSKKAVSVQNLSYKRVF 671          
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A7J7IHE6_9RHOD (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD)

HSP 1 Score: 263 bits (673), Expect = 1.540e-73
Identity = 179/571 (31.35%), Postives = 292/571 (51.14%), Query Frame = 0
Query:   21 GINGFHKWFVEEFP---TAVTDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMS--------ALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFI-----------CSQTDAGSYRLS------SIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVELASEDKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRL 561
            GI GF +WF+E FP   T +TD +  ESFDHV  D+NQ++H+A R A++ D    R++R ++  L+ C P +SV  AFDG APLAKL+ Q+ RR    R    ++          L LSPGT+ M+    A+E+Y     +  R  Y+ ++F +SG  VPGEGE+K ID++    +P  S +++G DADL+L GLA  ++++ F+            S+  A ++R S      S+W+ +R L+ +FPG++A VR+DLA+L+M+ GNDY+PK+RG SF   + AY+ALK    +G +    S  +L+ G++++I  EFL  L++ +   +V +    L                  +++ A  +G+       E+  L++  S  +G T+   + +    ++  Y+   + K         E +++   PD   E +E  +        +  +N++                         +FD E++L  +LW L MY+DG+ P+FY+ Y   Y PS  DIV W++    D +     P+  APPLP   A L ++P T      LP+ L
Sbjct:    2 GIAGFQRWFLETFPSTATTITDETLPESFDHVLFDLNQLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKLEPKKRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRCVEPHHSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKM--RQGPM----SGRYLLCGEQRTINLEFLYALMSSLENPLVPQLTKQLV----------------EMYREASIRGQ-------EMARLAELESTRTGATETPDNDSISDVEQILYNG-DLEKPSPCKETTKEPVIDMTDPDDMLEMVETPEG-------VSYDNDET------------------------MFDTENWLRMLLWALAMYVDGFCPDFYFTYPKPYGPSATDIVRWLQEIDGDPIPTLQPPMSVAPPLPPHAALLALIPST--AAKLLPRPL 509          
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC)

HSP 1 Score: 234 bits (597), Expect = 8.550e-68
Identity = 124/243 (51.03%), Postives = 165/243 (67.90%), Query Frame = 0
Query:   53 MNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHM--PKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLS-------------SIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALK 279
            MN +LH A RKA+D +HAI R++++++ TL+   P KSVV AFDG  PLAKLL QR RR  S + SKY++S LH++PGTKFM+ +  A EYYA         ++ V FYISGA+V GEGE+K I+W+ ++   + DE  +IVGGDADL+LQGLA+  VK+ F+ +  D   +  S             S+WEVVRSLE +FPGQS  VR DL VL+++NGNDYLPKVRG SF   F+AY+ +K
Sbjct:    1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243          
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD)

HSP 1 Score: 239 bits (609), Expect = 7.160e-65
Identity = 205/673 (30.46%), Postives = 320/673 (47.55%), Query Frame = 0
Query:   47 DHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHL-----SPGTKFMEDVASAMEYYAFQECTR----PCYQGVKFYISGANVPGEGELKCIDWLKHMPKP-----------DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWV-------ELASEDKLANFAV---PVIGAP------------PLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGL-DIAKILKTCQNLMPQELTEFHDDSHSSGAWKVVYLDLAARQRTPPA-PPPPSKDFPPLDRSRRSNSYKFQRIQVTSMSATSAPRNLPWSSAS 675
            DHVC D+NQ++H+A+RK+ +E+  + R+FR+++  LK+C P +SV FAFDG  P+AKLL QR RR N   + +  ++  H+     +PGT+ M  +  A++Y+A   C+R      Y  V   ISG +VPGEGE+K  DWL                  ES +++GGDAD++LQGLA +  ++ F+ +Q+      + SI  +V++LE  FPG+S  VR+D  VL ++NGNDYLPKVRGV F   +  Y A+K+G+ +          +L+D  +++  W FL  LL + I S+V E    LA    Q++  +R                    +  E HD+  + +                        L+ G        +A       +PD+ D+  +         +  D    D +S  D         E ++ +    LFD+E FL G+LWN+QMY+DG+ P++ + Y   Y+PS   I++WV       +  S D   +F+     ++G P            PL    A + MLP +      LP  +Q L    + L  A   R  S  L +++K+L    ++ P+ L     +   +    V  +   +R R     PPPP   F    RS R  S+   R+ VT+   T+AP  L W+SAS
Sbjct:   23 DHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFA---CSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIKKGREQF------QGQYLLDSTRRTFNWPFLVALL-ETIRSVVIEPHVLLAEKSLQVEEPSR--------------------MNEEEHDVPPDPNEI---------------------ILYTGDMTASASTSA------AIPDVDDDEEDHADXXXXXXSVGDDGEYDYESAYD---------ETNTGESPNRLFDIELFLRGILWNVQMYVDGFCPDYTYVYPELYAPSPTAIMNWVKAHDGTVQTNSIDTTPHFSARLDDILGDPLFSIQGPLSTVQPLEPHKAAIAMLPSS--ASHLLPGPIQELGASCTALDRA---RRDSMYLRELSKVLDAVDSI-PRSLYT-RAELRRTRFGNVHLIRKTSRPRAASQLPPPPVARF----RSLRVPSH-LNRMLVTT---TTAPPCLRWTSAS 614          
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR)

HSP 1 Score: 229 bits (585), Expect = 3.250e-61
Identity = 189/574 (32.93%), Postives = 271/574 (47.21%), Query Frame = 0
Query:   21 GINGFHKWFVEEFPTAVT---DASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKY-------------------RMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHMPKPD-ESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYR-----LSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADM-IP-SIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKE-YTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVELASEDKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQ 562
            GI GF KW +  FP  V     A   E +DHV  D+NQILH A+RKA +       IFR+++  LK C P KSV FAFDG APLAKL  QR RR   +  S+Y                    +  L ++PG + +  V  ++EY+A+        Y+ V+  ISGA+VPGEGELK ID+ +    P  +S V+VGGDAD++LQGLA   V+N F+  +  AGS       + S+WE+ R  E +FP +S+ VR+D  +L +LNGNDY+PKVRG+S SR +  Y  LK     G        + LVD +K+++ W     L+  + +P S +AEAE                 PAG      V   R   G E  V     EV          + + +   ++      L      T     +E  + E   D Y++  E            D+E E I + +            S    K   +D   ++  +LWN+QMY+DGY  ++ +RY   Y P   +I++++     D   + A PV    PL    A + +LP   + K  LPK LQ
Sbjct:    2 GIIGFQKWLLGNFPDIVRVQQGARFGEYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIPSTDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRS-LVDAEKRTLNWPMFYALMDRVGVPVSSIAEAEQ-----------EKESTPAG------VPPRRKRRGKEGYVSYSDSEVG---------ERIVYTGNEDGVPMDCLDDDSVPTRDESFSENGVSET--DSYEDSSEYNXXXXX--XXFDEEQEHIQTLVT----------LSGNSSK--FYDTNRWVRALLWNIQMYVDGYCGDYSFRYGKPYGPPITEILNYIRNHDGDPFLHQA-PVSNWRPLLPHQAAMAVLP--KQAKHLLPKPLQ 529          
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: I2CR78_NANGC (5'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC)

HSP 1 Score: 209 bits (532), Expect = 1.030e-55
Identity = 138/345 (40.00%), Postives = 190/345 (55.07%), Query Frame = 0
Query:    3 SLILVQLLLCQAIICAEAGINGFHKWFVEEFPTAVTDASRVE--SFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWL-------------------------KHMPKPDESAVIVGGDADLILQGLALSEVK--NTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADM 316
            SL+L+ LLL   +   E GI GF KWF   +   V+  S  +   FDHV ID+NQ+ H+A RKARDEDHAIRR+ +++  TL+     KSVV AFDG APLAK++ QR RR   K ++K  +++LHLSPGT FM   A A+  +     E      + +++Y+S +  PGEGE+K +DW+                         K   K  ES V+VGGDADL+LQGLAL  +   N FI     +G +   S+ + V  LE  FPGQS  VR D+ +L+++ GNDYL KVRG++F     AY  +KR            D F++  + K+  W FLQ    D+
Sbjct:   48 SLVLL-LLLFTILPFVEGGIYGFWKWFRGHYKEVVSKVSSEQYAEFDHVLIDVNQLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRAAEK-DAKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALPGLPDFNVFIPDVKRSGYF--VSLRQFVARLETDFPGQSHQVRTDMVLLLVMAGNDYLKKVRGLTFRSKLLAYNNVKRKPEF-------KDQFMLLAENKTFNWPFLQAFYDDL 381          
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A7S0E673_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E673_9CRYP)

HSP 1 Score: 177 bits (449), Expect = 1.010e-47
Identity = 88/177 (49.72%), Postives = 124/177 (70.06%), Query Frame = 0
Query:   44 ESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHM--PKPDESAVIVGGDADLILQGLALSEVKNTFICSQTD 217
            E F+HV  DMN +LH A R+A+D +HAI +++++++ TL+   P KSVV AFDG  PLAKLL QR RR  S ++SKY++S LH++PGTKFM  +  A EYYA         ++ V FYISG++V GEGE+K IDW+ ++   + D+  +IVGGDADL+LQGLA+  VK+ F+ +  D
Sbjct:    2 EEFEHVLFDMNGLLHTACRRAKDFEHAILKVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRSKSSKSSKYKLSGLHITPGTKFMHAMKQACEYYAALRLVASAKFRNVAFYISGSDVAGEGEIKIIDWIHNLLHSQNDDRLIIVGGDADLVLQGLAVLRVKDLFVYAGKD 178          
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A1Z5JMH0_FISSO (5'-3' exoribonuclease 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMH0_FISSO)

HSP 1 Score: 190 bits (482), Expect = 1.450e-46
Identity = 181/610 (29.67%), Postives = 284/610 (46.56%), Query Frame = 0
Query:    1 MRSLILVQLLLCQAIICAEAGINGFHKWFVEEFPTAVTDASR---VESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRR-------ENSKRNSKYR--------------MSALHLSPGTKFMEDVASAMEYYAFQECTR--PCY-QGVKFYISGANVPGEGELKCIDWL-KHMPKP---DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLE----AMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVS-FSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIP---SIVAEAESYLAVSLEQMDLNNRYP-PAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSG--GTKKWKSVTWVR---GKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEF---------LEQEKARILEQAQLDQ-ENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPR-YSPSCADIVSWVELASEDKLANFAVPVIG-----APPLPASIACLCMLPM 549
            M S + +Q    +A++    GI GF  W    +P A+    R    E+FDHV ID+NQ LH+ +R +R ++HA+  + ++++L ++   P KS+V A DG    AKL  QR RR       E + +  K R                 L L+P TKFM+ V  A+ Y+ +Q  +    C  +GV  YIS ++ PGEGE+K ++WL +H  +P   +ES  ++GGDADL+++GL L+   N F         +   S+W++ R L       +  +    R+D  +LI+LNGNDY+ K+RG S F+R  +AY  + R    G L+ + S +F +D      C EF Q+L  ++ P   +   E ++ L+  L Q       P P     K+ V     G     E  D + +   +S   G  +   V+      G + +      GK + V+ L       +   D Y EF         L+  K R+   A  +    ++I+  LD              +GK    DV  +L G+LW LQ Y DG   ++ ++Y  R  +PS  D+V + E A   K A  ++ +        PP+ A IACL  LP+
Sbjct:    1 MHSFVALQRSQQRALLHPLHGIRGFRTWLESTYPDAIYPIRRNQDQENFDHVLIDLNQFLHIIVRNSRSDEHALLLLMKELDLLIQMATPTKSLVLAIDGPPSAAKLATQRQRRLEKIIKVERTLKRLKQRPLRVARRKRSILGDTRVLALTPSTKFMKSVEQALLYWTWQRLSNRNSCLPEGVHVYISPSSAPGEGEVKLLEWLYRHASQPHQINESVALLGGDADLVVEGLMLNR-PNVFCLLPHVKKQFSCVSVWQLTRDLARKTGVQYADELPQRRLDWVLLILLNGNDYVNKLRGSSGFNRLMKAYSKVLRHYPNGGLVVIESLDFQLD-----FCIEFFQELSRNLQPFSETSADECDTCLS-KLYQFAATGYLPQPVNFEIKLDVIDENNGVNTNKEDDDEAFDYEANSLFLGLDEEDDVSETGFDIGYDESDENDTTGKNELVLQLG------DPASDDYYEFSAWVPQGHKLKGAKQRLASVALRELLVTDEIEFVLDD----------MKVRGKMIECDVPLYLYGLLWTLQTYQDGACADYGFQYGDRRLAPSAKDLVEYFEQA---KAAGRSIGISSLRNGYTPPVAAGIACLAALPL 584          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZW9_9PHAE0.000e+096.06XRN_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836C8H5_9STRA2.650e-8129.07DRBM domain-containing protein n=1 Tax=Tribonema m... [more]
M1US37_CYAM12.250e-7730.39XRN_N domain-containing protein n=1 Tax=Cyanidiosc... [more]
A0A7J7IHE6_9RHOD1.540e-7331.35XRN_N domain-containing protein n=1 Tax=Cyanidioco... [more]
L1JQ07_GUITC8.550e-6851.03Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S1TFG2_9RHOD7.160e-6530.46Hypothetical protein n=4 Tax=Compsopogon caeruleus... [more]
A0A2V3J5K0_9FLOR3.250e-6132.935'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
I2CR78_NANGC1.030e-5540.005'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannoch... [more]
A0A7S0E673_9CRYP1.010e-4749.72Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A1Z5JMH0_FISSO1.450e-4629.675'-3' exoribonuclease 1 n=1 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004859Putative 5-3 exonucleasePFAMPF03159XRN_Ncoord: 21..207
e-value: 2.8E-33
score: 115.3
NoneNo IPR availableGENE3D3.40.50.12390coord: 121..233
e-value: 4.8E-12
score: 47.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..813
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.815
IPR0164945'-3' exoribonuclease 1PANTHERPTHR12341:SF75'-3' EXORIBONUCLEASE 1coord: 21..565
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 21..565

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:2364649..2378370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.647.1mRNA_Ecto-sp6_S_contig10.647.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 2364594..2378923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.647.1 ID=prot_Ecto-sp6_S_contig10.647.1|Name=mRNA_Ecto-sp6_S_contig10.647.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=814bp
MRSLILVQLLLCQAIICAEAGINGFHKWFVEEFPTAVTDASRVESFDHVC
IDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAP
LAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECT
RPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQ
GLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAV
LIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGD
KKSICWEFLQDLLADMIPSIVAEAESYLAVSLEQMDLNNRYPPAGSVFKM
AVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHV
GKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSN
LDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWR
YSPRYSPSCADIVSWVELASEDKLANFAVPVIGAPPLPASIACLCMLPMT
DRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQE
LTEFHDDSHSSGAWKVVYLDLAARQRTPPAPPPPSKDFPPLDRSRRSNSY
KFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALHGSGKP
EGGRRRRGPGGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDA
RRGTNGGGEDAAPDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLG
KMATRRSHCRLLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004859Put_53exo
IPR0164945_3_exoribonuclease_1
IPR0270735_3_exoribonuclease