mRNA_Ecto-sp6_S_contig10.647.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE) HSP 1 Score: 1529 bits (3958), Expect = 0.000e+0 Identity = 781/813 (96.06%), Postives = 793/813 (97.54%), Query Frame = 2
Query: 56 MRSLILVQLLLCQAIICAEAGINGFHKWFVEEFPTAVTDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVELASEDKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELTEFHDDSHSSGAWKVVYLDLAARQRTPPAPPPPSKDFPPLDRSRRSNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALHGSGKPEGGRRRRGPGGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGGGEDAAPDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGKMATRRSHCRLLL 2494
MR+LILVQLLLCQAIICAEAGINGFHKWFV+EFPTAVTDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPP KSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFM+DVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHR DNFL+DGDKKSICWEFLQDLLADMIPSIVAEAE YLAVSLEQMDLNNRYPPAGSVFKMAVQQG+LGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLD+DSGAENGRE SRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWV+LASEDKLAN AVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQEL+EFHD +HSS AWKVVYLDL+ARQRTPPAPPPPSKDFPPLD SR SNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKAL+GSGKPEGGRRRRG GKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNG GEDAAPDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGK+ATRRSHCRLLL
Sbjct: 1 MRALILVQLLLCQAIICAEAGINGFHKWFVQEFPTAVTDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHR--------DNFLIDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDEDSGAENGRERGSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDGAHSSCAWKVVYLDLSARQRTPPAPPPPSKDFPPLDSSRHSNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALNGSGKPEGGRRRRGSAGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDAAPDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGKLATRRSHCRLLL 805
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A836C8H5_9STRA (DRBM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H5_9STRA) HSP 1 Score: 290 bits (743), Expect = 6.180e-80 Identity = 267/920 (29.02%), Postives = 370/920 (40.22%), Query Frame = 2
Query: 80 LLLCQAIICAEAGINGFHKWFVEEFPTAV--TDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQEC------------------------------------------------------------------------------------------------------------------------------TRPCYQG---------------------------VKFYISGANVPGEGELKCIDWLK---HMPKP-----------------------------------DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSD--NFLVDGDKKSICWEFLQDLLADMIPSIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIE--------VHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFL---EQEKARILEQAQ---------------------LDQENEDIDSNLDKDSGA-ENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVE--LASE--------DKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPL----------LEALEWRGVSSGL-------DIAKILKTCQNLMPQELTEFHDDSHSSGAWKVVYLDLAARQR--TPPAPPPPSKDFPPLDRSRRSNSYKFQRIQVTSMSATSAPRNLPW 2068
L A+ EAGI GF KWF F +V + + FDHVC DMNQILHVA+R++ +E+ AI R F +++ LK P +SVVFAFDGSAPLAKLL QR+RRE +R +Y+MSAL+++PGT FM A AM YYA+ RP Y+G V +Y+ A+V GEGELK +DW P+ +ES VIVGGDADL+LQGLALS+VKN F+ + S R+ S+W+V R LEAMFPG+S +R DL L++LNGNDYLPKVRGVSF RCF+ Y A K A P +F++D +++ W FL L + + + G K ++ G+ +D+ E +G + ++ V G T H +K AA +L+EL P+LY+++L ++ A++L AQ D D+D N D+ S E E GK DV+++L GVLWN+ MY DG+ P+ YWRY RY+PSC D+ WVE +A E L + A PV P LP+ +ACL M M+ G+ +P+RL+ L+ SP+ ++G+ DI +L + P+ L F + W V+ R TP PPP PPLDR + ++ +M ATS+P W
Sbjct: 10 LACLMALQLCEAGIQGFSKWFKGVFHDSVMAVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRP-YRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAK---------AAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGR--KKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDA-RRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGG-HDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAM--MSAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAE-GRQEVKWTVIQHASQPLPRGCTPLNLPPP---IPPLDRFLK---VSPDTVKCVTMPATSSPPGRSW 906
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: M1US37_CYAM1 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US37_CYAM1) HSP 1 Score: 274 bits (700), Expect = 5.260e-76 Identity = 227/747 (30.39%), Postives = 345/747 (46.18%), Query Frame = 2
Query: 116 GINGFHKWFVEEFPTAV---TDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRR--------ENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFI-----------------CSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALK--RGKHRGVLLALPSDNFLVDGDKKSICWEFL----QDLLADMIPSIVAEA-ESYLAVSLEQMDLNNRYPPAG--SVFKMAVQQGRLGDGVEIEVH--DLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVELASEDKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLD-IAKIL---------KTCQNLMPQELTEFHDDSH-----------SSGAWKVVYLDLA--------ARQRTPPAPPPPSKDFPPLDRSRRSNSYKFQRIQVTSMSATSAPRNLPWSSASDSS---SEEMQGVLDLPYKKAL 2137
GI GF +W++E FP+ V T S E FDHV D+NQ++H+A R AR+ D R+FR ++ L+ C P KSV AFDG APLAKL+ Q+ RR KR + + L LSPGT+ M+ A+E+Y + R YQ V+F +SG VPGEGE+K ID++ P S V++G DADL++ GLA +V+N F+ + A S + S+W+ +R L+ FPG++ +R+DL V++M+ GNDYLPK+RG SF+ ++AY+ALK +G RG +LV +++S WEFL + L+ ++P++ E E Y S+ + R AG SV + + D VE VH DL D G + H E+ D+ D EK I E +D + + L+D E +L +LW L MYIDG+ P+FY YS Y PS +DIV W++ D L P+ APPLP A L ++P + P + L+R + + + D AK++ +T ++L+ + + DD + SS A+ + D++ +++R P P PP + F L S + + +Q+TS T R+ WS+ + S++ V +L YK+
Sbjct: 2 GIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRYVDPQHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKLDKGPMRG--------KYLVCREQRSFDWEFLYALMKRLINPLVPNLTKELIEMYREASIRGQEAL-RLAQAGNASVEASSSCESESKDSVERNVHPSDLED------------------------------GTEPDAAH-------GEISADVTDPEDILEKVDIPEGISVDDDEK--------------------------LYDTEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGDPLLQLQPPLSVAPPLPPHAALLALVPASAARLLPQPIFKRVLLRSQQQAENSESAAEMGTNADETAKLITFILQDDGRRTNRSLLLRVVEGIRDDEYEEIEKHRTRLSSSVAFALRQGDMSGNGRTCASSQERAPKLPEPPVQRFAKLSLSGAE--FSIEGVQLTS---TPPCRSWCWSTDGTEARRTSKKAVSVQNLSYKRVF 671
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A7J7IHE6_9RHOD (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD) HSP 1 Score: 263 bits (673), Expect = 2.900e-72 Identity = 179/571 (31.35%), Postives = 292/571 (51.14%), Query Frame = 2
Query: 116 GINGFHKWFVEEFP---TAVTDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMS--------ALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFI-----------CSQTDAGSYRLS------SIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVELASEDKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRL 1738
GI GF +WF+E FP T +TD + ESFDHV D+NQ++H+A R A++ D R++R ++ L+ C P +SV AFDG APLAKL+ Q+ RR R ++ L LSPGT+ M+ A+E+Y + R Y+ ++F +SG VPGEGE+K ID++ +P S +++G DADL+L GLA ++++ F+ S+ A ++R S S+W+ +R L+ +FPG++A VR+DLA+L+M+ GNDY+PK+RG SF + AY+ALK +G + S +L+ G++++I EFL L++ + +V + L +++ A +G+ E+ L++ S +G T+ + + ++ Y+ + K E +++ PD E +E + + +N++ +FD E++L +LW L MY+DG+ P+FY+ Y Y PS DIV W++ D + P+ APPLP A L ++P T LP+ L
Sbjct: 2 GIAGFQRWFLETFPSTATTITDETLPESFDHVLFDLNQLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKLEPKKRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRCVEPHHSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKM--RQGPM----SGRYLLCGEQRTINLEFLYALMSSLENPLVPQLTKQLV----------------EMYREASIRGQ-------EMARLAELESTRTGATETPDNDSISDVEQILYNG-DLEKPSPCKETTKEPVIDMTDPDDMLEMVETPEG-------VSYDNDET------------------------MFDTENWLRMLLWALAMYVDGFCPDFYFTYPKPYGPSATDIVRWLQEIDGDPIPTLQPPMSVAPPLPPHAALLALIPST--AAKLLPRPL 509
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC) HSP 1 Score: 234 bits (597), Expect = 8.140e-67 Identity = 124/243 (51.03%), Postives = 165/243 (67.90%), Query Frame = 2
Query: 212 MNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHM--PKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLS-------------SIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALK 892
MN +LH A RKA+D +HAI R++++++ TL+ P KSVV AFDG PLAKLL QR RR S + SKY++S LH++PGTKFM+ + A EYYA ++ V FYISGA+V GEGE+K I+W+ ++ + DE +IVGGDADL+LQGLA+ VK+ F+ + D + S S+WEVVRSLE +FPGQS VR DL VL+++NGNDYLPKVRG SF F+AY+ +K
Sbjct: 1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD) HSP 1 Score: 239 bits (609), Expect = 7.780e-64 Identity = 205/673 (30.46%), Postives = 320/673 (47.55%), Query Frame = 2
Query: 194 DHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHL-----SPGTKFMEDVASAMEYYAFQECTR----PCYQGVKFYISGANVPGEGELKCIDWLKHMPKP-----------DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWV-------ELASEDKLANFAV---PVIGAP------------PLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGL-DIAKILKTCQNLMPQELTEFHDDSHSSGAWKVVYLDLAARQRTPPA-PPPPSKDFPPLDRSRRSNSYKFQRIQVTSMSATSAPRNLPWSSAS 2080
DHVC D+NQ++H+A+RK+ +E+ + R+FR+++ LK+C P +SV FAFDG P+AKLL QR RR N + + ++ H+ +PGT+ M + A++Y+A C+R Y V ISG +VPGEGE+K DWL ES +++GGDAD++LQGLA + ++ F+ +Q+ + SI +V++LE FPG+S VR+D VL ++NGNDYLPKVRGV F + Y A+K+G+ + +L+D +++ W FL LL + I S+V E LA Q++ +R + E HD+ + + L+ G +A +PD+ D+ + + D D +S D E ++ + LFD+E FL G+LWN+QMY+DG+ P++ + Y Y+PS I++WV + S D +F+ ++G P PL A + MLP + LP +Q L + L A R S L +++K+L ++ P+ L + + V + +R R PPPP F RS R S+ R+ VT+ T+AP L W+SAS
Sbjct: 23 DHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFA---CSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIKKGREQF------QGQYLLDSTRRTFNWPFLVALL-ETIRSVVIEPHVLLAEKSLQVEEPSR--------------------MNEEEHDVPPDPNEI---------------------ILYTGDMTASASTSA------AIPDVDDDEEDHADXXXXXXSVGDDGEYDYESAYD---------ETNTGESPNRLFDIELFLRGILWNVQMYVDGFCPDYTYVYPELYAPSPTAIMNWVKAHDGTVQTNSIDTTPHFSARLDDILGDPLFSIQGPLSTVQPLEPHKAAIAMLPSS--ASHLLPGPIQELGASCTALDRA---RRDSMYLRELSKVLDAVDSI-PRSLYT-RAELRRTRFGNVHLIRKTSRPRAASQLPPPPVARF----RSLRVPSH-LNRMLVTT---TTAPPCLRWTSAS 614
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR) HSP 1 Score: 229 bits (585), Expect = 2.840e-60 Identity = 189/574 (32.93%), Postives = 271/574 (47.21%), Query Frame = 2
Query: 116 GINGFHKWFVEEFPTAVT---DASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKY-------------------RMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHMPKPD-ESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYR-----LSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADM-IP-SIVAEAESYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKE-YTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVELASEDKLANFAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQ 1741
GI GF KW + FP V A E +DHV D+NQILH A+RKA + IFR+++ LK C P KSV FAFDG APLAKL QR RR + S+Y + L ++PG + + V ++EY+A+ Y+ V+ ISGA+VPGEGELK ID+ + P +S V+VGGDAD++LQGLA V+N F+ + AGS + S+WE+ R E +FP +S+ VR+D +L +LNGNDY+PKVRG+S SR + Y LK G + LVD +K+++ W L+ + +P S +AEAE PAG V R G E V EV + + + ++ L T +E + E D Y++ E D+E E I + + S K +D ++ +LWN+QMY+DGY ++ +RY Y P +I++++ D + A PV PL A + +LP + K LPK LQ
Sbjct: 2 GIIGFQKWLLGNFPDIVRVQQGARFGEYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIPSTDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRS-LVDAEKRTLNWPMFYALMDRVGVPVSSIAEAEQ-----------EKESTPAG------VPPRRKRRGKEGYVSYSDSEVG---------ERIVYTGNEDGVPMDCLDDDSVPTRDESFSENGVSET--DSYEDSSEYNXXXXX--XXFDEEQEHIQTLVT----------LSGNSSK--FYDTNRWVRALLWNIQMYVDGYCGDYSFRYGKPYGPPITEILNYIRNHDGDPFLHQA-PVSNWRPLLPHQAAMAVLP--KQAKHLLPKPLQ 529
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: I2CR78_NANGC (5'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC) HSP 1 Score: 211 bits (536), Expect = 1.530e-55 Identity = 138/345 (40.00%), Postives = 190/345 (55.07%), Query Frame = 2
Query: 62 SLILVQLLLCQAIICAEAGINGFHKWFVEEFPTAVTDASRVE--SFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWL-------------------------KHMPKPDESAVIVGGDADLILQGLALSEVK--NTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADM 1003
SL+L+ LLL + E GI GF KWF + V+ S + FDHV ID+NQ+ H+A RKARDEDHAIRR+ +++ TL+ KSVV AFDG APLAK++ QR RR K ++K +++LHLSPGT FM A A+ + E + +++Y+S + PGEGE+K +DW+ K K ES V+VGGDADL+LQGLAL + N FI +G + S+ + V LE FPGQS VR D+ +L+++ GNDYL KVRG++F AY +KR D F++ + K+ W FLQ D+
Sbjct: 48 SLVLL-LLLFTILPFVEGGIYGFWKWFRGHYKEVVSKVSSEQYAEFDHVLIDVNQLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRAAEK-DAKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALPGLPDFNVFIPDVKRSGYF--VSLRQFVARLETDFPGQSHQVRTDMVLLLVMAGNDYLKKVRGLTFRSKLLAYNNVKRKPEF-------KDQFMLLAENKTFNWPFLQAFYDDL 381
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A7S0E673_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E673_9CRYP) HSP 1 Score: 177 bits (449), Expect = 2.270e-47 Identity = 88/177 (49.72%), Postives = 124/177 (70.06%), Query Frame = 2
Query: 185 ESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHM--PKPDESAVIVGGDADLILQGLALSEVKNTFICSQTD 706
E F+HV DMN +LH A R+A+D +HAI +++++++ TL+ P KSVV AFDG PLAKLL QR RR S ++SKY++S LH++PGTKFM + A EYYA ++ V FYISG++V GEGE+K IDW+ ++ + D+ +IVGGDADL+LQGLA+ VK+ F+ + D
Sbjct: 2 EEFEHVLFDMNGLLHTACRRAKDFEHAILKVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRSKSSKSSKYKLSGLHITPGTKFMHAMKQACEYYAALRLVASAKFRNVAFYISGSDVAGEGEIKIIDWIHNLLHSQNDDRLIIVGGDADLVLQGLAVLRVKDLFVYAGKD 178
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Match: A0A1Z5JMH0_FISSO (5'-3' exoribonuclease 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMH0_FISSO) HSP 1 Score: 191 bits (486), Expect = 1.690e-46 Identity = 181/610 (29.67%), Postives = 284/610 (46.56%), Query Frame = 2
Query: 56 MRSLILVQLLLCQAIICAEAGINGFHKWFVEEFPTAVTDASR---VESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPGKSVVFAFDGSAPLAKLLVQRSRR-------ENSKRNSKYR--------------MSALHLSPGTKFMEDVASAMEYYAFQECTR--PCY-QGVKFYISGANVPGEGELKCIDWL-KHMPKP---DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLE----AMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVS-FSRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIP---SIVAEAESYLAVSLEQMDLNNRYP-PAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSG--GTKKWKSVTWVR---GKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEF---------LEQEKARILEQAQLDQ-ENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPR-YSPSCADIVSWVELASEDKLANFAVPVIG-----APPLPASIACLCMLPM 1702
M S + +Q +A++ GI GF W +P A+ R E+FDHV ID+NQ LH+ +R +R ++HA+ + ++++L ++ P KS+V A DG AKL QR RR E + + K R L L+P TKFM+ V A+ Y+ +Q + C +GV YIS ++ PGEGE+K ++WL +H +P +ES ++GGDADL+++GL L+ N F + S+W++ R L + + R+D +LI+LNGNDY+ K+RG S F+R +AY + R G L+ + S +F +D C EF Q+L ++ P + E ++ L+ L Q P P K+ V G E D + + +S G + V+ G + + GK + V+ L + D Y EF L+ K R+ A + ++I+ LD +GK DV +L G+LW LQ Y DG ++ ++Y R +PS D+V + E A K A ++ + PP+ A IACL LP+
Sbjct: 1 MHSFVALQRSQQRALLHPLHGIRGFRTWLESTYPDAIYPIRRNQDQENFDHVLIDLNQFLHIIVRNSRSDEHALLLLMKELDLLIQMATPTKSLVLAIDGPPSAAKLATQRQRRLEKIIKVERTLKRLKQRPLRVARRKRSILGDTRVLALTPSTKFMKSVEQALLYWTWQRLSNRNSCLPEGVHVYISPSSAPGEGEVKLLEWLYRHASQPHQINESVALLGGDADLVVEGLMLNR-PNVFCLLPHVKKQFSCVSVWQLTRDLARKTGVQYADELPQRRLDWVLLILLNGNDYVNKLRGSSGFNRLMKAYSKVLRHYPNGGLVVIESLDFQLD-----FCIEFFQELSRNLQPFSETSADECDTCLS-KLYQFAATGYLPQPVNFEIKLDVIDENNGVNTNKEDDDEAFDYEANSLFLGLDEEDDVSETGFDIGYDESDENDTTGKNELVLQLG------DPASDDYYEFSAWVPQGHKLKGAKQRLASVALRELLVTDEIEFVLDD----------MKVRGKMIECDVPLYLYGLLWTLQTYQDGACADYGFQYGDRRLAPSAKDLVEYFEQA---KAAGRSIGISSLRNGYTPPVAAGIACLAALPL 584 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.647.1 >prot_Ecto-sp6_S_contig10.647.1 ID=prot_Ecto-sp6_S_contig10.647.1|Name=mRNA_Ecto-sp6_S_contig10.647.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=814bp MRSLILVQLLLCQAIICAEAGINGFHKWFVEEFPTAVTDASRVESFDHVCback to top mRNA from alignment at Ecto-sp6_S_contig10:2364594..2378923+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.647.1 ID=mRNA_Ecto-sp6_S_contig10.647.1|Name=mRNA_Ecto-sp6_S_contig10.647.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=14330bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2364594..2378923+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:2364594..2378923+ >mRNA_Ecto-sp6_S_contig10.647.1 ID=mRNA_Ecto-sp6_S_contig10.647.1|Name=mRNA_Ecto-sp6_S_contig10.647.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2442bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2364594..2378923+ (Ectocarpus species6 EcLAC_371)back to top |