prot_Ecto-sp6_S_contig10.636.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.636.1
Unique Nameprot_Ecto-sp6_S_contig10.636.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length1022
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.636.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 895 bits (2312), Expect = 8.570e-311
Identity = 778/1029 (75.61%), Postives = 793/1029 (77.07%), Query Frame = 0
Query:    1 MSAGRRRRVMLESDDEDDAGVGEQGLGEVSVTPHVTPPTAEQTRPSKSRRSMKVIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---QLAERWSKLEEDSDHDLSDGDGDDASGAKRSSLVQLQFHETWGRGSRSSTASRQSRRLVKEPPPSGDEVGDSSDSDDGLGGFIVDSEDEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAAPVVAATFANGGGSSRITRKSGRRKSGANACEIDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDKPVRRSSRAQKGKEVADEEPGSGKRRKTSAVGSEPESAGPSXXXXXXXXXXXXEEFSMQPAGSKKRGKGTRKDGRTRGRSGEEVVDVEEASPARVGTRGAGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRGKDKQAGGKSGGKDIKEEAPAAATGRATRTRRRSSMVNYREMLHGKGTSSXXXXXXXXXXXXXXXXXXXXXXXXXE-----SDGDLDGKKSGDKCARDQDIDEDDSFAVTLKDDDEXXXXXXXXXXIKTVGSKGSAGCAKRSRSEXXXXXXXXKRKGRKRNHRYNEPDXXXXXXXXXXXXXXXXXXXXXXXXAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLRRLTDRCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGELEGQRPGLGEEGESXXXXXXXFHVGRGRRWRTVGSSGGRYG 1021
            MSAGRRRRVMLESDDEDDA V EQG GEVSVTPHV PPT EQ RPSKSRRSMK+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QLAERWSKLEEDSDH+LSDGDG DASGAKRSSLVQLQFHETWGRG+RS TASRQ+   + +  P+    G                                                 SA A V AATFANGGGSSR TRKSGRRKS ANA   D  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +PVRRSSRAQKGK VAD                        XXXXXXXXXXXXEEFSMQPA SKKRGK TR DGRT GRSGEEVVDVEEASPARVGTRGAGSKXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX                 GR K          K IKEEAP              SMVNYREMLHG GT  XXXXXXXXXXXXXXXXX   XXXXX      SDG+LDGKK G+KCA D+DIDE DSFAVT++D   XXXXXXXXXX                   XXXXXXXX               XXXXXX    XXXXXXXX      AFFSHAAFFNEMEQSEDGG+SSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDL RL DRCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKK+KKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYG LDLGELEGQ P        XXXXXXX  VGRGRRWRTVGSS GRYG
Sbjct:    1 MSAGRRRRVMLESDDEDDAAVREQGSGEVSVTPHVLPPTTEQARPSKSRRSMKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAERWSKLEEDSDHELSDGDGGDASGAKRSSLVQLQFHETWGRGARSRTASRQA---ISQGAPAVRRRGKQK----------------------------------------------SAPASVGAATFANGGGSSRNTRKSGRRKSVANASGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVRRSSRAQKGKAVADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEFSMQPASSKKRGKDTRIDGRTMGRSGEEVVDVEEASPARVGTRGAGSKXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXVPVKSVGNGKKSTKENAGREKXXXXXXXXXXKGIKEEAPXXXXXXXXXXXXXXSMVNYREMLHGNGTXXXXXXXXXXXXXXXXXXXGWDXXXXXXXXXXXSDGELDGKKPGNKCATDEDIDEXDSFAVTIQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXNFIDXXXXXXXXGEDGGDAFFSHAAFFNEMEQSEDGGVSSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLNDRCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKEKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGGLDLGELEGQGPXXXXXXXXXXXXXXXXDVGRGRRWRTVGSSSGRYG 977          
BLAST of mRNA_Ecto-sp6_S_contig10.636.1 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI)

HSP 1 Score: 723 bits (1866), Expect = 5.300e-246
Identity = 700/813 (86.10%), Postives = 706/813 (86.84%), Query Frame = 0
Query:   10 MLESDDEDDAGVGEQGLGEVSVTPHVTPPTAEQTRPSKSRRSMKVIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLAERWSKLEEDSDHDLSDGDGDDASGAKRSSLVQLQFHETWGRGSRSSTASRQSRRLVKEPPPSGDEVGDSSDSDDGLGGFIVDSEDEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAAPVVAATFANGGGSSRITRKSGRRKSGANACEIDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDKPVRRSSRAQKGKEVADEEPGSGKRRKTSAVGSEPESAGPSXXXXXXXXXXXXEEFSMQPAGSKKRGKGTRKDGRTRGRSGEEVVDVEEASPARVGTRGAGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRGKDKQAGGKSGGKDIKEEAPAAATGRATRTRRRSSMVNYREMLHGKGTSSXXXXXXXXXXXXXXXXXXXXXXXXXESDGDLDGKKSGDKCARDQDIDEDDSFAVTLKDDDEXXXXXXXXXXIKTVGSKGSAGCAKRSRSEXXXXXXXXKRKGRKRNHRYNEPDXXXXXXXXXXXXXXXXXXXXXXXXAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLRRLTDRCSACNRSNRTSVIAFLSGSEYDPNRV 822
            MLESDDEDDAGVGEQGLGEVSVTPHVTPPTAEQTRPSKSRRSMKVIA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QLAERWSKLEEDSDHDLSDGDGDDASGAKRSSLVQLQFHETWGRGSRS TASR   RLVKEPPPSGDEVGDS                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    TRKSGRRKSGANA EIDD XXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DKPVRRSSR QKGK VAD++PGSGKRRKTSAVGSEPESAGPSXXXXXXXXXXXXEEFSMQPAGSKKRGKGTRKDG TRGRSGEEVVDVEEASPARVGTRGAGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VGRGKDK+ GGKSGGK IKEEAPAAATGRATRTRRRSSMVNYREMLHGKGTSSXXXXXXXXXXXXXXXX         ESDG+LDGKKSGDKCARD+DIDEDDSFAVTLKDD+EXXXXXXXXXX                   XXXXXXXX    R  NHRYNEPD         XXXXXXXXXXXXX  AFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDL RLTDRCSACNRSNRTSVIAFLSGSEYDPNRV
Sbjct:    1 MLESDDEDDAGVGEQGLGEVSVTPHVTPPTAEQTRPSKSRRSMKVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAERWSKLEEDSDHDLSDGDGDDASGAKRSSLVQLQFHETWGRGSRSRTASR---RLVKEPPPSGDEVGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTRKSGRRKSGANASEIDDXXXXXXXXSRADGHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKPVRRSSRLQKGKGVADKDPGSGKRRKTSAVGSEPESAGPSXXXXXXXXXXXXEEFSMQPAGSKKRGKGTRKDGGTRGRSGEEVVDVEEASPARVGTRGAGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-VGRGKDKKVGGKSGGKGIKEEAPAAATGRATRTRRRSSMVNYREMLHGKGTSSXXXXXXXXXXXXXXXXSGWDNDDEDESDGELDGKKSGDKCARDEDIDEDDSFAVTLKDDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--NHRYNEPDDGDEDNFIDXXXXXXXXXXXXXD-AFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPNRV 806          
BLAST of mRNA_Ecto-sp6_S_contig10.636.1 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 5.080e-121
Identity = 192/201 (95.52%), Postives = 194/201 (96.52%), Query Frame = 0
Query:  821 RVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGELEGQRPGLGEEGESXXXXXXXFHVGRGRRWRTVGSSGGRYG 1021
            +VWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGP TSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLG+LEGQR GLG     XXXXXXXFHVGRGRRWRTVGSSGGRYG
Sbjct:   58 KVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPHTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGDLEGQRAGLGXX-XXXXXXXXXFHVGRGRRWRTVGSSGGRYG 257          
BLAST of mRNA_Ecto-sp6_S_contig10.636.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 4.950e-14
Identity = 64/208 (30.77%), Postives = 97/208 (46.63%), Query Frame = 0
Query:  712 YVEYIAKATQGDGAGEAFMKKYVAQPRIPEHA--RYGKAKEMVEKKLRISGESLC--GSWRQDFRDTIMRYPHYGYHH------------------VDGDLRRLTDRCSACNRSNRTSVIA-FLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFR 896
            Y+E++AKA QG G G AFM+K+ ++     HA   Y KA +  E ++    ES+   GSW Q+F   +  YP  G+H                   +D +     D C+AC+R  R ++   +L+GS                             +KQ+ +    LG  C++KSHL+H+L HYKLYLV KV   +   +G+ PE+ R
Sbjct:  940 YLEFLAKAVQGGGKGAAFMEKFDSK----RHAFTDYRKAIKNFEGRVCTIRESIAAGGSWNQEFMTAVTSYPFVGFHFGVSHEGPTEIDDEEEGQDIDWESLGRPDPCAACHRRQRENMSTMYLAGSR------------------------GGYKSKQKVRERLGLGGRCRYKSHLYHTLLHYKLYLVCKVREHM-DTTGVGPEDLR 1118          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KKK5_9PHAE8.570e-31175.61DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G8T9_ECTSI5.300e-24686.10DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G8T8_ECTSI5.080e-12195.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLB0_ECTSI4.950e-1430.77RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025451Domain of unknown function DUF4211PFAMPF13926DUF4211coord: 657..820
e-value: 1.8E-10
score: 41.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:2223693..2234487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.636.1mRNA_Ecto-sp6_S_contig10.636.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 2223473..2234487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.636.1 ID=prot_Ecto-sp6_S_contig10.636.1|Name=mRNA_Ecto-sp6_S_contig10.636.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1022bp
MSAGRRRRVMLESDDEDDAGVGEQGLGEVSVTPHVTPPTAEQTRPSKSRR
SMKVIAADEDDDEDGDNDGSGGGGLFGGSYAGGESAGGGDEQEDDEAERN
RRRQLAERWSKLEEDSDHDLSDGDGDDASGAKRSSLVQLQFHETWGRGSR
SSTASRQSRRLVKEPPPSGDEVGDSSDSDDGLGGFIVDSEDEQDVDVDGG
GGGGGGGGSGSGSTKKRKGKQKSAAAPVVAATFANGGGSSRITRKSGRRK
SGANACEIDDDEDHAEAASRADGHAAASASKKRRNRGKSQPEEDEEGDGR
LARRKRARRSKASARVEAAAAADGDGEEEENDKPVRRSSRAQKGKEVADE
EPGSGKRRKTSAVGSEPESAGPSSSDDDDDDDDSDEEFSMQPAGSKKRGK
GTRKDGRTRGRSGEEVVDVEEASPARVGTRGAGSKNKGKGKGKGKGKSKG
KSGGGGSPIVLSSQEEEEEVPVKAVGKGKKKAKEKVGRGKDKQAGGKSGG
KDIKEEAPAAATGRATRTRRRSSMVNYREMLHGKGTSSSEEDDGNGGGGG
GEDDSGWDNDDDDESDGDLDGKKSGDKCARDQDIDEDDSFAVTLKDDDEE
EEEEEEEEEIKTVGSKGSAGCAKRSRSEKNEGGSGSKRKGRKRNHRYNEP
DDDDEDNFIDDDDDDDDDDEEDGGDAFFSHAAFFNEMEQSEDGGISSLSV
GTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKE
MVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLRRLTDRCSAC
NRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAK
ATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGG
PQTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKT
FLEMGAASSILDWLSGEAQQGQYGDLDLGELEGQRPGLGEEGESEDEDEE
EFHVGRGRRWRTVGSSGGRYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025451DUF4211