prot_Ecto-sp6_S_contig10.626.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.626.1
Unique Nameprot_Ecto-sp6_S_contig10.626.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length108
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: D7FPB1_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPB1_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.480e-67
Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
Query:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVAFPGGKKAKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPFTFTQ 107
            MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADV FPGGKK KANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKK+RLCIGKLPAGAGPFTFTQ
Sbjct:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFTFTQ 107          
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: A0A835ZB30_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB30_9STRA)

HSP 1 Score: 109 bits (272), Expect = 7.470e-29
Identity = 54/80 (67.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:   28 SVSRPTNSLSMADVAFPGGKKAKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPFTFTQ 107
            SV R  +SL MA   FPGGKKA+   G  LK V  KA Y A YGCEEGKCG+CEHKV GKKVRLCIGK+P G GP TFTQ
Sbjct:   28 SVVRAPSSLYMAQCIFPGGKKAEGKPGEALKAVVAKAKYDAPYGCEEGKCGSCEHKVGGKKVRLCIGKVPPGNGPHTFTQ 107          
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: A0A7R9UCS5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCS5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.480e-19
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 0
Query:   18 AFMAPS-VTVRSVSRPTNSLSM-ADVAFPGGKKAKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPF 103
            AF+ P  +  R+ ++    +SM  +V FPGGKK  A  G P K VA +AG+K  YGC++G CG CE KVNGKKVR C+ K+PA   P 
Sbjct:   42 AFLPPKGLATRAPAQQRGQMSMNIEVVFPGGKKTTAKAGEPFKNVAARAGFKPTYGCKQGSCGACEIKVNGKKVRPCVAKVPASNKPL 129          
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: A0A4D9CYU4_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYU4_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.380e-17
Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSR--PTNSLSMADVAFPGGKKAKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHK-VNGKKVRLCIGKLPAGAGPFTF 105
            M  R+V  ++ ++A   AF AP      + R  P  +  + +V +PG KK KA  G  LK VA +A Y   YGCEEGKCG+CEHK  +GKK R+CI K+P  AGP T 
Sbjct:    1 MMLRIVQALILLMA-TTAFFAPHAPSAGIKRGGPVYNGDV-EVIWPGNKKVKAKPGEALKAVAARARYTPNYGCEEGKCGSCEHKGSDGKKYRVCITKVPKIAGPLTL 106          
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: A0A2D5MUZ7_9BACT (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MUZ7_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 3.310e-7
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
Query:   56 PLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKVRLCIGKLPA 98
            PLK + + AG    + CE GKCGTCE++V+G+  RLC   +PA
Sbjct:   45 PLKKIVKAAGAPVKFNCENGKCGTCENRVDGRLTRLCTATVPA 87          
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: B8C2R5_THAPS (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2R5_THAPS)

HSP 1 Score: 52.0 bits (123), Expect = 4.390e-6
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   57 LKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKVRLCIGKLPAG 99
            +  V   A  K  Y C+ G+CGTC  K+NG+K+R C+ K+P+G
Sbjct:   89 ISQVCNAARVKVPYNCQNGECGTCTVKMNGRKIRACVSKVPSG 131          
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: A0A7S1VCI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VCI6_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 1.700e-5
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0
Query:   46 GKKAKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKVRLCIGKLPAG 99
            GK AKA  G  +K VA  A  K +Y C++G CGTC  K+NG+KV+ C   +  G
Sbjct:   79 GKPAKAVVGQSVKVVANAARVKISYDCQQGDCGTCMIKMNGRKVKACQMSIGTG 132          
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: R1D5J6_EMIHU (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D5J6_EMIHU)

HSP 1 Score: 48.5 bits (114), Expect = 4.540e-5
Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 0
Query:   54 GAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKVRLCIGKLP 97
            G  L+ VA+ AG    Y C EG C TC+ K+ G  V++C+GK+P
Sbjct:   48 GQKLRDVARAAGIPIKYSCNEGTCKTCQVKMGGGMVKVCVGKVP 91          
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: A0A6U3ZFR1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZFR1_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 4.760e-5
Identity = 19/48 (39.58%), Postives = 27/48 (56.25%), Query Frame = 0
Query:   57 LKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPFT 104
            +  V   A  K  Y C+ G CGTC  K+NG++ + C+ K+PAG    T
Sbjct:   90 ISQVCASARVKVPYNCQNGDCGTCMVKINGRQAKACVSKVPAGKCAIT 137          
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Match: A0A7S4IHS5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IHS5_9EUKA)

HSP 1 Score: 49.3 bits (116), Expect = 6.510e-5
Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   40 DVAFP--GGKKAKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKK-VRLCIG-KLPAGA 100
            +V FP  G K  KA  G P+  V ++AG +  + C+ G+CGTC+ ++NG+  +++C G  +P GA
Sbjct:   85 EVTFPQKGNKVVKAKQGEPIGAVCKRAGVRVKFDCKNGRCGTCQVRLNGRSALKVCQGGTVPGGA 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FPB1_ECTSI1.480e-6797.202Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A835ZB30_9STRA7.470e-2967.502Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7R9UCS5_9STRA7.480e-1948.86Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CYU4_9STRA7.380e-1745.372Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A2D5MUZ7_9BACT3.310e-748.842Fe-2S ferredoxin-type domain-containing protein n... [more]
B8C2R5_THAPS4.390e-644.192Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S1VCI6_9STRA1.700e-546.30Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
R1D5J6_EMIHU4.540e-545.452Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A6U3ZFR1_9STRA4.760e-539.58Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4IHS5_9EUKA6.510e-538.46Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 23..97
e-value: 4.0E-7
score: 31.6
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 50..90
e-value: 3.8E-6
score: 26.8
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 72..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..107
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.786
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 37..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:2108989..2112685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.626.1mRNA_Ecto-sp6_S_contig10.626.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 2108910..2114465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.626.1 ID=prot_Ecto-sp6_S_contig10.626.1|Name=mRNA_Ecto-sp6_S_contig10.626.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=108bp
MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVAFPGGKKAK
ANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGA
GPFTFTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR0060582Fe2S_fd_BS
IPR0360102Fe-2S_ferredoxin-like_sf