prot_Ecto-sp6_S_contig10.623.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.623.1
Unique Nameprot_Ecto-sp6_S_contig10.623.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length304
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.623.1 vs. uniprot
Match: D7FPB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB4_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 2.360e-93
Identity = 155/204 (75.98%), Postives = 171/204 (83.82%), Query Frame = 0
Query:    1 MLFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSHKHNIFLVIGFLNAGTISTLGILTLFMAFWPPLLADFVVVSGASISFIVIIFVAVRITSFINHALSESSHLHQHAASSNEFYGEAKKNLWKQALALCSTGCAVILAIAVRHLTQFGRTTPIVSWTAEMLCGHAAAVLFMSLTQFHAAAPAMSSTATNHWNLITTMRSRSE 204
            MLFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVS KHNIFLV+G LNAG ISTLG+ TLFM FWPPLL D  V SG++I+ IVIIFVAVRITSFIN A+SE      HAASSNEFY EAKKNLWKQALALCS GCAV +AIAVRHLTQFGR+TPI+ WTA+ LCGHAAA++F SLTQF AA P+MS  ++   +LI TM S SE
Sbjct:    1 MLFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSRKHNIFLVVGLLNAGIISTLGVGTLFMTFWPPLLVDLAVASGSAITCIVIIFVAVRITSFINCAMSE------HAASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLTQFGRSTPIIVWTAQTLCGHAAALIFTSLTQFQAA-PSMSRASSTRPSLIATMTSSSE 197          
BLAST of mRNA_Ecto-sp6_S_contig10.623.1 vs. uniprot
Match: A0A6H5JMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK0_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 2.590e-78
Identity = 148/242 (61.16%), Postives = 160/242 (66.12%), Query Frame = 0
Query:   61 MAFWPPLLADFVVVSGASISFIVIIFVAVRITSFINHALSESSHLHQHAASSNEFYGEAKKNLWKQALALCSTGCAVILAIAVRHLTQFGRTTPIVSWTAEMLCGHAAAVLFMSLTQFHAAAPAMSSTATNHWNLITTMRSRSESLISSGAPEAVAGVVMLFLNWLRSCMLHPGSTKKSHPQSPPRQQYKEKQQEAINSLSSDLEDYEIVTCMVKSESVAEKIINHKVSSIGTNKSRVLPTL 302
            MAFWPPLLAD VVVSG+ I+  VI FVAVRITSFIN A+SE+                                                            LCGHAAA LFMS TQFHAAAP+MSST TNH  LITTMRSRS+ L+SSG P AVAGVV+ FLN LRSCM HPG TKKSHPQS PRQQ+KE+QQEAINSLSSDLEDYE+VTC  KSE VAEKIINHKVSS+GTNKSRVLPTL
Sbjct:    1 MAFWPPLLADLVVVSGSCIAGTVIFFVAVRITSFINRAMSEA------------------------------------------------------------LCGHAAAFLFMSSTQFHAAAPSMSSTGTNHSTLITTMRSRSKHLMSSGVPGAVAGVVIPFLNRLRSCMFHPGRTKKSHPQSRPRQQHKEEQQEAINSLSSDLEDYEVVTCTAKSERVAEKIINHKVSSVGTNKSRVLPTL 182          
BLAST of mRNA_Ecto-sp6_S_contig10.623.1 vs. uniprot
Match: D7FVJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ6_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 3.710e-38
Identity = 80/177 (45.20%), Postives = 112/177 (63.28%), Query Frame = 0
Query:    2 LFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSHKHNIFLVIGFLNAGTISTLGILTLFMAFWPPLLADFVVVSGASISFIVIIFVAVRITSFINHALSESSHLHQHAASSNEFYGEAKKNLWKQALALCSTGCAVILAIAVRHLTQFGRTTPIVSWTAEMLCGHAAAVLFMSLTQF 178
            +F VAM+AE+W+ESLP Q+++P SFA  L   S   ++F+VIG  N G +S LG++T F   WP   AD  +V G   + +V+ FVA RIT+ IN A S +      + SS  FY +AK+N+W QA ALC  GC  +L IA++ LT  GR+TPI+  T ++L GH  A++F S T F
Sbjct:   48 MFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARSWPQQAADLFIVGGVLTAELVVFFVASRITAVINQATSTAMG-RPGSPSSRAFYFKAKRNMWIQAAALCGVGCFPMLVIAIKRLTMAGRSTPIIIETLQILTGHGGAIMFSSATSF 223          
BLAST of mRNA_Ecto-sp6_S_contig10.623.1 vs. uniprot
Match: A0A6H5KVX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX1_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.080e-24
Identity = 63/161 (39.13%), Postives = 86/161 (53.42%), Query Frame = 0
Query:    2 LFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSHKHNIFLVIGFLNAGTISTLGILTLFMAFWPPLLADFVVVSGASISFIVIIFVAVRITSFINHALSESSHLHQHAASSNEFYGEAKKNLWKQALALCSTGCAVILAIAVRHLTQFGRTTPIVSWTAEM 162
            +F VAM+AE+W+ESLP Q+++P SFA  L   S   ++F+VIG  N G +S LG++T F   WP   AD  VV G                            L   + SS  FY +AK+NLW QA AL   GC  +L IA++ LT  GR+TPI+  T ++
Sbjct:   32 MFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARTWPQQAADIFVVGGI---------------------------LTAGSPSSRTFYSKAKRNLWIQAAALSGVGCFPMLVIAIKLLTMAGRSTPIILETLQV 165          
BLAST of mRNA_Ecto-sp6_S_contig10.623.1 vs. uniprot
Match: A0A6H5KV07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV07_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.000e-5
Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 0
Query:    3 FGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSHKHNIFLVIGFLNAGTISTLGILTLFMAFWPPLLAD 70
            F +  +A FW+  LP QL+   S+A  L   S + NI LV+G LNA T+S  GILT+   +   + AD
Sbjct:   27 FAMMQVASFWVSGLPSQLLPAESYAARLKNASEQRNIILVLGTLNASTVSGSGILTILFPYSAKVAAD 94          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FPB4_ECTSI2.360e-9375.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMK0_9PHAE2.590e-7861.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVJ6_ECTSI3.710e-3845.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVX1_9PHAE2.080e-2439.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV07_9PHAE2.000e-541.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 250..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 227..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..226
NoneNo IPR availableTMHMMTMhelixcoord: 67..89
NoneNo IPR availableTMHMMTMhelixcoord: 128..147
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:2068823..2072703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.623.1mRNA_Ecto-sp6_S_contig10.623.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 2068611..2072871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.623.1 ID=prot_Ecto-sp6_S_contig10.623.1|Name=mRNA_Ecto-sp6_S_contig10.623.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=304bp
MLFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSHKHNIFLVIGFLNAGT
ISTLGILTLFMAFWPPLLADFVVVSGASISFIVIIFVAVRITSFINHALS
ESSHLHQHAASSNEFYGEAKKNLWKQALALCSTGCAVILAIAVRHLTQFG
RTTPIVSWTAEMLCGHAAAVLFMSLTQFHAAAPAMSSTATNHWNLITTMR
SRSESLISSGAPEAVAGVVMLFLNWLRSCMLHPGSTKKSHPQSPPRQQYK
EKQQEAINSLSSDLEDYEIVTCMVKSESVAEKIINHKVSSIGTNKSRVLP
TLG*
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