prot_Ecto-sp6_S_contig10.552.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.552.1
Unique Nameprot_Ecto-sp6_S_contig10.552.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length203
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: D7FN78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN78_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 1.010e-93
Identity = 188/202 (93.07%), Postives = 189/202 (93.56%), Query Frame = 0
Query:    1 MGLVGLTVHPAAETVAAVDKDGGCRSPETISRTALQGGAPKKXXXXXXXXXXXXXXXXXXXXXXXSPWSISKKLLEERARKAEYKAGRELVSKMSRKDSARRVQPKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAIARSAATSAATTTTGAASTATIAPTSFLRNV 202
            MGLVGLTVHPAA TVAAVDKDGGC+SPETISRTALQG A KK  XXXXXXXXXXXXXXXXXXXXXSPWSISKKLLEERARKAEYKAGRELVSKMSRKDSAR   PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAIARSAATSAA    GAA TATIAPTSFLRNV
Sbjct:  260 MGLVGLTVHPAAGTVAAVDKDGGCQSPETISRTALQGEASKKSAXXXXXXXXXXXXXXXXXXXXXSPWSISKKLLEERARKAEYKAGRELVSKMSRKDSAR---PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAIARSAATSAAXXXXGAAPTATIAPTSFLRNV 458          
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: V5FZU4_BYSSN (Nucleosome binding protein n=2 Tax=Byssochlamys spectabilis TaxID=264951 RepID=V5FZU4_BYSSN)

HSP 1 Score: 60.1 bits (144), Expect = 1.700e-8
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  105 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 168
            PK   S+Y+ F  E+  S +   PG+S   +   +GE W+ LSDE + PY +KA+AD+KRYED+
Sbjct:   26 PKRGLSAYMFFANEQRESVREQNPGISFGQVGKVLGERWKALSDEERRPYEEKAQADKKRYEDE 89          
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: A0A8H7VAX4_9FUNG (HMG box domain-containing protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7VAX4_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 2.930e-8
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 0
Query:   91 VSKMSRKDSARRVQPKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAI 172
              K ++KD +    PK   S+Y+ F  ++ A+ K   P  +   I   +GE W+ +SD+ K PY KKAEAD+KRYED+  A+
Sbjct:   19 TKKRTKKDPS---APKRGLSAYMFFSQDQRATVKEESPDATFGQIGKLLGEKWKNMSDDEKKPYVKKAEADKKRYEDEKAAL 97          
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: A0A168Q5V9_MUCCL (HMG box domain-containing protein n=5 Tax=Mucor TaxID=4830 RepID=A0A168Q5V9_MUCCL)

HSP 1 Score: 58.9 bits (141), Expect = 3.540e-8
Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   91 VSKMSRKDSARRVQ-----PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAI 172
            V K++++++ +R +     PK   S+Y+ F  +K A  K   P  S   +   +GE W+ +SDE K PY  KAEAD+KRYED+  A+
Sbjct:    5 VQKVTKRETKKRGKKDPNAPKRGLSAYMFFSQDKRAQVKEENPEASFGTLGKLLGEKWKAMSDEEKKPYIDKAEADKKRYEDEKAAL 91          
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: A0A0F4YSN3_TALEM (Nonhistone chromosomal protein 6B n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4YSN3_TALEM)

HSP 1 Score: 58.5 bits (140), Expect = 7.060e-8
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  105 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 168
            PK   S+Y+ F  E+  + +   PG+S   +   +GE W+ LSDE + PY +KA+AD+KRYED+
Sbjct:   25 PKRGLSAYMFFANEQREAVREQNPGISFGQVGKILGERWKALSDEERRPYEEKAQADKKRYEDE 88          
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: K8EPY9_9CHLO (Nucleosome binding protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EPY9_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 7.240e-8
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0
Query:  105 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYE 166
            PK   S+Y  F  ++ A    A P M +T++   +GE WR +SD  K+PY KKA+AD+ RYE
Sbjct:   24 PKRNLSAYFFFMNDQRAKVVKANPDMKVTEVGKKLGELWRAMSDSEKVPYNKKADADKVRYE 85          
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: A0A8H7BXE0_9FUNG (Non-histone chromosomal protein 6 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BXE0_9FUNG)

HSP 1 Score: 57.8 bits (138), Expect = 1.440e-7
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 0
Query:  105 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAI 172
            PK   S+Y+ F  EK    K   P  +   I   +GE W+ ++DE K PY +KAEAD+KRYED+  A+
Sbjct:   30 PKRGLSAYMFFSQEKRQEVKDENPEATFGQIGKILGEKWKGMTDEQKKPYVEKAEADKKRYEDEKAAV 97          
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: A0A168PS98_MUCCL (HMG box domain-containing protein n=4 Tax=Mucor TaxID=4830 RepID=A0A168PS98_MUCCL)

HSP 1 Score: 57.4 bits (137), Expect = 1.590e-7
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0
Query:  105 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 168
            PK   S+Y+ F  ++  + K   P  +   I   +GE W+ +SDE K PY KKAEAD+KRYED+
Sbjct:   31 PKRGLSAYMFFSQDQRTTVKDENPEATFGQIGKLLGEKWKNMSDEEKKPYVKKAEADKKRYEDE 94          
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: NHP6_CANAL (Non-histone chromosomal protein 6 n=6 Tax=Candida/Lodderomyces clade TaxID=1535325 RepID=NHP6_CANAL)

HSP 1 Score: 57.0 bits (136), Expect = 1.870e-7
Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0
Query:   96 RKDSARRVQPKGPQ---SSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 168
            +K S ++  P  P+   S+Y+ F  E     +A  PG+S   +   +GE W+ L+ E KLPY  KAEAD+KRYE +
Sbjct:    7 KKSSRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADKKRYEKE 82          
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Match: G8BIJ5_CANPC (HMG box domain-containing protein n=2 Tax=Candida TaxID=1535326 RepID=G8BIJ5_CANPC)

HSP 1 Score: 57.0 bits (136), Expect = 1.920e-7
Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = 0
Query:   96 RKDSARRVQPKGPQ---SSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 168
            RK S ++  P  P+   S+Y+ F  E     +A  PG+S   +  A+G+ W+ LS E K+PY  KAEAD+KRYE +
Sbjct:    8 RKVSRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKALGDKWKALSAEDKVPYENKAEADKKRYEKE 83          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN78_ECTSI1.010e-9393.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
V5FZU4_BYSSN1.700e-843.75Nucleosome binding protein n=2 Tax=Byssochlamys sp... [more]
A0A8H7VAX4_9FUNG2.930e-839.02HMG box domain-containing protein n=1 Tax=Mucor pl... [more]
A0A168Q5V9_MUCCL3.540e-837.93HMG box domain-containing protein n=5 Tax=Mucor Ta... [more]
A0A0F4YSN3_TALEM7.060e-842.19Nonhistone chromosomal protein 6B n=1 Tax=Rasamson... [more]
K8EPY9_9CHLO7.240e-843.55Nucleosome binding protein n=1 Tax=Bathycoccus pra... [more]
A0A8H7BXE0_9FUNG1.440e-742.65Non-histone chromosomal protein 6 n=1 Tax=Apophyso... [more]
A0A168PS98_MUCCL1.590e-743.75HMG box domain-containing protein n=4 Tax=Mucor Ta... [more]
NHP6_CANAL1.870e-739.47Non-histone chromosomal protein 6 n=6 Tax=Candida/... [more]
G8BIJ5_CANPC1.920e-740.79HMG box domain-containing protein n=2 Tax=Candida ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..175
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 138..157
score: 37.78
coord: 157..177
score: 23.46
coord: 120..138
score: 36.45
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 46..173
NoneNo IPR availablePANTHERPTHR13711:SF302HIGH MOBILITY GROUP PROTEIN DSP1-RELATEDcoord: 46..173
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 104..174
e-value: 4.5E-18
score: 76.1
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 105..170
e-value: 1.6E-18
score: 66.9
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 105..173
score: 16.434
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 91..189
e-value: 4.8E-21
score: 76.8
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 104..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1372324..1374371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.552.1mRNA_Ecto-sp6_S_contig10.552.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 1372324..1374371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.552.1 ID=prot_Ecto-sp6_S_contig10.552.1|Name=mRNA_Ecto-sp6_S_contig10.552.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=203bp
MGLVGLTVHPAAETVAAVDKDGGCRSPETISRTALQGGAPKKSSAGEKRK
TSSLSSSSTSAAAAASPWSISKKLLEERARKAEYKAGRELVSKMSRKDSA
RRVQPKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEM
KLPYTKKAEADRKRYEDQLRAIARSAATSAATTTTGAASTATIAPTSFLR
NV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf