prot_Ecto-sp6_S_contig10.549.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.549.1
Unique Nameprot_Ecto-sp6_S_contig10.549.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length294
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: D7FN76_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN76_ECTSI)

HSP 1 Score: 462 bits (1188), Expect = 1.140e-162
Identity = 254/293 (86.69%), Postives = 258/293 (88.05%), Query Frame = 0
Query:    1 MDKRVRVAAVLAGLVGVAMAQSGVGSSSGDMNENAASAGEGDPPQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 293
            MDKRVRVAAVLAGLVGV MAQSGVGSSSGDMNENA SAGEG+PPQVGFWTAFANSV MIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILP+TYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGA                           R    AV+TMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGV+GHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVF LHALVFGE
Sbjct:    1 MDKRVRVAAVLAGLVGVTMAQSGVGSSSGDMNENAVSAGEGEPPQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPRTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIGGAGGGGV------------------RSRRGAVMTMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE 275          
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A6H5KTH0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTH0_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 3.700e-145
Identity = 242/275 (88.00%), Postives = 253/275 (92.00%), Query Frame = 0
Query:    1 MDKRVRVAAVLAGLVGVAMAQSGVGSSSGDMNENAASAGEGDPPQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQA--------RLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 267
            MDKRVRVAAVLAGLVGVAMAQSGVGS+SGDMNENAASAGEG P QVGFWTAFANSV MIIATEIGDKTFFIAAIMAMSHPRLAVFGGA+GALAVMTVLSAALGYALPA+L +TYTHYASALLFLYFG RMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFD+EGGGA   XXXXXXXXXXX RASTAAK  ++         RL ++ V+TMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGV+GHSLCTGMAVIGGKLLAAR
Sbjct:    1 MDKRVRVAAVLAGLVGVAMAQSGVGSTSGDMNENAASAGEGKPRQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGYALPAVLSRTYTHYASALLFLYFGCRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDLEGGGAIGGXXXXXXXXXXXRRASTAAKCCLRCAALADAPLRLGDSVVLTMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVIGHSLCTGMAVIGGKLLAAR 275          
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A836CAP1_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP1_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.130e-81
Identity = 163/247 (65.99%), Postives = 184/247 (74.49%), Query Frame = 0
Query:   47 GFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESH-GGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFG 292
            GFW  F + V MIIATEIGDKTFFIAAIMAM + R+ VF GA+ ALA+MTVLSAALG+ALP ILP+ YTHYA ALLFLYFG +MLKEG E+  GGPSEEL EVE+EL  KR  +    G        G  XXXXXXXXXXXXXXX    A K           V +   ++TFLAEWGDRSQIATIALA  KD  GVT GG++GHSLCTGMAV+GG+LLAARISE+TVHLVGG LFLVF LH+L+FG
Sbjct:   91 GFWGGFVSGVGMIIATEIGDKTFFIAAIMAMQYSRMLVFAGAITALAIMTVLSAALGFALPNILPREYTHYAGALLFLYFGVKMLKEGFEADDGGPSEELAEVEQELMLKRNAD---EGDVEQTPHSGNGXXXXXXXXXXXXXXXXXXXADKK------DAWGVFSQGLTLTFLAEWGDRSQIATIALAAAKDVVGVTVGGILGHSLCTGMAVVGGRLLAARISERTVHLVGGGLFLVFGLHSLIFG 328          
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7S2HJF0_9STRA (GDT1 family protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJF0_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.980e-81
Identity = 144/254 (56.69%), Postives = 176/254 (69.29%), Query Frame = 0
Query:   41 GDPPQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGG-PSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 293
            GD     FW AF NS +MII TEIGDKTFFIAA++AM H R A+F GAV ALA+MTVLSAA+G+ALP +LP+ YTHYASALLFLYFG R+LK+  E  GG PS+EL EVEEEL  K++            +E G                      +KS          +IT +F++TFLAEWGDRSQIATIALA  KDPFGVT GG++GHSLCTG+AV+GG+LLAARISEKTV +VGG LFL+FA+H+ ++ +
Sbjct:  109 GDLDSKSFWAAFINSWLMIIVTEIGDKTFFIAAVLAMRHSRGAIFTGAVAALALMTVLSAAMGFALPNLLPRKYTHYASALLFLYFGIRLLKDASEMRGGGPSDELQEVEEELISKKDCNE-------TSLENG--------------------QESKSGRMKNGDTTRIITQAFTLTFLAEWGDRSQIATIALAAAKDPFGVTLGGIIGHSLCTGIAVVGGRLLAARISEKTVAMVGGTLFLIFAVHSFIYPD 335          
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: F0Y333_AURAN (GDT1 family protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y333_AURAN)

HSP 1 Score: 244 bits (624), Expect = 9.830e-78
Identity = 145/247 (58.70%), Postives = 171/247 (69.23%), Query Frame = 0
Query:   48 FWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHG-GPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 293
            F  AF NS+ MI ATEIGDKTFFIAAI+AM H RL +F GAV ALAVMTVLSAA+GYALPA++P+TYTHYASALLF YFG RMLK+     G G SEEL EVEEEL          +G    D+E  GA                 + A K L QA           F +TFLAEWGDRSQIATIALA+ KDP+GVTAGG+VGHS+CTG+AV+GG++LA+RISEK VH+VGG +FLVFA ++  F +
Sbjct:    1 FAAAFVNSMGMIWATEIGDKTFFIAAILAMKHARLVIFLGAVSALAVMTVLSAAMGYALPALMPRTYTHYASALLFFYFGCRMLKDASSMSGSGVSEELGEVEEELGG--------AGHGKKDVEDDGAEAPPPAEE---------TDAVKVLGQA-----------FMLTFLAEWGDRSQIATIALASAKDPYGVTAGGIVGHSMCTGLAVVGGRMLASRISEKHVHVVGGLIFLVFAAYSFFFED 219          
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7R9YEB3_9STRA (GDT1 family protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEB3_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.110e-77
Identity = 139/249 (55.82%), Postives = 175/249 (70.28%), Query Frame = 0
Query:   46 VGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGP--AAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFG 292
            +GF  AF  S+ MII TE+GDKTFFIAA++AM H R+ VF GA+ ALA+MTVLS  +GY LP++LP+ YTH+ASA+LFLYFG R+L E  E   GPSEEL EVEEEL  K++      GP  +  D E                   +A+  A  L +    ++ +   SF++TFLAEWGDRSQIATIALA+ KDP GVTAGGV+GH LCTG+AV+GG++LAARISEKTV +VGG LFL+FALHA ++G
Sbjct:   99 LGFVPAFVKSLAMIIVTELGDKTFFIAAVLAMKHSRMLVFAGALSALALMTVLSTMVGYTLPSLLPRAYTHFASAILFLYFGVRLLYESRELSSGPSEELREVEEELIHKKD-----QGPDGSLRDPE-------------DDAKLKKAAVQASVLDE----QSKIFAQSFTLTFLAEWGDRSQIATIALASAKDPLGVTAGGVIGHGLCTGLAVVGGRILAARISEKTVSIVGGILFLLFALHAFIWG 325          
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7S2RJT4_9STRA (GDT1 family protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT4_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.610e-77
Identity = 138/249 (55.42%), Postives = 177/249 (71.08%), Query Frame = 0
Query:   47 GFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHG-GPSEELTEVEEELA-KKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 293
            GFW AF NS +MII TE+GDKTFFIAA++AM   R AV+ GAVGALA MTVLSA +G+ LP +LP+ YTHYASA LF+YFGF++LKE  E  G GPS+EL EVE+EL  KK EG+  ++G A                         AS  +++     ++    +T SF++TFLAEWGDRSQIATIA+A  KDPFGVT GG++GH++CTG+AVIGG++LA+RISEKTV +VGG LFL FA+H+++  E
Sbjct:  112 GFWAAFLNSFLMIIVTELGDKTFFIAAVLAMRQDRWAVYLGAVGALAAMTVLSAIMGFMLPNLLPRQYTHYASAALFVYFGFKLLKEASEMEGDGPSDELQEVEDELIHKKEEGDVLENGDAVAPG---------------------ASPPSRAFANQAVTR--TLTQSFTLTFLAEWGDRSQIATIAMAAAKDPFGVTIGGIIGHAICTGIAVIGGRMLASRISEKTVAIVGGVLFLGFAVHSILVPE 337          
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7S3UU97_HETAK (GDT1 family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU97_HETAK)

HSP 1 Score: 244 bits (622), Expect = 1.370e-76
Identity = 150/254 (59.06%), Postives = 181/254 (71.26%), Query Frame = 0
Query:   42 DPPQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEG--MESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 293
            D   + F  AF  SV+MI+ATE+GDKTFFIAAI+AM H R  +FGGA+GALA+MTVLS  +G+ALP+++P+TYTHYASALLFLYFG R+LK+G  ME  GGPSEEL EVE                           XXXXXXXXXXXXXX            + +   +   +F++TFLAEWGDRSQIATIALA  KDP+GVTAGG +GH+LCTG+AV+GG++LAARISEKTVHL GGALFL+FA H+L F E
Sbjct:   58 DAASLKFMPAFVKSVLMIVATELGDKTFFIAAILAMRHSRFLIFGGAIGALALMTVLSTLMGFALPSLIPRTYTHYASALLFLYFGVRLLKDGAGMEG-GGPSEELAEVE---------------------------XXXXXXXXXXXXXXXXXXXXSPTHVGKRTNCQIAAQAFTLTFLAEWGDRSQIATIALAAAKDPYGVTAGGCIGHALCTGLAVVGGRMLAARISEKTVHLTGGALFLLFAAHSLFFEE 283          
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7S1CD49_9STRA (GDT1 family protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD49_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.590e-76
Identity = 140/251 (55.78%), Postives = 168/251 (66.93%), Query Frame = 0
Query:   44 PQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGG-PSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 293
            P + FW +F NSVIMII TE+GDKTFFIAAI+AM + R  VFGGA+GALA+MT LSAA+G+ALPAILPKTYTHYA+  LF YFG ++LKE  E   G P+EEL E E EL  K E           D+E G                       K     + +  AV T +F++TFLAEWGDRSQIATIALAT KDP GVT GG +GHSLCTG+AV+GGK+L++RISE+TV + GG LF +FALH L  G 
Sbjct:  125 PALEFWASFGNSVIMIIVTELGDKTFFIAAILAMQYDRAPVFGGAIGALALMTALSAAIGWALPAILPKTYTHYAAVALFAYFGAKLLKEAREMKDGEPNEELEEAERELGVKDE-----------DVENG-----------------------KIRSAIKKTAWAVFTQTFTLTFLAEWGDRSQIATIALATAKDPMGVTLGGTIGHSLCTGLAVLGGKMLSSRISERTVLIAGGVLFCLFALHGLWAGS 341          
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A4D9CVK3_9STRA (GDT1 family protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK3_9STRA)

HSP 1 Score: 245 bits (626), Expect = 5.010e-76
Identity = 155/268 (57.84%), Postives = 192/268 (71.64%), Query Frame = 0
Query:   47 GFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKE--GMESHGGPSEELTEVEEELAKKREGEAK---------KSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTA----------AKSLMQARLSEAA-VITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFG 292
            GFW AF NS+ MI+ TE+GDKTFFIAA++AM + RL +FGGA+ AL +MT+LSAA+G  LP +LP+ YTHYASALLFLYFG +++ E  GME   GPS+EL EVEEEL  K+EG A          ++G      +G G   XXXXXXXXXXXX  AS A          A+   +A+ + A  V T + ++TFLAEWGDRSQIATIALA  KDP+GVTAGG++GHSLCTG+AV+GG++LAARISEKTV   GG LFLVF  H+L+ G
Sbjct:  104 GFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAISALIIMTILSAAIGNVLPNVLPRIYTHYASALLFLYFGIKLIVEARGMEG-SGPSDELQEVEEELIHKKEGRASPHTLEMTQLENGNGESHAQGSGGFEXXXXXXXXXXXXKGASPAGGAHGRMGSYAQGEGKAKGNAATKVFTQALTLTFLAEWGDRSQIATIALAAAKDPYGVTAGGILGHSLCTGLAVLGGRMLAARISEKTVASTGGVLFLVFCAHSLIVG 370          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN76_ECTSI1.140e-16286.69GDT1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KTH0_9PHAE3.700e-14588.00GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A836CAP1_9STRA2.130e-8165.99GDT1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2HJF0_9STRA3.980e-8156.69GDT1 family protein n=1 Tax=Dictyocha speculum Tax... [more]
F0Y333_AURAN9.830e-7858.70GDT1 family protein (Fragment) n=1 Tax=Aureococcus... [more]
A0A7R9YEB3_9STRA1.110e-7755.82GDT1 family protein n=2 Tax=Pinguiococcus pyrenoid... [more]
A0A7S2RJT4_9STRA1.610e-7755.42GDT1 family protein n=1 Tax=Rhizochromulina marina... [more]
A0A7S3UU97_HETAK1.370e-7659.06GDT1 family protein n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S1CD49_9STRA1.590e-7655.78GDT1 family protein n=1 Tax=Bicosoecida sp. CB-201... [more]
A0A4D9CVK3_9STRA5.010e-7657.84GDT1 family protein n=1 Tax=Nannochloropsis salina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001727Gdt1 familyPFAMPF01169UPF0016coord: 55..127
e-value: 8.2E-22
score: 77.3
coord: 212..285
e-value: 1.8E-23
score: 82.7
IPR001727Gdt1 familyPANTHERPTHR12608TRANSMEMBRANE PROTEIN HTP-1 RELATEDcoord: 49..290
IPR001727Gdt1 familyPROSITEPS01214UPF0016coord: 63..72
NoneNo IPR availablePANTHERPTHR12608:SF1TRANSMEMBRANE PROTEIN 165coord: 49..290
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 292..293
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..271
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 221..239
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..291
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..102
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.758
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 114..131
NoneNo IPR availableTMHMMTMhelixcoord: 7..25
NoneNo IPR availableTMHMMTMhelixcoord: 45..62
NoneNo IPR availableTMHMMTMhelixcoord: 272..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1338134..1346850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.549.1mRNA_Ecto-sp6_S_contig10.549.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 1337419..1346850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.549.1 ID=prot_Ecto-sp6_S_contig10.549.1|Name=mRNA_Ecto-sp6_S_contig10.549.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=294bp
MDKRVRVAAVLAGLVGVAMAQSGVGSSSGDMNENAASAGEGDPPQVGFWT
AFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSA
ALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEE
ELAKKREGEAKKSGPAAFDMEGGGAIGGAGGGGLRAAGGRRASTAAKSLM
QARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGH
SLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001727Gdt1