mRNA_Ecto-sp6_S_contig10.549.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.549.1
Unique NamemRNA_Ecto-sp6_S_contig10.549.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: D7FN76_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN76_ECTSI)

HSP 1 Score: 462 bits (1188), Expect = 7.840e-159
Identity = 254/293 (86.69%), Postives = 258/293 (88.05%), Query Frame = 1 
Query:    1 MDKRVRVAAVLAGLVGVAMAQSGVGSSSGDMNENAASAGEGDPPQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 879
            MDKRVRVAAVLAGLVGV MAQSGVGSSSGDMNENA SAGEG+PPQVGFWTAFANSV MIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILP+TYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGA                           R    AV+TMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGV+GHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVF LHALVFGE
Sbjct:    1 MDKRVRVAAVLAGLVGVTMAQSGVGSSSGDMNENAVSAGEGEPPQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPRTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIGGAGGGGV------------------RSRRGAVMTMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE 275
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A6H5KTH0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTH0_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 2.090e-141
Identity = 242/275 (88.00%), Postives = 253/275 (92.00%), Query Frame = 1 
Query:    1 MDKRVRVAAVLAGLVGVAMAQSGVGSSSGDMNENAASAGEGDPPQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQA--------RLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 801
            MDKRVRVAAVLAGLVGVAMAQSGVGS+SGDMNENAASAGEG P QVGFWTAFANSV MIIATEIGDKTFFIAAIMAMSHPRLAVFGGA+GALAVMTVLSAALGYALPA+L +TYTHYASALLFLYFG RMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFD+EGGGA   XXXXXXXXXXX RASTAAK  ++         RL ++ V+TMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGV+GHSLCTGMAVIGGKLLAAR
Sbjct:    1 MDKRVRVAAVLAGLVGVAMAQSGVGSTSGDMNENAASAGEGKPRQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGYALPAVLSRTYTHYASALLFLYFGCRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDLEGGGAIGGXXXXXXXXXXXRRASTAAKCCLRCAALADAPLRLGDSVVLTMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVIGHSLCTGMAVIGGKLLAAR 275
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A836CAP1_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP1_9STRA)

HSP 1 Score: 258 bits (658), Expect = 3.470e-78
Identity = 163/247 (65.99%), Postives = 184/247 (74.49%), Query Frame = 1 
Query:  139 GFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESH-GGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFG 876
            GFW  F + V MIIATEIGDKTFFIAAIMAM + R+ VF GA+ ALA+MTVLSAALG+ALP ILP+ YTHYA ALLFLYFG +MLKEG E+  GGPSEEL EVE+EL  KR  +    G        G  XXXXXXXXXXXXXXX    A K           V +   ++TFLAEWGDRSQIATIALA  KD  GVT GG++GHSLCTGMAV+GG+LLAARISE+TVHLVGG LFLVF LH+L+FG
Sbjct:   91 GFWGGFVSGVGMIIATEIGDKTFFIAAIMAMQYSRMLVFAGAITALAIMTVLSAALGFALPNILPREYTHYAGALLFLYFGVKMLKEGFEADDGGPSEELAEVEQELMLKRNAD---EGDVEQTPHSGNGXXXXXXXXXXXXXXXXXXXADKK------DAWGVFSQGLTLTFLAEWGDRSQIATIALAAAKDVVGVTVGGILGHSLCTGMAVVGGRLLAARISERTVHLVGGGLFLVFGLHSLIFG 328
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7S2HJF0_9STRA (GDT1 family protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJF0_9STRA)

HSP 1 Score: 257 bits (657), Expect = 6.450e-78
Identity = 144/254 (56.69%), Postives = 176/254 (69.29%), Query Frame = 1 
Query:  121 GDPPQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGG-PSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 879
            GD     FW AF NS +MII TEIGDKTFFIAA++AM H R A+F GAV ALA+MTVLSAA+G+ALP +LP+ YTHYASALLFLYFG R+LK+  E  GG PS+EL EVEEEL  K++            +E G                      +KS          +IT +F++TFLAEWGDRSQIATIALA  KDPFGVT GG++GHSLCTG+AV+GG+LLAARISEKTV +VGG LFL+FA+H+ ++ +
Sbjct:  109 GDLDSKSFWAAFINSWLMIIVTEIGDKTFFIAAVLAMRHSRGAIFTGAVAALALMTVLSAAMGFALPNLLPRKYTHYASALLFLYFGIRLLKDASEMRGGGPSDELQEVEEELISKKDCNE-------TSLENG--------------------QESKSGRMKNGDTTRIITQAFTLTFLAEWGDRSQIATIALAAAKDPFGVTLGGIIGHSLCTGIAVVGGRLLAARISEKTVAMVGGTLFLIFAVHSFIYPD 335
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: F0Y333_AURAN (GDT1 family protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y333_AURAN)

HSP 1 Score: 244 bits (624), Expect = 1.340e-74
Identity = 145/247 (58.70%), Postives = 171/247 (69.23%), Query Frame = 1 
Query:  142 FWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHG-GPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 879
            F  AF NS+ MI ATEIGDKTFFIAAI+AM H RL +F GAV ALAVMTVLSAA+GYALPA++P+TYTHYASALLF YFG RMLK+     G G SEEL EVEEEL          +G    D+E  GA                 + A K L QA           F +TFLAEWGDRSQIATIALA+ KDP+GVTAGG+VGHS+CTG+AV+GG++LA+RISEK VH+VGG +FLVFA ++  F +
Sbjct:    1 FAAAFVNSMGMIWATEIGDKTFFIAAILAMKHARLVIFLGAVSALAVMTVLSAAMGYALPALMPRTYTHYASALLFFYFGCRMLKDASSMSGSGVSEELGEVEEELGG--------AGHGKKDVEDDGAEAPPPAEE---------TDAVKVLGQA-----------FMLTFLAEWGDRSQIATIALASAKDPYGVTAGGIVGHSMCTGLAVVGGRMLASRISEKHVHVVGGLIFLVFAAYSFFFED 219
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7R9YEB3_9STRA (GDT1 family protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEB3_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.600e-74
Identity = 139/249 (55.82%), Postives = 175/249 (70.28%), Query Frame = 1 
Query:  136 VGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGP--AAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFG 876
            +GF  AF  S+ MII TE+GDKTFFIAA++AM H R+ VF GA+ ALA+MTVLS  +GY LP++LP+ YTH+ASA+LFLYFG R+L E  E   GPSEEL EVEEEL  K++      GP  +  D E                   +A+  A  L +    ++ +   SF++TFLAEWGDRSQIATIALA+ KDP GVTAGGV+GH LCTG+AV+GG++LAARISEKTV +VGG LFL+FALHA ++G
Sbjct:   99 LGFVPAFVKSLAMIIVTELGDKTFFIAAVLAMKHSRMLVFAGALSALALMTVLSTMVGYTLPSLLPRAYTHFASAILFLYFGVRLLYESRELSSGPSEELREVEEELIHKKD-----QGPDGSLRDPE-------------DDAKLKKAAVQASVLDE----QSKIFAQSFTLTFLAEWGDRSQIATIALASAKDPLGVTAGGVIGHGLCTGLAVVGGRILAARISEKTVSIVGGILFLLFALHAFIWG 325
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7S2RJT4_9STRA (GDT1 family protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT4_9STRA)

HSP 1 Score: 248 bits (633), Expect = 2.300e-74
Identity = 138/249 (55.42%), Postives = 177/249 (71.08%), Query Frame = 1 
Query:  139 GFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHG-GPSEELTEVEEELA-KKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 879
            GFW AF NS +MII TE+GDKTFFIAA++AM   R AV+ GAVGALA MTVLSA +G+ LP +LP+ YTHYASA LF+YFGF++LKE  E  G GPS+EL EVE+EL  KK EG+  ++G A                         AS  +++     ++    +T SF++TFLAEWGDRSQIATIA+A  KDPFGVT GG++GH++CTG+AVIGG++LA+RISEKTV +VGG LFL FA+H+++  E
Sbjct:  112 GFWAAFLNSFLMIIVTELGDKTFFIAAVLAMRQDRWAVYLGAVGALAAMTVLSAIMGFMLPNLLPRQYTHYASAALFVYFGFKLLKEASEMEGDGPSDELQEVEDELIHKKEEGDVLENGDAVAPG---------------------ASPPSRAFANQAVTR--TLTQSFTLTFLAEWGDRSQIATIAMAAAKDPFGVTIGGIIGHAICTGIAVIGGRMLASRISEKTVAIVGGVLFLGFAVHSILVPE 337
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7S3UU97_HETAK (GDT1 family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU97_HETAK)

HSP 1 Score: 244 bits (622), Expect = 1.860e-73
Identity = 150/254 (59.06%), Postives = 181/254 (71.26%), Query Frame = 1 
Query:  124 DPPQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEG--MESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 879
            D   + F  AF  SV+MI+ATE+GDKTFFIAAI+AM H R  +FGGA+GALA+MTVLS  +G+ALP+++P+TYTHYASALLFLYFG R+LK+G  ME  GGPSEEL EVE                           XXXXXXXXXXXXXX            + +   +   +F++TFLAEWGDRSQIATIALA  KDP+GVTAGG +GH+LCTG+AV+GG++LAARISEKTVHL GGALFL+FA H+L F E
Sbjct:   58 DAASLKFMPAFVKSVLMIVATELGDKTFFIAAILAMRHSRFLIFGGAIGALALMTVLSTLMGFALPSLIPRTYTHYASALLFLYFGVRLLKDGAGMEG-GGPSEELAEVE---------------------------XXXXXXXXXXXXXXXXXXXXSPTHVGKRTNCQIAAQAFTLTFLAEWGDRSQIATIALAAAKDPYGVTAGGCIGHALCTGLAVVGGRMLAARISEKTVHLTGGALFLLFAAHSLFFEE 283
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A7S1CD49_9STRA (GDT1 family protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD49_9STRA)

HSP 1 Score: 246 bits (627), Expect = 2.210e-73
Identity = 140/251 (55.78%), Postives = 168/251 (66.93%), Query Frame = 1 
Query:  130 PQVGFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGG-PSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTAAKSLMQARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE 879
            P + FW +F NSVIMII TE+GDKTFFIAAI+AM + R  VFGGA+GALA+MT LSAA+G+ALPAILPKTYTHYA+  LF YFG ++LKE  E   G P+EEL E E EL  K E           D+E G                       K     + +  AV T +F++TFLAEWGDRSQIATIALAT KDP GVT GG +GHSLCTG+AV+GGK+L++RISE+TV + GG LF +FALH L  G 
Sbjct:  125 PALEFWASFGNSVIMIIVTELGDKTFFIAAILAMQYDRAPVFGGAIGALALMTALSAAIGWALPAILPKTYTHYAAVALFAYFGAKLLKEAREMKDGEPNEELEEAERELGVKDE-----------DVENG-----------------------KIRSAIKKTAWAVFTQTFTLTFLAEWGDRSQIATIALATAKDPMGVTLGGTIGHSLCTGLAVLGGKMLSSRISERTVLIAGGVLFCLFALHGLWAGS 341
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Match: A0A4D9CVK3_9STRA (GDT1 family protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK3_9STRA)

HSP 1 Score: 245 bits (626), Expect = 6.930e-73
Identity = 155/268 (57.84%), Postives = 192/268 (71.64%), Query Frame = 1 
Query:  139 GFWTAFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPKTYTHYASALLFLYFGFRMLKE--GMESHGGPSEELTEVEEELAKKREGEAK---------KSGPAAFDMEGGGAXXXXXXXXXXXXXXXRASTA----------AKSLMQARLSEAA-VITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFG 876
            GFW AF NS+ MI+ TE+GDKTFFIAA++AM + RL +FGGA+ AL +MT+LSAA+G  LP +LP+ YTHYASALLFLYFG +++ E  GME   GPS+EL EVEEEL  K+EG A          ++G      +G G   XXXXXXXXXXXX  AS A          A+   +A+ + A  V T + ++TFLAEWGDRSQIATIALA  KDP+GVTAGG++GHSLCTG+AV+GG++LAARISEKTV   GG LFLVF  H+L+ G
Sbjct:  104 GFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAISALIIMTILSAAIGNVLPNVLPRIYTHYASALLFLYFGIKLIVEARGMEG-SGPSDELQEVEEELIHKKEGRASPHTLEMTQLENGNGESHAQGSGGFEXXXXXXXXXXXXKGASPAGGAHGRMGSYAQGEGKAKGNAATKVFTQALTLTFLAEWGDRSQIATIALAAAKDPYGVTAGGILGHSLCTGLAVLGGRMLAARISEKTVASTGGVLFLVFCAHSLIVG 370
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN76_ECTSI7.840e-15986.69GDT1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KTH0_9PHAE2.090e-14188.00GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A836CAP1_9STRA3.470e-7865.99GDT1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2HJF0_9STRA6.450e-7856.69GDT1 family protein n=1 Tax=Dictyocha speculum Tax... [more]
F0Y333_AURAN1.340e-7458.70GDT1 family protein (Fragment) n=1 Tax=Aureococcus... [more]
A0A7R9YEB3_9STRA1.600e-7455.82GDT1 family protein n=2 Tax=Pinguiococcus pyrenoid... [more]
A0A7S2RJT4_9STRA2.300e-7455.42GDT1 family protein n=1 Tax=Rhizochromulina marina... [more]
A0A7S3UU97_HETAK1.860e-7359.06GDT1 family protein n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S1CD49_9STRA2.210e-7355.78GDT1 family protein n=1 Tax=Bicosoecida sp. CB-201... [more]
A0A4D9CVK3_9STRA6.930e-7357.84GDT1 family protein n=1 Tax=Nannochloropsis salina... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1337419..1346850 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score461.8
Seed ortholog evalue2.3e-127
Seed eggNOG ortholog2880.D7FN76
Preferred nameTMEM165
Model size1597
Hectar predicted targeting categorysignal peptide
GOsGO:0000041,GO:0000139,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005384,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0005797,GO:0005801,GO:0005802,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006828,GO:0006873,GO:0006874,GO:0006875,GO:0006885,GO:0006996,GO:0007033,GO:0007040,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010008,GO:0012505,GO:0015075,GO:0015077,GO:0015078,GO:0015085,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015368,GO:0015369,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0016043,GO:0019538,GO:0019725,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0031090,GO:0031224,GO:0031410,GO:0031901,GO:0031902,GO:0031982,GO:0031984,GO:0031985,GO:0032468,GO:0032472,GO:0032588,GO:0034220,GO:0034645,GO:0035751,GO:0036211,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0048878,GO:0050801,GO:0051139,GO:0051179,GO:0051234,GO:0051453,GO:0055065,GO:0055067,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0061856,GO:0065007,GO:0065008,GO:0070085,GO:0070588,GO:0070838,GO:0071421,GO:0071704,GO:0071840,GO:0072503,GO:0072507,GO:0072511,GO:0080171,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098791,GO:0098805,GO:0098852,GO:0099516,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902600
Exons7
EggNOG free text desc.Golgi calcium ion transport
EggNOG OGsCOG2119@1,KOG2881@2759
Ec32 ortholog descriptionUncharacterised protein family UPF0016
Ec32 orthologEc-15_003250.1
Cds size882
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348707.1949286-UTR-Ecto-sp6_S_contig10:1337418..13381331682348707.1949286-UTR-Ecto-sp6_S_contig10:1337418..1338133Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 1337419..1338133 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348707.205633-CDS-Ecto-sp6_S_contig10:1338133..13382151682348707.205633-CDS-Ecto-sp6_S_contig10:1338133..1338215Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1338134..1338215 -
1682348707.214701-CDS-Ecto-sp6_S_contig10:1338694..13388701682348707.214701-CDS-Ecto-sp6_S_contig10:1338694..1338870Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1338695..1338870 -
1682348707.2231019-CDS-Ecto-sp6_S_contig10:1339942..13401251682348707.2231019-CDS-Ecto-sp6_S_contig10:1339942..1340125Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1339943..1340125 -
1682348707.2312715-CDS-Ecto-sp6_S_contig10:1341556..13416371682348707.2312715-CDS-Ecto-sp6_S_contig10:1341556..1341637Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1341557..1341637 -
1682348707.240642-CDS-Ecto-sp6_S_contig10:1342223..13423801682348707.240642-CDS-Ecto-sp6_S_contig10:1342223..1342380Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1342224..1342380 -
1682348707.2501273-CDS-Ecto-sp6_S_contig10:1343612..13437221682348707.2501273-CDS-Ecto-sp6_S_contig10:1343612..1343722Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1343613..1343722 -
1682348707.2669916-CDS-Ecto-sp6_S_contig10:1346757..13468501682348707.2669916-CDS-Ecto-sp6_S_contig10:1346757..1346850Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1346758..1346850 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.549.1prot_Ecto-sp6_S_contig10.549.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 1338134..1346850 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.549.1

>prot_Ecto-sp6_S_contig10.549.1 ID=prot_Ecto-sp6_S_contig10.549.1|Name=mRNA_Ecto-sp6_S_contig10.549.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=294bp
MDKRVRVAAVLAGLVGVAMAQSGVGSSSGDMNENAASAGEGDPPQVGFWT
AFANSVIMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSA
ALGYALPAILPKTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEE
ELAKKREGEAKKSGPAAFDMEGGGAIGGAGGGGLRAAGGRRASTAAKSLM
QARLSEAAVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGH
SLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFALHALVFGE*
back to top

mRNA from alignment at Ecto-sp6_S_contig10:1337419..1346850-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.549.1 ID=mRNA_Ecto-sp6_S_contig10.549.1|Name=mRNA_Ecto-sp6_S_contig10.549.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9432bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1337419..1346850- (Ectocarpus species6 EcLAC_371)
ATGGACAAGCGAGTACGCGTGGCGGCCGTGTTGGCTGGGTTGGTGGGCGT
GGCTATGGCGCAATCGGGAGTCGGCAGCAGCAGCGGAGACATGGTGAGCA
CAGGGTGGACGATGACGCGTGACGGTGGTAGCGTGTGATCGCAGTAGCTC
TTGTCTCGTTATGGGTAGCGCCGATGTTCTGTTGGCTCTTGACCGTTCCC
CTCCACCAACGGTACATACCTAGCTGCTCGGTGATTATGCCTTTTGCCAA
GGAACAAAATTGTATGCCCCCCAGAGACGACCCAACACAACACGCACGTG
CACAGCACATGCCTGCGACGCACGTAGCCCCGAAGCTTGGTAGGAATGGT
TTTCTTGATCTAACGCCTTCCCTACAACCCTCCACACACGTGGTGCCGAT
AAGCCACATAAACCCAGACCAGGGGCCTCTCAAGTTCTCCGAAAACTCCT
ATCAATTCCCTGGTGCGCGGAGTAATTTGGCACGCACACGTATGTTGCAT
GGCCTTCTTTTCTCTTTTCATTCATATCTCATTTTTCGAAGTTATTGTAA
AGGGGACCTGTGGAGGCAAAATCAACGCGCGCGAAATGCTGTGACAAAAC
ACATGAATGGCCGTCCTTTTCATCCATCTCTAATTTTAAGCTTTGTACGG
CACTGGAGGCAATCCAACGTGCGCGACGTGTGACATATACCGTATGCATA
CATCCATACCGTACATAGGAGATGGTACCCCCACTCATAGACCGACTTTC
AAATCTCGATTGCTCCACAACCAACCACGGGGGGGGTGGGAATGAGCCCC
ATATGTCCACGGACGGTACATGTTACCCTCGACGGTTGTTGGCATTGTGC
CGGAGCAAAATCACCACCGCTTTTAGGGTGTTTGATTTCATTAATTGTTT
TTGGTTTGGGAAGAACATGTCGAAATTTGAAAATCGGTCATGGGGGTTGC
TGTCTCTCCGCCCCTTGCTGTCAAGAAACGGAGACTCCTGTTCATTTTCA
GGCGGCGTGGGGCGGTCGATGTACCAGGAGTTTTCCAGTATTGATCATTC
GACCAAACAGAAGGCAGTAGAAACCGTACGCACCCACACGATGGAATTGC
AACTGCTGTTGTTTGACAGTTTGGTCGGGCCGGGCGAACCTGCAAGAGAG
ATTCGTGCTGTAGAAGGTCTCGAGAATGAGAGTACGTACCAACACAGCAG
TTACTGGCTGATCACCGCGACCTCGCTCCTCCTGAACAGCTTCGTCGATA
AATTACCTTCTGCACCTTCTCCAGCGAACCGACAAAGCCCCCGCCTCCTT
CCACCACGCCTTCAGGGGGCCTCATCAAGAACGTCGGGGCCAGTAGCATA
ACGGGGCCTCATCAAGAACGTCGGCGTCGGGTCCGGCCTCACACTTGTTA
TTTCATCGCCGCCGCCCGTCGAGCACAAGGGTTTTTAACATTTATTTGTG
CATACTATAAAGGATGATGCACCGTCCTAACTACAGAGTAGAGGTCCTGT
TTGTTGCCGATATGTCCCCTGAATATTCACCGTACTCCTGCTGTGCCGGA
ACCTGCACTATTCAAAGTATTGAGGATGACAATTGGCGGTTCAGTGTGTG
CCCGCCGAAAACACCGGCACTAAACCGGGCACCGGCACTAATCAGGGACC
GACCTGTACTGTTCCATAGGTACTTCAGTATATTACGATGTTTGTGGAAG
AAGGAGCCCCTGTTTCTGTACAACCGGAATGTTTCTCCGCGGCATGCCCC
AGGATGCGGCCAATATACGGAGGCATGTCTGTCTGCGATACAAGTGAAGG
AAAGAGTCCAGGCCGCAAGAGTTGTTGCCAAGGTAGTCGGTAGGCATAGT
CGGCAGAAAGACTATGCCCGCGACGGATAAGACAGAAAGGAAATCACGCC
CGGAGAAAGATGGTCCGAATCGCGATCGAAAGAGAGAGCTTGCAGCAAAC
AACAGCAGTGCCGCGAAAGCGATCAGGGAAGGCGGTGCACTACAATGGCC
TAGCTATTCACATCGGGTACATCATGTCTCGTACAACGTGCTACAGAAGT
CACAAACGCGCTCTCGACAAGCAGAAGCGTGGTTCGGTCTTTTCCCCCGG
CACAATGCAGCGAACTCATGCATCTCGGAAGAGTCCGATGAAAGTTCCGC
CTGGCCTGCTTGCTGACGACAGCAGCAGTGCTTACATCTACGAAAAATTA
GTTGCATTTATGGATGGACCAGTCCTCCTTATTTCAATGTTTTAAGAACC
CGAACACAATTTGTGCACCATCGAGAGCACACACACCATCTATAGGACAT
GCCAAGACTGCCCATCAGTCAGTGGTCTCGACGTTTCATTACCTCCAGCG
AATCAATCGTGACCGCCGTCTGGCGCATCACCTTTAGAAAAGGTGTCCAC
GAGGATGACTGGATCATGTGGCGCCGTGAGCGTGGCCGCTTGGGGTGACG
GACGGGCCCTGAGACAGCAGTGACCTCCGTTTTGGGAGGTCTAGGCGCAT
CCGGACCCGAGAAATGGCCCACAGAAAATGGAAAATCATTGTTTTTGGTC
TGTAGGCTATTTCTTGGATCCGGCTGCAGGTATTGTAGACCCCCCCCAAA
ACGGGGGTCGCTGCTGTATCAGGGCCCGTCCGTCACCACGCTCACGGCGC
AACACGATCCAGCCATCCTCATGGACACCATTCTACAGCTGATGCGCCAA
GAGCTGCTGCTGCTGCTGCTGCTGCTTCTTTGATTGTCGCGGCCGCACGG
CCTAGTTAACCGCGAGCGCAAAACGCCCGGGGTGGAAGGTAAGCGACCAG
CTACTCACACTGCTTTATCCGCAACAAGCTCTAGCGCTAATGCCACGGCT
GTGCTTGACTTTGTCGTCCGTCTGCACAACGAACAAGCTGGACCGGAGGG
AGAGGAGGGACCCCCTAGTACCACCAAACTACCAGTAATATTGATACTCT
AGTGCTAAACGCCCCGATCGTGCCGTGATGTTGTTGTTGTCGTCGTCCGT
CTGTAGAACGAACAAGCTGGGTGGGCGGGAGAGGGGGCACCCACAAACAC
TAAATACTCTATAGTGCCTTTAACGCCCCGACTGTGCTGGCTGCGATGTT
GTCGTCGTCGTCGTCTGTCCGTCCGTAGAACGAGAACGCTGCATCGGCGG
GAGAGGGGGACCCCCCTCAGGTCGGGTTCTGGACGGCGTTCGCCAACAGC
GTGATCATGATCATCGCCACCGAGATCGGAGACAAGACGTGAGTAGTAAT
AGTCCCCCCCCCTCCCGGGCCTCCCCAGCCCCCCACTCGGTGTTTGCCAT
CGGGGTTTGGGTTTTCGTCGCTTGGCAATGACGTTGTAAAACAAGCCCCC
CACTCGGTGTTTGCCATCGGGATTGGGTTTGCGTCGAACGACGTTGTAAA
GAAGCCAATTCAGTGAACTCGGCAACCAGGTTACCGTTTTTTTTTTTTTT
TTTACCTCGGTTTTTTTTTTTTGCGGTAACCATGAATGGTGGTCGAGTAG
ATCATGTTGTGCGGGGTCGAGAACCCTCACTCCGCGCAACGGGGGATGAT
CGCACCATCTTGTGTTAAAATGGTCAAGCATCCTCGAGGCAGTTACTCAG
TGCTACAACTGTCTCTGGAAATGAAAGCACCAGGAAATAAATTAAGTCAT
ACGCAGCTGTCATCCGTACGCAAGGAGGTAAGCAGAAGATGCCGAACACC
CTTAGCAGGATGCAGCGCACCCTTCATGCGACTCGCCGAATACCTTACGG
CGCCTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTG
CTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGG
CATGCACGACTATGAGCACACACACACACCGGCTTTATGGGCATGAGAGG
TCAATTATAACGACTGCGGCATGCACGGCTATATTGGACACCCACTCTGC
TTGCACGAGCGGTGCAAATGTGTCCGTTCACTTGGGGTCCCCGCGGTCGA
GAAAACGAAGCGTTTGAGACATGACACAAAACTCACCCCGACACGTGGTT
CTTTCTTCGCAGGCTTGACGAATGAACGTCTTACGTGTAGGGATAGATGA
TGCGACACGTGATTCCCTCGCGCGGTTGACGCGTACGACAAGCGTATAGG
ATGATGTATTCAAGAGATCTATATTGCACCTGCACGTTTTTCATGGCCCT
TTCATGGTGGGGCTCTAGATATGATACTGCCTGGATGCTGCTGGTGCGTC
TACTACTTCCGCTGCCGCTGCTACTGCTTGATGCTGCTGCTGCTACTGCT
TGATGCTGCTGCTGCCGCTGCTATTGCTTGATGCTGCTGCCGCTGCTATT
GCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTTGATGCTGCTACTACTGCCCATGCTGCTGCTGC
TACTGCTGCCGCTGCCGCAGTTTCTTCATAGCGGCGATCATGGCGATGAG
CCACCCCCGCCTCGCCGTCTTCGGCGGGGCCGTAGGCGCGCTGGCCGTCA
TGACGGTGCTCTCCGCCGCGCTAGGCTACGCGCTGCCGGCAATCCTCCCG
AAGACCTACACGCACTACGCGAGCGCGGTACGTACGCTTGGCAAGACATG
TTAGATGAGCGTGTGGTGGTATGTGGGCACATCTTTCATAGGCTTGTGTG
TGTTTTTTTTTTATATAATTAGCATCGACCGCGCTAACGGGTTGACCAAT
GAAAATACGTCAGTCGTCGTGCGGTTGAAAACACAAAAAGCACTTCTAAA
TGCCGTAAACTGGGACCCCGTGAGGGGGTGGCATGGGGGAGGTTGAGCTA
TTCTCCGGATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTTTTGGA
ACTGCCTACATTGTACCCGCCGAAATTCCACTGATTCTTTTCTTTGGCCA
CTATGTTTCCTGAAAAAACACCTCCGTAGGCTACTGGTTCTTGTTGTGCA
TGCGCGGGGGAATGGGTGGGGGGAGGTGGACGGCGATATTGTCTGTGAAT
GTACGTGTGTGTGTGTCTCTCTCTCTCGCGCGCTCTTTTGCATTTTTCCT
GGGTTTCATACACGCATCCGCCCCCGCCCCCCCCCGCCTTCCCTCTCCTT
TTTGCCTCGTTGCGAAATCGGAAAAATACGAAACCGCCACGCTGCTTTCT
CCGGGAACCGCAGCTGTTGTTCCTGTACTTTGGGTTTAGGATGCTGAAGG
AGGGCATGGAGTCGCACGGAGGTCCATCGGAGGAGCTTACGGAGGTGGGT
TTTGCGGTGTCGGCGCGTGTGCTGCGTTTTCACGCTCGCGGGCTCTTGTC
GAGAGGGTTTTGCACGAAAAAAAGTGACTCAAGTTCCTTGTAATATTTAC
AGAGTGAGACATGGGCAGGCAAGCGGAGCCTAGCGTGTCAAGTCCATCAC
GTCACACCCATCAAATAGTATCTGCGTACCCCCGGTCATGGTTAGTGGGG
GATGGAGTTGTGATGATGATTGTAGTGTTGCTAATGTTTGCGGTTGTTGC
CAACTCCCCCCCCTCCGGAGATCTCGGAGATTCGTGTTCTACCGAGTACG
CACACACAAGACAAGGTGGGTGTGGTGTCCATTCCATGCAGTCGGGTGCC
CTCTGTACAGAACGTGCCACCACGTAACAGCTCAGTCTTGAGCCTAAAAA
CATCCAGAATCTAAGATCTTGGCCATAAGAACCAGTACTCAGCCGTGAAA
GAAGCCTACCTGTACACTAAAACCTATGTAGTCGCCGTGCGTGTAGGTGC
TGTACCCCATTATGAGAAAAAATAGGGAACGAGCCTCGCCTAATTTAAGG
GGTGCTTTGAGTGGCGGCGGCTCGTTCTGCAGTGTGGGTTGTGTGCCAAG
CGCTTTCCCGGACTATGGTGGGGACTCCCGCACTGCTGTGCGATGTGTCA
AACCATCCTGAGCATTCCGTCTGTGTCGAGTCAGTTTTTTCACCCGCACT
AGCTGTGCAATGTATTGGCCACCTTGATCATTCCATCTGTGCCAGCCAAT
TTAACCCGCAGTGTAGAGGACCCCCGACTGCAGATACTTCTTTTTTTGTA
TCCTTGCCGATGTTTTACCTCGTGACCGTAGGGCGCCGGGCCAGCTGCCC
AGGCCCATCTGTGCGTGTTTGTGATGCGATTTACCGTAGGTGACATGAGA
TATCACACACCCCTGGATCGATTCTCCAAGCTCGGAGGACTCCAGAGCAG
AGGAGAGTGGCGGGGCAGAAAAAATGGCGGGAGGCGTTGCGACCGTCCCG
TCGAGAGCTTTCCGAAAACTTGTTGTTCGATTTTTACATGTTGCTCGTCG
TGCCTTGAAAATCGGCCAACGGGGTGTGATGCCTTGCACCATACGTACCC
TGTATCCACTCATGTTGCACTTGCAATCATTCAGCGACCATGGCGGTGCC
GCACCCCCCGCCCTCTTTTGGGAAAAGCCGTGGCATTTTTTTTCTTGTTC
GTCACTCTCGAGACAGCGCTCATACACGGGAAAATCGACCGGCCAAGTTA
AGACTGTCCGGAGAGATGGGAACGGTTTTTAGTTGGAAGGCAAAAGCACC
AACGGACATACCATTCCTGCCGGGCACGAGCTGCTGTCTCCAATCAGTTG
TCACACAGCATGAGGGTTCCTTTCCCTTAGGCCCCCCCTCCCCTCCCCTC
CCCACCCCTTGTCTTCGACTTGCAGGTGGAAGAAGAGTTGGCGAAGAAGA
GGGAAGGGGAAGCGAAGAAGTCGGGGCCGGCGGCGTTCGACATGGAGGGA
GGGGGTGCTATCGGGGGCGCCGGGGGGGGGGGGTTGCGAGCCGCCGGGGG
GCGGCGAGCGAGCACGGCCGCCAAGTCTCTCATGCAGGCAAGGCTCTCAG
AGGCAGCAGTATGTAGCAGTAGCACTACGCAGCCCCGAGGCCCAAAACCA
ACTCGTGTGGCGTAAGATGTCATGTCGGTTTCGCCCAATTCGAGTGTCTG
GTGATGTTTCGGTTTCCATTGCTCTACGTAAAACGGAGGGTCGTGAATAG
GAGGAAGCGAATCGATCGTTACGCTCTCGTGTGCCGACGGGGTTATGTGT
CGTGATGCACAGCGGAGCATATAGCCTCCTGTAGGTGCCGCCGCAGATGT
GCCGCCCTGGCCGATGCGACGTTGTGGTTGGGGGGCAGCGTGATGAATTC
GAGGAAGCCTGTTGTTGATCCGGCCGTCTGCTCTTTGGGGCGAGGAGATT
TAGAATTGTGAGTTATGCTCCCCGCCTCCCGTAGCTGTCATCGACGGTGC
GTACCGTGCTTTGACGGAATATGTCTCCCCTCCTGCGGTAGCGTTGACCG
TGTCGTTCTGTGTGCCATACCGCAGACGCCGCTCACAAGAAGCGCCTACT
TTGAGTATGGCTGAATACCGGACAGCAGTTCTCAACGAATTGGGCACATC
CTGTTTGCTACGCCTGCATACTCTAGGCTGAGCCCAATTTTCGCCAATAT
TGATGTTGTTTGAGCACTCTTGAGCGTTGATTCTTGTGAACATGTTTCAT
TTTTTTAATGTATGAGCGTGCCGGCGCTACTACGTGTTTTCTTCCTTTCT
GGCGAAATCGGGACAACTTTCCCCCCAGACCGCCACACAACAGCCCTGGA
ATCCCCCCTCCAACCCTCCCAGATGTGGCATAACTGGTGTGCCGGAAGGT
GTAGACTGGATCCGGAAAAGAGACGGGACGAAAACAAAAAAACAAACTGC
TGTACCTAGTGCCCCACCCTCGATAGGATACGGAAAGCGTTTTGGAGCCA
CCTTTGGCGAAAGTTGAAAGGGGACGATCGGCCATCGGTGATCGGTTCAG
TGGGACCAATGCTTCGTCCTCTCGAGGCCGCGCGGTCCAACAACTAAGGC
ATGCAAAACATGAGTGCCCTTCCCCCCCCCCCCTTCCCTCTTTCGCGCGA
ACTTTTCTCTGCCGTGCCCCGATGTCCCAGGTGATCACGATGTCCTTCAG
CATGACCTTCTTGGCGGAGTGGGGGGACCGGTCTCAGATCGCGACGATCG
CGCTGGCGACCAACAAGGACCCGTTCGGGGTGACGGCGGGAGGCGTCGTC
GGGCACTCGCTGTGCACGGGCATGGCGGTCATCGGGGGGAAATTGCTGGC
TGCGCGGTGAGTGTGGTGTTGGTGGTGTTTTTTTTTGTTTTTTTTCTCCC
ATCATTGGACCCTGTCGTCTGCCCCTGTGGCCCCCATCCTCCACTTCTAC
TAGCTAGACGACCCAACCGGGGTCACATAGGAGGGGGGGGTTGGACCCCC
TCCTGCGGTTCCTGCCTGAGATATTTTCATCGCGAGAAGGGTTGTGGTCA
GCTGGTTGTCGTTCTGTCTGCGTGGTAAGTTGTTGTTGCTGCTGTTGTTC
TGTTGGAGATGATGTTTTGTTTTTTTCCCATGTGGTGGTTGAGCACATCG
GCTATCAGAACGGACATTCTCTCTCCCTCTCTCTCTCTTCGCTCCTTGCG
CTTTTATGCATCGTTTTTTTTTTTTCGAAAATTGACATATTCCGTCACGG
AAAAGCCTGATGCTTGTTTGAGATATCTAAAACACACCTGTTTCATTTTT
TTTCCTTTTTGTTGCTGTTTTTTTTTTTTTGGCAGGATCTCCGAAAAGAC
CGTCCACCTTGTCGGGGGAGCCCTGTTCCTTGTCTTCGCCTTGCACGCCT
TGGTGTTTGGCGAATAAAAAATAATATTAAAATAAAAGCGAGTCTGTCTT
GTTCGGTGCTGTACGCTGATAATACGTGGTGGTGCTAGTGTTTATTTCTA
TACCATCGTTTTTTGTTCGTTTGCCGTCGCATGTTATTAACAATCTTGGC
GAAGTGCGAAATGGCTGTTTTTGGTCTTGTTTCTTTCATGGATTTTCTTT
GGCTGGTGAGTTGCGAAACGGGTATTTGGTATTTTGTCCCATGTATGTAA
GATTAAGTACACCATAAGCCGCCTCACGGCTATCTCGCCCGCTTGTAGAT
GCTACCGCGTCACGGAGCAAGGGAGCGAGCTAGTCGTGTGATTTTTTTTC
TGGGATGAACCAATCCCCCCCAAGCATGGTGGGTTTTTTTGCATCAGCCG
CCGAGGCACGACAAAATTTTGTGCTGGAATGCCCCCAAAAACACGGTAAT
ACGGTAAAATACCGTTTGTTGCCGGATGACCCAGCCCGAAAATACGTTGG
ATTTTTTTTGTTCTGGGATGATGAGAAGCCTTACGAAGACACGGATCTGG
GGTGGTGATTATTTTCTCGAAGTCCAAAGCACAGCGAGGACGCGCAACGA
AAGGATGCGGAGATGGGTCGGGCCCGAAGAGTGACCGGGACGCGCTGCCC
TGTCGTTTTGCCAGCTTCTCGCTTGCGGCGGCAGGTACGGAGCCCCCCGG
TAGGCTCTATTCCGTGCGGGGGAATGAGAAAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1337419..1346850-

>mRNA_Ecto-sp6_S_contig10.549.1 ID=mRNA_Ecto-sp6_S_contig10.549.1|Name=mRNA_Ecto-sp6_S_contig10.549.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=882bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1337419..1346850- (Ectocarpus species6 EcLAC_371)
ATGGACAAGCGAGTACGCGTGGCGGCCGTGTTGGCTGGGTTGGTGGGCGT
GGCTATGGCGCAATCGGGAGTCGGCAGCAGCAGCGGAGACATGAACGAGA
ACGCTGCATCGGCGGGAGAGGGGGACCCCCCTCAGGTCGGGTTCTGGACG
GCGTTCGCCAACAGCGTGATCATGATCATCGCCACCGAGATCGGAGACAA
GACTTTCTTCATAGCGGCGATCATGGCGATGAGCCACCCCCGCCTCGCCG
TCTTCGGCGGGGCCGTAGGCGCGCTGGCCGTCATGACGGTGCTCTCCGCC
GCGCTAGGCTACGCGCTGCCGGCAATCCTCCCGAAGACCTACACGCACTA
CGCGAGCGCGCTGTTGTTCCTGTACTTTGGGTTTAGGATGCTGAAGGAGG
GCATGGAGTCGCACGGAGGTCCATCGGAGGAGCTTACGGAGGTGGAAGAA
GAGTTGGCGAAGAAGAGGGAAGGGGAAGCGAAGAAGTCGGGGCCGGCGGC
GTTCGACATGGAGGGAGGGGGTGCTATCGGGGGCGCCGGGGGGGGGGGGT
TGCGAGCCGCCGGGGGGCGGCGAGCGAGCACGGCCGCCAAGTCTCTCATG
CAGGCAAGGCTCTCAGAGGCAGCAGTGATCACGATGTCCTTCAGCATGAC
CTTCTTGGCGGAGTGGGGGGACCGGTCTCAGATCGCGACGATCGCGCTGG
CGACCAACAAGGACCCGTTCGGGGTGACGGCGGGAGGCGTCGTCGGGCAC
TCGCTGTGCACGGGCATGGCGGTCATCGGGGGGAAATTGCTGGCTGCGCG
GATCTCCGAAAAGACCGTCCACCTTGTCGGGGGAGCCCTGTTCCTTGTCT
TCGCCTTGCACGCCTTGGTGTTTGGCGAATAA
back to top