prot_Ecto-sp6_S_contig10.532.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.532.1
Unique Nameprot_Ecto-sp6_S_contig10.532.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length318
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.532.1 vs. uniprot
Match: D8LSN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN9_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 7.200e-180
Identity = 289/317 (91.17%), Postives = 292/317 (92.11%), Query Frame = 0 
Query:    1 MRFSPCWHAATISLLQTCSAGEGRHVHHARDPPPLATPTGSSPPLPLMAYAFFPSTRRALHPATTITSSRRSSVSKPRLGHRHRSATQRTTRMSKAARPGADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDPDWTLSRVPNPVGALLYAAEPEERAAEEMVALGESAAALPCFRLGGTDGTAVVVDVSSGHVVGVRVDPVGDNAAGXXXXXXXXXXXXXXXXXXXXXXGLVFLPGVRPSVWESGDMGTVLRIASSACTGAGKTLVVTXXXXXXXXXXXXXXXXXXXXMALLIEPMPELWEAGLLYL 317
            MRFSPCWHAATISLLQTCSAGEGRHVHHARDPPPLATPTG+SPPLPLMAYAF PSTRRALHPATT TSSRRSS SKPRLGHRHRSATQRTTRMS+AARPGADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPED DWTLSRVPNPVGALLYAAEPEERAAEEMVALGE+AAALPCFRLGGTDGTAVVVDVSSGHVVGVRVDPVGDNAAGXXXXXXXXXXXXXXXXXXXXXXGLVFLPGVRPSVWESGDMGTVLRIASSAC GAGKTLVVT                    MALLIEPMPELWEAGLLYL
Sbjct:    1 MRFSPCWHAATISLLQTCSAGEGRHVHHARDPPPLATPTGASPPLPLMAYAFSPSTRRALHPATTTTSSRRSSASKPRLGHRHRSATQRTTRMSEAARPGADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDTDWTLSRVPNPVGALLYAAEPEERAAEEMVALGETAAALPCFRLGGTDGTAVVVDVSSGHVVGVRVDPVGDNAAGXXXXXXXXXXXXXXXXXXXXXXGLVFLPGVRPSVWESGDMGTVLRIASSACAGAGKTLVVTTTVLGVGGTGAAEDGTTPPPMALLIEPMPELWEAGLLYL 317
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN9_ECTSI7.200e-18091.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..317
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1180668..1181678 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.532.1mRNA_Ecto-sp6_S_contig10.532.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 1180668..1182066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.532.1 ID=prot_Ecto-sp6_S_contig10.532.1|Name=mRNA_Ecto-sp6_S_contig10.532.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=318bp
MRFSPCWHAATISLLQTCSAGEGRHVHHARDPPPLATPTGSSPPLPLMAY
AFFPSTRRALHPATTITSSRRSSVSKPRLGHRHRSATQRTTRMSKAARPG
ADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDPDWTLSRV
PNPVGALLYAAEPEERAAEEMVALGESAAALPCFRLGGTDGTAVVVDVSS
GHVVGVRVDPVGDNAAGGAAGSSAAMGIVAAAQQQRDGGGLVFLPGVRPS
VWESGDMGTVLRIASSACTGAGKTLVVTTTVLGAGGTGAAEDGTTPPPMA
LLIEPMPELWEAGLLYL*
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