prot_Ecto-sp6_S_contig10.528.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.528.1
Unique Nameprot_Ecto-sp6_S_contig10.528.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length243
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.528.1 vs. uniprot
Match: D8LSP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSP3_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 1.560e-126
Identity = 189/198 (95.45%), Postives = 193/198 (97.47%), Query Frame = 0 
Query:    1 MWSRPLSALLSTFLWSTQAFLVPLFATGRGKIRCRSPGYPQQQLPAEGGRPKIAAATRGQRQERTSATLAMSDNTGSCDRKGFLSDLTRNVAGAGLAAITLGPNMAVAKQAADSPVDWKAEFGSVKKATDLVLKDLKTLATDGDWEQLMEQAKGYDQSIRKGLMGNVRKKMPKEIKGDAMTYRNNITFDLIAINKASR 198
            MWSRPLSALLSTFLWSTQAFLVPLFATGRG+IRCRSPGYPQQQ PA+G RP IAAATRGQRQERTSAT AMSDNTGSCDRKGFLSDLTRNVAGAGLAAITLGPNMAVAKQAADSPVDW AEFGSVKKATDLVLKDLKTLATDGDWEQLMEQAKGYDQSIRKGLMG+VRKKMPKEIKGDAMTYRNNITFDLIAINKA+R
Sbjct:    1 MWSRPLSALLSTFLWSTQAFLVPLFATGRGEIRCRSPGYPQQQPPAQGRRPTIAAATRGQRQERTSATSAMSDNTGSCDRKGFLSDLTRNVAGAGLAAITLGPNMAVAKQAADSPVDWTAEFGSVKKATDLVLKDLKTLATDGDWEQLMEQAKGYDQSIRKGLMGDVRKKMPKEIKGDAMTYRNNITFDLIAINKAAR 198
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BLAST of mRNA_Ecto-sp6_S_contig10.528.1 vs. uniprot
Match: A0A835YZ48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ48_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.280e-16
Identity = 48/98 (48.98%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:  107 VAKQAADSP---VDWKAEFGSVKKATDLVLKDLKTLATDGDWEQLMEQAKGYDQSIRKGLMGNVRKKMPKE---IKGDAMTYRNNITFDLIAINKASR 198
            VA  A + P   VDW AEF +VK A     + L+     GDW+ +M QA+G DQS RK LMG +RK+ PKE   +K +A+   N +TFDLIAINKA R
Sbjct:   25 VAPAAKEEPAVDVDWSAEFSAVKDAYAAAKEGLEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGR 122
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BLAST of mRNA_Ecto-sp6_S_contig10.528.1 vs. uniprot
Match: K0TE44_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TE44_THAOC)

HSP 1 Score: 55.1 bits (131), Expect = 1.390e-5
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:  132 VLKDLKTLATDGDWEQLMEQAKGYDQSIRKGLMGNVRKKMP-KEIKGDAMTYRNNITFDLIAINKASRYGR 201
            V+  L  L   G +E++++  K  D   RK  MG  RK +  K++KGDA++  N +TFDLI IN++SR G+
Sbjct:  112 VVSTLSNLIDGGSFEEILQYTKESDAYFRKAKMGRARKLLTDKDLKGDAVSMSNAVTFDLIGINRSSRPGK 182
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSP3_ECTSI1.560e-12695.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZ48_9STRA2.280e-1648.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0TE44_THAOC1.390e-540.85Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.853

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1145362..1150304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.528.1mRNA_Ecto-sp6_S_contig10.528.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 1145362..1151018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.528.1 ID=prot_Ecto-sp6_S_contig10.528.1|Name=mRNA_Ecto-sp6_S_contig10.528.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=243bp
MWSRPLSALLSTFLWSTQAFLVPLFATGRGKIRCRSPGYPQQQLPAEGGR
PKIAAATRGQRQERTSATLAMSDNTGSCDRKGFLSDLTRNVAGAGLAAIT
LGPNMAVAKQAADSPVDWKAEFGSVKKATDLVLKDLKTLATDGDWEQLME
QAKGYDQSIRKGLMGNVRKKMPKEIKGDAMTYRNNITFDLIAINKASRYG
RRWWVKIPGTQNRGGLRKLEIVYQGIVPCPCAHWSNGEHSRC*
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