prot_Ecto-sp6_S_contig10.522.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.522.1
Unique Nameprot_Ecto-sp6_S_contig10.522.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length72
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.522.1 vs. uniprot
Match: D8LSP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP8_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.040e-10
Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:   28 FLQGQKEIAKMLAETCSVSSRPPLSTRKSLSSFCSRQTEPQAKL 71
            F + ++   +   +TCSVSSRPPLSTRKSLSSFCSRQTEPQAK+
Sbjct:   29 FSKVRRRSPRCWRKTCSVSSRPPLSTRKSLSSFCSRQTEPQAKM 72
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSP8_ECTSI1.040e-1068.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1097134..1098956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.522.1mRNA_Ecto-sp6_S_contig10.522.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 1097134..1098956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.522.1 ID=prot_Ecto-sp6_S_contig10.522.1|Name=mRNA_Ecto-sp6_S_contig10.522.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=72bp
SGEVLGHFSHRLRRRAGNVDNEGRSGVFLQGQKEIAKMLAETCSVSSRPP
LSTRKSLSSFCSRQTEPQAKL*
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