prot_Ecto-sp6_S_contig10.491.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.491.1
Unique Nameprot_Ecto-sp6_S_contig10.491.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length173
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: D8LST0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST0_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 6.050e-123
Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0
Query:    1 MATTLNRIINHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRLPMDSAQSLLEKSDRKLIDRRPTDIKKYQDDNYIEWP 172
            MATTLNRIINHKAKWHLIDA GQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKK+YRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRLP DSAQSLLEKSDRKLIDRRPTDIKKYQDDNYIEWP
Sbjct:    1 MATTLNRIINHKAKWHLIDASGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKVYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRLPTDSAQSLLEKSDRKLIDRRPTDIKKYQDDNYIEWP 172          
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: A0A835ZK23_9STRA (Ribosomal protein L13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK23_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.550e-58
Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 0
Query:   10 NHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHD 133
            +H+  WHL+DA+ QIVGRLA QIAP++ GKHKPT+ PN  CGD+VVV+NA  V+FTG KW  K+YRWHSG+PGGLKER    QL R+PEEILRRAVMGMLPKN LR RM+ +L IY GP+HPH+
Sbjct:   11 SHRPMWHLVDAKDQIVGRLATQIAPLLVGKHKPTYSPNVACGDIVVVINAADVQFTGKKWTDKVYRWHSGYPGGLKERTPKQQLERRPEEILRRAVMGMLPKNKLRSRMILQLKIYEGPAHPHE 134          
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: A0A7S2R604_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R604_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.830e-53
Identity = 86/140 (61.43%), Postives = 102/140 (72.86%), Query Frame = 0
Query:    7 RIINHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRLPMDSAQSLLE 146
            RI    ++WHL+DAR Q+VGRLA QI  I+RGKHKPT+ PN D GD VVV+NA+ V  TG+KW++K YRWHSG+PGGLK R A D   RKPEEILR AV GMLPKN LRKR + +L IY GP H  +  L    A+SLLE
Sbjct:   13 RIRGTASRWHLVDAREQVVGRLAVQIGGILRGKHKPTYLPNADIGDTVVVINASEVCLTGSKWRQKQYRWHSGYPGGLKARSARDMAARKPEEILRHAVAGMLPKNKLRKRCLARLRIYAGPKHEFEAELGA-GAKSLLE 151          
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: B8BX67_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BX67_THAPS)

HSP 1 Score: 171 bits (432), Expect = 1.140e-51
Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKR-MVTKLLIYPGPSHPHDDRLP 137
            WHL+DA  Q VGRLA  IAPI++GKHKPT+ PN DCGD VV+VNA+ V  +GNKW  K+YRWH+G+PGGLKERPA D L RKPE ILR+A++GML +N+LR+  M  +L IY G  HPH+ +LP
Sbjct:   12 WHLVDATSQTVGRLATTIAPILKGKHKPTYRPNGDCGDYVVIVNADKVHLSGNKWDDKIYRWHTGYPGGLKERPAKDMLERKPEFILRKAILGMLYRNNLRESYMEPRLKIYAGSEHPHEAQLP 135          
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: A0A3F2S0U4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S0U4_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.600e-51
Identity = 75/119 (63.03%), Postives = 92/119 (77.31%), Query Frame = 0
Query:   12 KAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSH 130
            K  WH++DA+GQ++GRLA+Q+API+RGKHKPT+ PN DCGD VVV+NA  +E TGNKW  KLYRWH+G PGGLK+R A D   RKPEE+LR+AV GMLPKN +R     KL I+ G  H
Sbjct:    9 KVVWHVVDAKGQVLGRLASQLAPILRGKHKPTYAPNVDCGDYVVVINAKDIELTGNKWNNKLYRWHTGHPGGLKQRTAKDLFERKPEEVLRKAVFGMLPKNRMRALQDKKLKIFLGDEH 127          
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: F0WMW5_9STRA (50S ribosomal protein L13 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WMW5_9STRA)

HSP 1 Score: 169 bits (427), Expect = 6.970e-51
Identity = 76/125 (60.80%), Postives = 96/125 (76.80%), Query Frame = 0
Query:   12 KAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRL 136
            K  WH++DA+GQIVGRLA+Q+API+ GKHKPT+ PN DCGD +VV+NA  + FTG+KW +KLYRWH+G PGGLKER A +   RKPEEILR+AV GMLPKN +RK  + KL I+    H   D++
Sbjct:   11 KVCWHVVDAKGQIVGRLASQLAPILCGKHKPTYAPNVDCGDHLVVINAKDLVFTGDKWNQKLYRWHTGHPGGLKERTAKEMFARKPEEILRKAVYGMLPKNKMRKLQIQKLKIFLDEEHDFQDKV 135          
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: A0A448Z8K8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8K8_9STRA)

HSP 1 Score: 170 bits (430), Expect = 8.060e-51
Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYPGPSHPHDDRLP 137
            WHL+DA+ Q VGRLA QI+ I++GKHKPTF PN D GD VVV+NA  V+F+G KW  KLYRWHSG+PGGLKER A D + RKPEEIL++AV+GML +N+LR + +  +L IY GP HPH  +LP
Sbjct:   12 WHLVDAKNQTVGRLAGQISQILKGKHKPTFRPNKDMGDHVVVINAEKVQFSGKKWNDKLYRWHSGYPGGLKERSARDMMARKPEEILKKAVLGMLKRNNLRHQSIEPRLRIYSGPDHPHTAQLP 135          
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: A0A7S4HN68_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HN68_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.970e-50
Identity = 76/123 (61.79%), Postives = 96/123 (78.05%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYPGPSHPHDDRL 136
            WHLIDA  Q VGRLAA +API+RGKHKPT+ PN DCGD VV+VNA  V F+GNKW+ KLYRWH+G+PGGLKERPAD  L RKPE +L++A++GM+ K +L+   +  +L +Y GP HPH  +L
Sbjct:   12 WHLIDAADQTVGRLAATVAPILRGKHKPTYRPNADCGDFVVIVNAEKVHFSGNKWKDKLYRWHTGYPGGLKERPADMMLERKPESVLQKAILGMVHKGNLKHGYIEPRLKVYAGPYHPHKSQL 134          
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: A0A7S3Q0X2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0X2_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.460e-50
Identity = 74/124 (59.68%), Postives = 98/124 (79.03%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYPGPSHPHDDRLP 137
            WH++DA  Q VGRLAA IAP+++GKHKPT+ PN DCGD VV+VNA  V FTG KW  KLYRWH+GFPGGLK+R A + L R+PE+IL++A++GM+ +N+LR + +  +L IY GP+HPH  +LP
Sbjct:   12 WHIVDASTQTVGRLAANIAPLLKGKHKPTYRPNGDCGDYVVIVNAEKVNFTGKKWNDKLYRWHTGFPGGLKQRRAKEMLERQPEKILKKAILGMIHRNNLRHKYIEPRLKIYSGPNHPHTGQLP 135          
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Match: A0A7S2UNE7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNE7_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.570e-50
Identity = 73/124 (58.87%), Postives = 97/124 (78.23%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYPGPSHPHDDRLP 137
            WHL+DA+ Q VGRLA Q+API++GKHKPT+ P+ DCGD+VV++NA  V F+G KW  KLYRWH+GFPGGLK+R A + L RKPE+IL++A++GML +  LR + +  +L IY GP HPH  +LP
Sbjct:   20 WHLVDAQSQTVGRLATQLAPILKGKHKPTYKPHTDCGDIVVIINAEKVHFSGKKWNDKLYRWHTGFPGGLKQRTAKEMLQRKPEDILKKAILGMLSRTKLRHKYIEPRLKIYTGPIHPHSAQLP 143          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST0_ECTSI6.050e-12398.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZK23_9STRA1.550e-5867.74Ribosomal protein L13 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2R604_9STRA9.830e-5361.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BX67_THAPS1.140e-5162.90Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A3F2S0U4_9STRA2.600e-5163.03Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
F0WMW5_9STRA6.970e-5160.8050S ribosomal protein L13 putative n=2 Tax=Albugo ... [more]
A0A448Z8K8_9STRA8.060e-5162.90Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4HN68_9STRA1.970e-5061.79Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3Q0X2_9STRA2.460e-5059.68Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2UNE7_9STRA3.570e-5058.87Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10coord: 1..169
e-value: 1.2E-58
score: 199.5
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 2..136
IPR005823Ribosomal protein L13, bacterial-typeTIGRFAMTIGR01066TIGR01066coord: 11..137
e-value: 6.2E-50
score: 166.7
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 14..135
e-value: 4.6E-53
score: 178.7
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 4..148
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 15..146
score: 28.555
NoneNo IPR availablePANTHERPTHR11545:SF239S RIBOSOMAL PROTEIN L13, MITOCHONDRIALcoord: 4..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:727064..729440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.491.1mRNA_Ecto-sp6_S_contig10.491.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 727064..729561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.491.1 ID=prot_Ecto-sp6_S_contig10.491.1|Name=mRNA_Ecto-sp6_S_contig10.491.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=173bp
MATTLNRIINHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDC
GDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEI
LRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRLPMDSAQSLLEKSDR
KLIDRRPTDIKKYQDDNYIEWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036899Ribosomal_L13_sf
IPR005823Ribosomal_L13_bac-type
IPR005822Ribosomal_L13