prot_Ecto-sp6_S_contig10.487.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.487.1
Unique Nameprot_Ecto-sp6_S_contig10.487.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length94
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.487.1 vs. uniprot
Match: D8LST2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST2_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 3.770e-41
Identity = 87/93 (93.55%), Postives = 89/93 (95.70%), Query Frame = 0 
Query:    1 MRKGYPARLFNHSCNPNVYLYTGCETQVGDDPVYLDALLXXXXXXXXXXXXXXXXXXCTVIAEFHGEGTKPAEAQERIAAYGDTTRELGQEMQ 93
            MRKGYPARLFNHSCNPNVYLYTGC+ QVGDDPVYLDALLXXXXXXXXXXXXXXXXXXCTVIAEFHGEGTKPAEAQERIAA  DTTREL +EMQ
Sbjct:    1 MRKGYPARLFNHSCNPNVYLYTGCKVQVGDDPVYLDALLXXXXXXXXXXXXXXXXXXCTVIAEFHGEGTKPAEAQERIAACRDTTRELEREMQ 93
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LST2_ECTSI3.770e-4193.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.270.10coord: 19..81
e-value: 5.6E-7
score: 31.2
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 29..61
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 2..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:711235..713115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.487.1mRNA_Ecto-sp6_S_contig10.487.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 711235..713115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.487.1 ID=prot_Ecto-sp6_S_contig10.487.1|Name=mRNA_Ecto-sp6_S_contig10.487.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=94bp
MRKGYPARLFNHSCNPNVYLYTGCETQVGDDPVYLDALLKGYPARFLNHS
CSPNVYLCTVIAEFHGEGTKPAEAQERIAAYGDTTRELGQEMQ*
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