prot_Ecto-sp6_S_contig10.474.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.474.1
Unique Nameprot_Ecto-sp6_S_contig10.474.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length186
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.474.1 vs. uniprot
Match: A0A6H5KM84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM84_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 2.970e-49
Identity = 102/125 (81.60%), Postives = 105/125 (84.00%), Query Frame = 0 
Query:    1 MGRNQGSKPKDGAQKAGRKTNAEREKIAAQQRNQADGLARMLSRNPQAQPSSKRPRVSGDQSGEGSSAGARSASSAGDVDVIGDSGASSSTAAPTIGESTPPPAGTQQQQSPPGLDDEGDHSRVD 125
            MGRN GSKPKDGAQKAGRKTNAERE+IAAQQ+NQA   ARMLSR+PQAQPS KRPRVS DQSGEGSSA ARSASSAGDVD  G         APTIGESTPPPAGTQQQ SPP LDDEGDHSRVD
Sbjct:    1 MGRNPGSKPKDGAQKAGRKTNAERERIAAQQKNQAAAFARMLSRHPQAQPSLKRPRVSEDQSGEGSSADARSASSAGDVDASGGXXXXXXXXAPTIGESTPPPAGTQQQ-SPPRLDDEGDHSRVD 124
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KM84_9PHAE2.970e-4981.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:608408..608975 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.474.1mRNA_Ecto-sp6_S_contig10.474.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 608237..608975 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.474.1 ID=prot_Ecto-sp6_S_contig10.474.1|Name=mRNA_Ecto-sp6_S_contig10.474.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=186bp
MGRNQGSKPKDGAQKAGRKTNAEREKIAAQQRNQADGLARMLSRNPQAQP
SSKRPRVSGDQSGEGSSAGARSASSAGDVDVIGDSGASSSTAAPTIGEST
PPPAGTQQQQSPPGLDDEGDHSRVDREEARAPPFPTVGEGFATAPTELVT
TTATTAAATSTAAAAAAAAASGGSARPAPSQQRQG*
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