|
|
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18792.1 vs. uniprot
Match: D8LEM5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM5_ECTSI) HSP 1 Score: 1962 bits (5082), Expect = 0.000e+0 Identity = 1124/1195 (94.06%), Postives = 1134/1195 (94.90%), Query Frame = 1
Query: 1 MPPTLAEDGQQQRKNSRKIKRLRDASCMRTRETAQDRWGRQRGGRKARWDKWDRQPSAFKSRLRSGNYAAAAAGGVGLGLGGGVVDEDAILDAAEEAFAFVDAATMKAAAAATAANAVLGSEGTSSDEGVGGGAGAEGDSDAATGVPACSVAVVDGGGVTGGGDVPPEAVAGDGAHTPSPTRRALQRXXXXXXXXXXXXXXXXXXXXVLDAGGCTDDAVALSPAPATTATAVSTPSSARSIANGVXXXXXXXXXXXGISGSRSKTAGSGGRRSSLRSPGGLSRAGXXXXXXXXGLGSGSYRGSPPPLHRRLSSPAGVGSGKKGQRQRQAGGSTAVGAGARGLGSAKKXKQASRSDAGRQGRAEXXXXXXXXXXXXXSLFESVFKDKLPSLTPRKAPPATPRLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDVDDXXXXXMEGDEDEVDESWIKTGINLTLFNSQAVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLPTLRALAHASHDHLMRTRELEDWAARVGVDIGEAAAAAVADGISGRSGAXXXXXXGRARVTGRDQSQTLGELLLFVLQTFPRFFLGMVPIDEAGGQQQGAWHHGDAGATTSGDGSGYGCVEDCGVAALAAEGCADVGGVDVHAGVCGGNTSSSGFMSPSQAWGSNGPGIGSPSSAEITENRRAAGDQEDGPAAAAAADGGDQCKSGCDGCDDHDGASFGEEGGLVGSPGGXXXXXXXXPTARSAASSGGDPAPASERCALAWPSLASGSPSPATGQRQNQEGVGNKQEPPWSPAWATAGVRSIEDVPLEEGAGLAVNRGSCGDGVWGQGMASKDLAWESEAGLGEEVGGDLRTATDGVAGAARALRFTAQEXXXXXXPEVTGDAGNRHASGRECSRESPVASAGAALAGDPFESGAGRLGLDEWPTAQEAKSSTPEKRSAVEPFERMDGASVSGSRGDATGGQEAGTQQPLPSATGCAAAGGGGLALELDLPAVALKEATRSLCNLYASHGAPAAGAEAAASADAPERLQPLALAGSTLCQLWPPSSALLLRRLLGTWPAGSARKEVAYLRLIAGVACAAPPLGVVCPGSRLPLMLFRRLAKCINSSNTKVAQEAAFLVQADFILMVYLAPDRRLMDLVTNALCANREHWSADVRNASDQTFDLMLDFL 3585
MPPTLAEDGQQQRKNSRKIKRLRDASCMRTRETAQDRWGRQRGGRKARWDKWDRQPSAFKSRLRSGN+AAAAAG G+GLGGGVVDEDA+LDAAEEAFAFVDAATMKAAAAATAANAVLGSEGTSSDEGVGGGAGAEGDSDAATGVPACSVAVVDGG VTGGGDVPPEA AGDGAHTPSPTRRALQRXXXXXXXXXXXX VLDAGGCTDDAVA SPAPATTAT VSTPSSARSIANGVXXXXXXXX G+SGSRSKT GSGGRRSSLRSPGGLSRAG GLGSGSYRGSPPPLHRRLSSPAGVGSGKKGQRQRQ GGSTAVG GARGLGSAKK KQAS SDAGRQGRAEXXXXXXXXXXXXXSLFESVFKDKLPSLTPRKAPPATPRLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDVDDXXXXX EVDESWIKTGINLTLFNSQAVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRL TLRALAHASHDHLMRTRELEDWAARVGVDI EAAAAAVADGISG XXXXXXGRARVTGRDQSQTLGELLLFVLQTFPRFFLGMVP+DEAGGQQQG WHHGD GAT SGDGSGYGCVEDCGVAA AAEGCADVGGVDVHAGVCGGN SSSGF+SPSQAWGSNGPGIGSPSSAEITENRRAAGDQEDGPAAAAAADGGDQCKSGCDGCDD+DGAS GEEGGLVGSPG XXXXXXXXPTAR+AASSGGDPAPASERCALAWPSLASGSPSPATGQRQN+EGVGNKQEPPWSPAWATAGVRSIEDVPLEEGAGLAVNRGSCGDGVWGQGMASKDLAWESEAGLGEEVGGDLRTATDGVAGAARALRFTAQE EVTGDAGN ASGRECSRESPVASAGAALAGDPFESGAGRLGLDEWPTAQEAKSSTPEK SAVEP ERMDGASVSGSRGDATGGQEAGTQQPLPSATGC AAGGGGLALELDLPAVALKEATRSLCNLYASHGAPAAGAEAAASADAPERLQPLALAGSTLCQLWPPSSALLLRRLLGTWPAGSAR+EVAYLRLIAGVACAAPPLGVVCPGSRLPLMLFRRLAKCINSSNTKVAQEAAFLVQADFILMVYLAPDRRLMDLVTNALCANREHWSADVRNASDQTFDLMLDFL
Sbjct: 1 MPPTLAEDGQQQRKNSRKIKRLRDASCMRTRETAQDRWGRQRGGRKARWDKWDRQPSAFKSRLRSGNFAAAAAGXXGVGLGGGVVDEDAVLDAAEEAFAFVDAATMKAAAAATAANAVLGSEGTSSDEGVGGGAGAEGDSDAATGVPACSVAVVDGGRVTGGGDVPPEAAAGDGAHTPSPTRRALQRXXXXXXXXXXXXPAATAAPAVLDAGGCTDDAVAASPAPATTATVVSTPSSARSIANGVXXXXXXXX---GVSGSRSKTVGSGGRRSSLRSPGGLSRAGSKGSGVGGGLGSGSYRGSPPPLHRRLSSPAGVGSGKKGQRQRQVGGSTAVGVGARGLGSAKKKKQASGSDAGRQGRAEXXXXXXXXXXXXXSLFESVFKDKLPSLTPRKAPPATPRLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDVDDXXXXXXXXXXXEVDESWIKTGINLTLFNSQAVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLLTLRALAHASHDHLMRTRELEDWAARVGVDIAEAAAAAVADGISGXXXXXXXXXXGRARVTGRDQSQTLGELLLFVLQTFPRFFLGMVPVDEAGGQQQGVWHHGDPGATFSGDGSGYGCVEDCGVAAQAAEGCADVGGVDVHAGVCGGNASSSGFVSPSQAWGSNGPGIGSPSSAEITENRRAAGDQEDGPAAAAAADGGDQCKSGCDGCDDNDGASLGEEGGLVGSPGXXXXXXXXXPTARNAASSGGDPAPASERCALAWPSLASGSPSPATGQRQNEEGVGNKQEPPWSPAWATAGVRSIEDVPLEEGAGLAVNRGSCGDGVWGQGMASKDLAWESEAGLGEEVGGDLRTATDGVAGAARALRFTAQEEDVGGDAEVTGDAGNWLASGRECSRESPVASAGAALAGDPFESGAGRLGLDEWPTAQEAKSSTPEKISAVEPVERMDGASVSGSRGDATGGQEAGTQQPLPSATGCTAAGGGGLALELDLPAVALKEATRSLCNLYASHGAPAAGAEAAASADAPERLQPLALAGSTLCQLWPPSSALLLRRLLGTWPAGSARREVAYLRLIAGVACAAPPLGVVCPGSRLPLMLFRRLAKCINSSNTKVAQEAAFLVQADFILMVYLAPDRRLMDLVTNALCANREHWSADVRNASDQTFDLMLDFL 1192
BLAST of mRNA_Ecto-sp6_S_contig98.18792.1 vs. uniprot
Match: A0A836CPM9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPM9_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.390e-39 Identity = 91/162 (56.17%), Postives = 115/162 (70.99%), Query Frame = 1
Query: 1141 SVFKDKLPSLTPRK--------APPATPRLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDVDDXXXXXMEGDEDEV-DESWIKTGINLTLFNSQAVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLPTLRALA 1599
+VF LPSLTP+ + A P LSRDSIVHAIF++LFG+R+VR GPRE YGG WD+ DD D V DESWIK+ ++++LF+S+A+ FA S GADLL +YVD++AV RLV LR +DPRVPSPRL I++AV+E+C HLRLP LRA A
Sbjct: 187 AVFGGTLPSLTPKTKTGHKRIGSAAAAPPLSRDSIVHAIFEALFGRRQVRRGPRESYGGAWDESDDDGDDPAADAPDAVVDESWIKSSMDVSLFSSKALQFAVSSVRGADLLSRYVDADAVSRLVDALRRDDPRVPSPRLAILRAVHEHCRHLRLPMLRAAA 348
BLAST of mRNA_Ecto-sp6_S_contig98.18792.1 vs. uniprot
Match: K3WXG7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXG7_GLOUD) HSP 1 Score: 82.4 bits (202), Expect = 3.400e-12 Identity = 56/170 (32.94%), Postives = 94/170 (55.29%), Query Frame = 1
Query: 3082 SLCNLYASHGAPAAGAEAAASADAPERLQPLALAGSTLCQLWPPSSALLLRRLLGTWPAGSARKEVAYLRLIAGVACAAPPLGVVC--PGSRLPLMLFRRLAKCINSSNTKVAQEAAFLVQADFILMVYLAPDRRLMDLVTNALCANR-EHWSADVRNASDQTFDLMLDF 3582
SL +L+ +H +AG++ E L ++ AG + + P + LL+RLL WP+ +EV +R++A V ++PPL + P + L + +F RLA+C+ S +T+VAQEA F+++ +LA + ++T A AN HW+ VR+ S+ FD LD+
Sbjct: 550 SLISLWRAHWLDSAGSD-------DEEL--ISCAGQFVAYM-PDVTVQLLQRLLANWPSKYPSQEVVAIRMVARVIMSSPPLHTMMNGPSANLHVKVFTRLARCVQSPHTQVAQEALAFTGCQFVMVHFLARYDDIYRVITEAFHANTVHHWNEAVRSTSEGHFDRALDY 709
BLAST of mRNA_Ecto-sp6_S_contig98.18792.1 vs. uniprot
Match: A0A2D4BM86_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM86_PYTIN) HSP 1 Score: 81.3 bits (199), Expect = 7.350e-12 Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 1
Query: 3226 LLRRLLGTWPAGSARKEVAYLRLIAGVACAAPPLGVVCPGSRLPLMLFRRLAKCINSSNTKVAQEAAFLVQADFILMVYLAPDRRLMDLVTNALCANR-EHWSADVRNASDQTFDLMLDF 3582
LLRRLL WP +E+ +R+IA V +PPL + LP+ +F RLAKCI S +T+VAQEA F ++ +L + +++ A N HW+ +R S+ FD LD+
Sbjct: 553 LLRRLLRCWPTRFPTQEIVAIRMIARVIMTSPPLHSIDGAEELPIQIFTRLAKCITSPHTQVAQEALAFTGCQFAMVHFLGEYEDIYKVISEAFHQNATSHWNEVIRTTSEGHFDRALDY 672
BLAST of mRNA_Ecto-sp6_S_contig98.18792.1 vs. uniprot
Match: A0A812UKS3_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UKS3_SYMMI) HSP 1 Score: 59.3 bits (142), Expect = 2.490e-5 Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 1345 DEVDESWIKTGINLTLFNSQAVDFACRSTAGAD-------LLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLPTLRALAHASHDHLMRTRELEDWAARVGVDIGEAAAAAVAD 1701
D VDESW ++ L +++A+ +A + AD LL +Y+ + + L+ L FED RV SP + ++KAV NCA LR L S+ L+R + +A +D AA++ +AD
Sbjct: 17 DPVDESWFNKLVSTCLLSTKALQYALQKNIPADTSLPPNELLSEYLQQSFLTSLLDQLPFEDERVSSPIVSVLKAVCRNCACLRQFLADGLKQVSYLRLLRCKSSSRFAVHFEIDP-NAASSIIAD 141
BLAST of mRNA_Ecto-sp6_S_contig98.18792.1 vs. uniprot
Match: M4BW79_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW79_HYAAE) HSP 1 Score: 59.3 bits (142), Expect = 4.220e-5 Identity = 48/143 (33.57%), Postives = 70/143 (48.95%), Query Frame = 1
Query: 1207 SRDSIVHAIFQSLFGKRKV--RSGPRERYGGDWDDVDDXXXXXMEGDEDEVDESWIKTGINLTLFNSQ-------AVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLPTLRALAHAS 1608
SRD ++ IF +LF +R R PR+ D+ D DE +E +K G+ LF SQ ++ A A AD L + + LV LRFED RV S RL I++A++++C R+ +RALA A+
Sbjct: 243 SRDDVIDTIFTALFCRRDEGRRRRPRQALSAFGDEGTDT---------DEPNEELVKQGLATALFKSQLQLHAPSSLSTAASPAAAADSL---LTPTFLHALVNALRFEDFRVASVRLDILRAIHKSCPTKRVHLVRALADAT 373
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 1987.6 |
| Seed ortholog evalue | 0.0 |
| Seed eggNOG ortholog | 2880.D8LEM5 |
| Model size | 3588 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| EggNOG free text desc. | Protein phosphatase 2A regulatory B subunit (B56 family) |
| EggNOG OGs | 28KUT@1,2QWGD@2759 |
| Ec32 ortholog description | Armadillo-type fold |
| Ec32 ortholog | Ec-23_002450.1 |
| Cds size | 3588 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1682350606.4376569-CDS-Ecto-sp6_S_contig98:509750..509855 | 1682350606.4376569-CDS-Ecto-sp6_S_contig98:509750..509855 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig98 509751..509855 + |
| 1682350606.4494698-CDS-Ecto-sp6_S_contig98:510858..511955 | 1682350606.4494698-CDS-Ecto-sp6_S_contig98:510858..511955 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig98 510859..511955 + |
| 1682350606.4591992-CDS-Ecto-sp6_S_contig98:512751..512973 | 1682350606.4591992-CDS-Ecto-sp6_S_contig98:512751..512973 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig98 512752..512973 + |
| 1682350606.468609-CDS-Ecto-sp6_S_contig98:513505..513626 | 1682350606.468609-CDS-Ecto-sp6_S_contig98:513505..513626 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig98 513506..513626 + |
| 1682350606.4783087-CDS-Ecto-sp6_S_contig98:514163..514656 | 1682350606.4783087-CDS-Ecto-sp6_S_contig98:514163..514656 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig98 514164..514656 + |
| 1682350606.487596-CDS-Ecto-sp6_S_contig98:514863..516233 | 1682350606.487596-CDS-Ecto-sp6_S_contig98:514863..516233 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig98 514864..516233 + |
| 1682350606.501619-CDS-Ecto-sp6_S_contig98:516845..517025 | 1682350606.501619-CDS-Ecto-sp6_S_contig98:516845..517025 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig98 516846..517025 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig98.18792.1 >prot_Ecto-sp6_S_contig98.18792.1 ID=prot_Ecto-sp6_S_contig98.18792.1|Name=mRNA_Ecto-sp6_S_contig98.18792.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1196bp
MPPTLAEDGQQQRKNSRKIKRLRDASCMRTRETAQDRWGRQRGGRKARWD KWDRQPSAFKSRLRSGNYAAAAAGGVGLGLGGGVVDEDAILDAAEEAFAF VDAATMKAAAAATAANAVLGSEGTSSDEGVGGGAGAEGDSDAATGVPACS VAVVDGGGVTGGGDVPPEAVAGDGAHTPSPTRRALQRQEEPPPSTTTPEP AATAAAAVLDAGGCTDDAVALSPAPATTATAVSTPSSARSIANGVSGSGG SGGSGGGISGSRSKTAGSGGRRSSLRSPGGLSRAGSKGSGVGGGLGSGSY RGSPPPLHRRLSSPAGVGSGKKGQRQRQAGGSTAVGAGARGLGSAKKKKQ ASRSDAGRQGRAEEEEVAAATPPPPPSLFESVFKDKLPSLTPRKAPPATP RLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDVDDDDDDEMEGDEDE VDESWIKTGINLTLFNSQAVDFACRSTAGADLLHQYVDSNAVFRLVTDLR FEDPRVPSPRLMIIKAVYENCAHLRLPTLRALAHASHDHLMRTRELEDWA ARVGVDIGEAAAAAVADGISGRSGAGGGAGGGRARVTGRDQSQTLGELLL FVLQTFPRFFLGMVPIDEAGGQQQGAWHHGDAGATTSGDGSGYGCVEDCG VAALAAEGCADVGGVDVHAGVCGGNTSSSGFMSPSQAWGSNGPGIGSPSS AEITENRRAAGDQEDGPAAAAAADGGDQCKSGCDGCDDHDGASFGEEGGL VGSPGGGGAGAGGGPTARSAASSGGDPAPASERCALAWPSLASGSPSPAT GQRQNQEGVGNKQEPPWSPAWATAGVRSIEDVPLEEGAGLAVNRGSCGDG VWGQGMASKDLAWESEAGLGEEVGGDLRTATDGVAGAARALRFTAQEEDV GGDPEVTGDAGNRHASGRECSRESPVASAGAALAGDPFESGAGRLGLDEW PTAQEAKSSTPEKRSAVEPFERMDGASVSGSRGDATGGQEAGTQQPLPSA TGCAAAGGGGLALELDLPAVALKEATRSLCNLYASHGAPAAGAEAAASAD APERLQPLALAGSTLCQLWPPSSALLLRRLLGTWPAGSARKEVAYLRLIA GVACAAPPLGVVCPGSRLPLMLFRRLAKCINSSNTKVAQEAAFLVQADFI LMVYLAPDRRLMDLVTNALCANREHWSADVRNASDQTFDLMLDFL* back to topmRNA from alignment at Ecto-sp6_S_contig98:509751..517025+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig98.18792.1 ID=mRNA_Ecto-sp6_S_contig98.18792.1|Name=mRNA_Ecto-sp6_S_contig98.18792.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7275bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:509751..517025+ (Ectocarpus species6 EcLAC_371) ATGCCCCCCACGCTGGCGGAGGATGGTCAGCAGCAGCGCAAGAACTCTCG
CAAAATCAAACGTTTGCGGGATGCATCCTGCATGAGGACACGGGAGACAG
CGCAGGTGAGTGTATAAATGTGTGTGTACGCGTGTCGACACATGGGCGAC
GAACCAACCGATTTCCAATGCTCGAATTGGCATTGCTGGTCGTGACTGAA
CGCTGTGGCGCACGTAGCACGCACGTTGTGTGCCACGCCTCTCCGCGCGC
TTCCGTATGACTTTGGCTTGTCTCCGGAAACCTTTGGGGCCTTGTATGCC
GCGAAGAATGATCGTGCGCGGAGTATCGTGCTGCTGCGTTGGACGAAGTA
AACTGATTCAGGATGTTTGGCGTTGGTCGTTTCCCTCAACCATGGTATGC
ATGGCCTTGACTACAGTACAAATCACTGCTGCAACTCATGCAGCGTCCCC
CACCCTCCCCTAGTCTTCAGAAAGTCCCTCATGTTGCCATCCTCGCACTC
CTTACGTCGTGTTGCGATTTTTCTTGGTTGTTGCTGTGGGTTGGTTGCCC
TTTTTCAAACAAAGCCGTGTTATAATTTCCCGATACGGACGCGTGTGAGC
GAGCTAACATCGGGAGCTCATCAAACAGGCGAGCACCTTTCGTCCCGCTG
GCCCCAGTCGAATCCACCTACAACAATCGCCCAGCACATGCACATCTCTC
GCCAGAGCTGCAAATACCGACCGCGAGAGCGGCTCGTCTCTGTTGGGCGT
TCACAACATTCGCTGTGCTTTGTACGACACCGTAACCGGGTGTGAGTTCA
AATCAGCGGCGTTCATGTTTGGCTGGCGCTCCTGTCGGAAGAATGTCCTA
CAGTAGTGTAGATGCCCGAGAAAATACACGCCGATTGTACCGGTGACCGG
CTTGGCGGAGTAATCGGCCCTGGCGTTCGCCCAACCCGCTTTCCCAATTT
GTGCCCATTTCGCTAAAACCGTGCCGGCCGTTTTTTTTGTTTCCACTACG
GCGGTAATGTCGCTCACCACAAAGCGTTGCTCTGCTTAATGCTCAACCAT
TCCCCGGCGCAATGTGCACGTCTCTTCGTGCTTTGTTTCCCATCTCTCGT
CTCCGCAGGACCGTTGGGGGCGGCAGCGCGGTGGGAGGAAGGCGCGATGG
GACAAGTGGGACAGGCAGCCCTCCGCCTTCAAGAGCCGCCTGCGGTCAGG
AAATTACGCCGCCGCTGCTGCCGGCGGCGTCGGCCTCGGCCTCGGCGGCG
GGGTTGTTGACGAGGACGCTATCCTCGACGCCGCAGAGGAGGCGTTCGCC
TTCGTTGACGCCGCCACAATGAAGGCGGCTGCGGCTGCCACCGCCGCTAA
CGCTGTCCTTGGCTCTGAAGGAACCTCCAGCGATGAGGGCGTCGGTGGGG
GTGCTGGTGCCGAGGGAGACTCGGATGCTGCCACCGGTGTCCCGGCTTGC
TCCGTCGCTGTCGTGGACGGTGGGGGTGTCACCGGCGGGGGTGACGTCCC
CCCTGAAGCCGTCGCTGGAGACGGCGCGCACACGCCGTCCCCGACGAGAC
GAGCGCTGCAGCGGCAAGAGGAGCCACCGCCGAGCACGACGACGCCGGAA
CCGGCGGCGACGGCGGCGGCGGCCGTCCTTGACGCGGGTGGATGCACCGA
CGACGCCGTTGCGTTGTCACCGGCGCCGGCAACCACGGCAACAGCCGTAT
CAACACCCTCTTCGGCCCGTAGTATTGCTAATGGTGTGAGCGGCAGCGGC
GGCAGCGGCGGCAGCGGCGGCGGTATTAGTGGTAGTAGGTCGAAGACCGC
CGGCAGCGGGGGCCGCCGGTCATCTCTGAGATCGCCTGGCGGTCTTTCTC
GCGCCGGGTCTAAGGGTAGCGGCGTCGGCGGCGGGCTTGGAAGCGGGAGC
TATCGCGGGAGCCCTCCTCCTCTCCACCGTAGGCTTAGCTCGCCGGCAGG
GGTTGGCAGCGGCAAGAAGGGCCAGAGACAACGTCAGGCAGGGGGGTCGA
CGGCTGTGGGAGCGGGGGCTCGAGGGTTGGGAAGCGCCAAGAAGAAAAAG
CAGGCGTCGCGGAGCGATGCGGGGCGGCAGGGGCGCGCGGAAGAGGAGGA
GGTAGCCGCGGCAACCCCGCCTCCCCCCCCGAGCCTGTTCGAGAGCGTGT
TCAAGGACAAGTTACCAAGCCTGACGCCGAGAAAAGCACCTCCGGCCACG
CCGCGGTACGTGTTTCATGTGTTTTTGGTCGACGGGGGGGGGGGTACTCT
ATGTTTTGCGTGCCATAGCGGTTAGACCAATGACCACTCGTCCTCGAGGG
GACGGAGCATTGTTCCCACAGGACCGATCACCGATGGCCAATCGTTCCTT
CCTGCTCTGCCAAACGTGGCTAAAAAATGTCGTCCCTATTCTATCTATCC
TATTGATATCACTTCCCGCCTTTTCAACCCACTTCCTATGCCCCACTACC
GCTACAGTCCTCTCTCGACTACTCCATGCCTTGAAGGTTTTTGGCAGGGG
GAGGGGGGGGTCCGGAACACACGAGGGTTTGGACTGGTTTGCCAGCGAGA
GATTCGGACGTCTGATTTTTTTTCTGGTAAATGTTGGTTCTCGATGATGG
AATGAACCTCCAGGGTCAAGGTACCCTTTCGTGTGTTCACGCAATTCTGG
GATTTTTTTCGGGGGGGGTGCTGAAATTGTTGGTTCAGCAATGGCTTCAA
GGTCTCTTTTTTTATGTTTCCCCGGTTCGCGCGCCTCCGCGCTCACAGTA
CGCTCCCAAAACCCCTAGCGTACGCGTTACAGAGACTGTCCCTGAGGGCT
TTCGACACCCGAACTAGCACGTCCTCGCCCCCCCCTCATGTTCACCAACG
TCTTTTGGCGTAACGAACAAAAGGGCTCGAAGTTTTCATCACCAGTTACG
CCCAGCCGCTAACACACACAGACCCCCCCCCCCGCCTCTCAAAATCACGC
CGCTCTTCAATTTTTCATCCTCAATCCGCGTCGATGTTGATCTTCCGACA
GGCTCAGCAGGGATTCGATCGTTCACGCCATCTTTCAGTCCCTCTTCGGT
AAGCGCAAGGTGCGAAGCGGCCCCCGCGAGCGCTACGGTGGGGACTGGGA
CGACGTCGACGACGACGACGATGACGAGATGGAGGGCGACGAGGACGAGG
TGGACGAGTCGTGGATCAAGACCGGCATTAACCTCACCCTATTCAACTCG
CAGGCTGTAGACTTCGCGTGCAGGTCAGTATAGATGGCAGCGGGAGAAAA
GGTGGTTGTGGTTGTAGAGACATGGTATTTACGCTCGTAGTAGTCGCGAA
GTGTAGAGTTTAAGCGTAGCGGGGTGACTGTGAAGACATCGTGTTTATGT
GTACATGGGTCGCATGTGTAAAGTTCAAGCGCACATGTAGCGGGGTTCTG
ACGCGCCAAGGATGAATCAAAGAAGAGCCTAGAGCTAGCCTCGCTGGGCC
AGATCGATTTATTCTTGTTAAAATCTTTCGGGAGTCTACCAAACAACCAC
GAACGAGGAGAACGTCTAGGTGTCTGGCCGAGCCCTTCAATCCACCGTCA
GACGACAGCGTAGCCCGCAGGGTCCGACACTGCAAGTGGTCCCGCGAAGA
CCCAGCTGAGATCGGCACCCTGCTGCGGTTTTTCCTCGGCCCTAACCGAT
CTTGACTTGTCTTCGTAGACTGGCTCTCTTGTTCTGTGAGGTCGTGTTGC
ATGGACCGTGCCGTGCCCGGCCCCTCAACTTGCGATGCCTCGTGATTGGT
GCCAGGAGCACGGCCGGGGCTGACCTACTGCACCAGTACGTGGACAGCAA
CGCCGTGTTCCGCCTGGTGACTGACCTCCGCTTCGAAGACCCGAGAGTTC
CTAGCCCGCGCCTGATGATCATCAAGGTTAGTTATCGACTTGGCGGAGTT
TTGATGAAGTACATATGTAGTTTTTTTCGCGAAGGTTTCCCCCCCGGCGT
GCTCTGTCCCTCCTTTGTAGGGATTCGAGGTCAATGGTCTGACGACTTCG
GTACACACGGCAATGCGTACATCCCGCGATCTCTGTTGTGCGGCGGTTAA
TTTAAAAACGCAAGACGAAAAAGAGTGCATAGAGTGCCCATTTCTATCGC
CAAGATGACCATGGACCATGATAGGAAAATGGGATTCTGTCTTGTACGCG
TTTGCCTCTTTACCCTCTAGAATCTAGCCTGTTCCCCATTCCCTAGAAAG
CGGTCCTTAAATCTCTCTCGCAAGAATTGCCGCTTCATTGTAATTCTAGC
ACGATTTTTCCCAGCATGTGTGTACTGGCCAGTCGTCACAACATGAGCAG
CGAAACAACATGATGCACGCATACATCACCTGCTTACATTTGCCTAGGTT
GGATGCGTCCATTACTTTGACCCCCGGCCCCCGCCGTCCTTGCGCTTTAT
CCCGACTGCTCAGGCTGTGTACGAAAACTGCGCGCACTTGCGGCTGCCCA
CCCTCCGCGCTTTGGCGCACGCCTCTCACGACCATCTCATGAGAACCCGC
GAGCTTGAGGATTGGGCCGCGAGGGTGGGCGTCGATATTGGGGAGGCTGC
CGCGGCCGCGGTGGCCGACGGGATTTCCGGAAGAAGCGGTGCCGGGGGCG
GGGCAGGGGGGGGCAGGGCTCGTGTGACCGGTCGGGACCAGTCGCAGACG
CTGGGCGAGCTACTGCTCTTCGTCCTCCAAACGTTCCCGAGATTTTTCCT
GGGAATGGTCCCCATCGACGAGGCAGGAGGGCAGCAGCAGGGGGCTTGGC
ACCACGGCGACGCCGGAGCTACCACTAGCGGGGATGGCAGTGGGTACGGG
TGCGTAGAAGATTGTGGTGTTGCCGCCCTGGCGGCAGAAGGGTGTGCCGA
CGTCGGCGGCGTGGACGTCCACGCCGGTGTGTGCGGGGGAAATACTTCTT
CCTCGGGTGAGAGCGCGGGAGAGGAGCCGCAGCTGCAGACGACCATTGTC
GTCACAGGCGACAACAGCAATAGTGGTGCTTTGGACCCTCCGTTCGACGC
ATCTTCGCTAGATGCGGCGACGGCAGCGGCGGGCGAGTGCTGTTCGCCGA
CGCCAACACCAAACCAGCCACCGCAACCGCACCCACCACCACCACCACCA
CCGCCGGTGGCAGGATTTATGTCACCTTCCCAAGCCTGGGGCAGCAACGG
TCCTGGCATCGGTAGCCCCAGCAGCGCTGAGATAACAGAAAACAGACGCG
CCGCCGGCGATCAAGAGGACGGCCCCGCCGCCGCAGCAGCAGCAGACGGC
GGTGACCAATGTAAGAGCGGCTGCGATGGTTGCGATGACCACGATGGTGC
AAGCTTTGGAGAAGAGGGAGGGTTGGTCGGGTCGCCAGGCGGGGGAGGGG
CGGGAGCGGGAGGCGGCCCCACCGCCCGGAGTGCCGCCAGCTCCGGTGGA
GACCCGGCGCCGGCTTCCGAACGGTGCGCGCTGGCGTGGCCCAGCTTGGC
GTCGGGCTCGCCCTCACCCGCCACCGGACAGCGCCAAAACCAGGAGGGCG
TCGGGAACAAGCAGGAGCCCCCATGGTCCCCGGCATGGGCAACCGCTGGG
GTACGGAGCATTGAAGATGTTCCACTGGAGGAGGGGGCGGGATTGGCGGT
GAACCGCGGCAGCTGCGGCGACGGTGTTTGGGGCCAGGGAATGGCGAGCA
AGGACCTGGCTTGGGAATCGGAGGCGGGGCTGGGGGAGGAGGTCGGCGGC
GACTTGAGGACGGCGACGGACGGGGTTGCCGGCGCCGCCCGCGCCTTGCG
CTTCACGGCGCAGGAGGAGGACGTCGGCGGTGACCCGGAAGTGACCGGGG
ACGCGGGCAACCGGCACGCGTCAGGGCGGGAGTGTTCGCGAGAATCCCCC
GTTGCCTCTGCTGGCGCAGCACTGGCGGGGGATCCCTTCGAGTCGGGGGC
GGGAAGGCTGGGGCTTGACGAATGGCCCACTGCCCAGGAGGCGAAGTCGA
GCACGCCGGAGAAGAGATCGGCGGTGGAACCCTTCGAGCGAATGGACGGC
GCGTCGGTGTCCGGGTCACGGGGAGACGCCACGGGAGGCCAAGAGGCAGG
CACGCAGCAGCCACTGCCTTCGGCGACCGGCTGCGCCGCCGCAGGCGGCG
GTGGGCTTGCGCTTGAGCTCGACCTGCCCGCCGTGGCGCTGAAGGAAGCC
ACCCGCTCGCTCTGCAACCTGTACGCCAGCCACGGCGCGCCGGCCGCGGG
GGCGGAAGCGGCAGCGTCCGCGGACGCCCCAGAGCGGCTGCAGCCGCTGG
CTCTCGCCGGGTCCACCCTGTGCCAGCTCTGGCCGCCGTCATCGGCGCTG
CTGCTCCGGCGCCTGCTCGGCACGTGGCCCGCCGGGAGCGCGAGGAAAGA
GGTTGCGTACCTGAGGCTGATCGCCGGCGTGGCGTGCGCCGCGCCGCCGC
TCGGGGTGGTGTGCCCTGGCTCGCGCCTCCCGCTCATGCTGTTCCGCCGG
CTTGCCAAGTGCATCAACAGCTCGAACACTAAGGTGAGGAGTTTTGTTGT
TGGGATGTTTGTCGTGAGGGGGCATGGTTTTGCCGTCATCCATGACCGTG
GATGATGTTGCCGGTCGCCCCCGTCAGGTGGGAAAGATGCAGAAATGATG
TGGATGGTGGGGGCCCGGCGCGGGTGGAGTGGGGTACGGAGAGCACGAGC
AACTGCTGTTGCATAGAGCGGCACGTTTACCTGCGAGTTTGTTGACGTTA
TTTGCGACGGTCTGGATGTTTGATGAAGGCCATCTTGTCGCCGTGCCTCT
TTTTGCCCGTTGTTGTCACGCGAGCGATCACCTGTTGTTCCCGCGTTCCG
TTCCTCAAGCGCTTCCTTGGCGATCGACCCCCTCGCTGTTCTGACTCCAC
GAGTTTCGACGAAGCTATTTCACGGCTTTTCGTAGGATCTTTTCGACGAC
TTGGCATCGACCACCCGCTGTTCGGCTTCCCTCCAACGTGTGCGCTGGTG
CTGGTTTTCGTGTTACAGTCACACGTTTCGGTTGGGAATGTCCTCCTTCC
GTTAATCGGCAACATGCCCACGCACGGAGCAATTCGAAACACCGCCCCAC
AACTATCGACTTCCCCCAAAACGCTTGTCCTGTATTTTTTTTCAGGTGGC
GCAGGAGGCGGCGTTCCTTGTCCAGGCGGACTTCATCCTGATGGTATACC
TCGCTCCGGACCGGCGTCTCATGGACCTCGTGACGAACGCGCTGTGCGCG
AACCGCGAGCACTGGAGCGCGGACGTGCGCAACGCGTCCGACCAGACGTT
TGACCTCATGCTTGACTTCCTCTGA back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig98:509751..517025+ >mRNA_Ecto-sp6_S_contig98.18792.1 ID=mRNA_Ecto-sp6_S_contig98.18792.1|Name=mRNA_Ecto-sp6_S_contig98.18792.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=3588bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:509751..517025+ (Ectocarpus species6 EcLAC_371) ATGCCCCCCACGCTGGCGGAGGATGGTCAGCAGCAGCGCAAGAACTCTCG CAAAATCAAACGTTTGCGGGATGCATCCTGCATGAGGACACGGGAGACAG CGCAGGACCGTTGGGGGCGGCAGCGCGGTGGGAGGAAGGCGCGATGGGAC AAGTGGGACAGGCAGCCCTCCGCCTTCAAGAGCCGCCTGCGGTCAGGAAA TTACGCCGCCGCTGCTGCCGGCGGCGTCGGCCTCGGCCTCGGCGGCGGGG TTGTTGACGAGGACGCTATCCTCGACGCCGCAGAGGAGGCGTTCGCCTTC GTTGACGCCGCCACAATGAAGGCGGCTGCGGCTGCCACCGCCGCTAACGC TGTCCTTGGCTCTGAAGGAACCTCCAGCGATGAGGGCGTCGGTGGGGGTG CTGGTGCCGAGGGAGACTCGGATGCTGCCACCGGTGTCCCGGCTTGCTCC GTCGCTGTCGTGGACGGTGGGGGTGTCACCGGCGGGGGTGACGTCCCCCC TGAAGCCGTCGCTGGAGACGGCGCGCACACGCCGTCCCCGACGAGACGAG CGCTGCAGCGGCAAGAGGAGCCACCGCCGAGCACGACGACGCCGGAACCG GCGGCGACGGCGGCGGCGGCCGTCCTTGACGCGGGTGGATGCACCGACGA CGCCGTTGCGTTGTCACCGGCGCCGGCAACCACGGCAACAGCCGTATCAA CACCCTCTTCGGCCCGTAGTATTGCTAATGGTGTGAGCGGCAGCGGCGGC AGCGGCGGCAGCGGCGGCGGTATTAGTGGTAGTAGGTCGAAGACCGCCGG CAGCGGGGGCCGCCGGTCATCTCTGAGATCGCCTGGCGGTCTTTCTCGCG CCGGGTCTAAGGGTAGCGGCGTCGGCGGCGGGCTTGGAAGCGGGAGCTAT CGCGGGAGCCCTCCTCCTCTCCACCGTAGGCTTAGCTCGCCGGCAGGGGT TGGCAGCGGCAAGAAGGGCCAGAGACAACGTCAGGCAGGGGGGTCGACGG CTGTGGGAGCGGGGGCTCGAGGGTTGGGAAGCGCCAAGAAGAAAAAGCAG GCGTCGCGGAGCGATGCGGGGCGGCAGGGGCGCGCGGAAGAGGAGGAGGT AGCCGCGGCAACCCCGCCTCCCCCCCCGAGCCTGTTCGAGAGCGTGTTCA AGGACAAGTTACCAAGCCTGACGCCGAGAAAAGCACCTCCGGCCACGCCG CGGCTCAGCAGGGATTCGATCGTTCACGCCATCTTTCAGTCCCTCTTCGG TAAGCGCAAGGTGCGAAGCGGCCCCCGCGAGCGCTACGGTGGGGACTGGG ACGACGTCGACGACGACGACGATGACGAGATGGAGGGCGACGAGGACGAG GTGGACGAGTCGTGGATCAAGACCGGCATTAACCTCACCCTATTCAACTC GCAGGCTGTAGACTTCGCGTGCAGGAGCACGGCCGGGGCTGACCTACTGC ACCAGTACGTGGACAGCAACGCCGTGTTCCGCCTGGTGACTGACCTCCGC TTCGAAGACCCGAGAGTTCCTAGCCCGCGCCTGATGATCATCAAGGCTGT GTACGAAAACTGCGCGCACTTGCGGCTGCCCACCCTCCGCGCTTTGGCGC ACGCCTCTCACGACCATCTCATGAGAACCCGCGAGCTTGAGGATTGGGCC GCGAGGGTGGGCGTCGATATTGGGGAGGCTGCCGCGGCCGCGGTGGCCGA CGGGATTTCCGGAAGAAGCGGTGCCGGGGGCGGGGCAGGGGGGGGCAGGG CTCGTGTGACCGGTCGGGACCAGTCGCAGACGCTGGGCGAGCTACTGCTC TTCGTCCTCCAAACGTTCCCGAGATTTTTCCTGGGAATGGTCCCCATCGA CGAGGCAGGAGGGCAGCAGCAGGGGGCTTGGCACCACGGCGACGCCGGAG CTACCACTAGCGGGGATGGCAGTGGGTACGGGTGCGTAGAAGATTGTGGT GTTGCCGCCCTGGCGGCAGAAGGGTGTGCCGACGTCGGCGGCGTGGACGT CCACGCCGGTGTGTGCGGGGGAAATACTTCTTCCTCGGGATTTATGTCAC CTTCCCAAGCCTGGGGCAGCAACGGTCCTGGCATCGGTAGCCCCAGCAGC GCTGAGATAACAGAAAACAGACGCGCCGCCGGCGATCAAGAGGACGGCCC CGCCGCCGCAGCAGCAGCAGACGGCGGTGACCAATGTAAGAGCGGCTGCG ATGGTTGCGATGACCACGATGGTGCAAGCTTTGGAGAAGAGGGAGGGTTG GTCGGGTCGCCAGGCGGGGGAGGGGCGGGAGCGGGAGGCGGCCCCACCGC CCGGAGTGCCGCCAGCTCCGGTGGAGACCCGGCGCCGGCTTCCGAACGGT GCGCGCTGGCGTGGCCCAGCTTGGCGTCGGGCTCGCCCTCACCCGCCACC GGACAGCGCCAAAACCAGGAGGGCGTCGGGAACAAGCAGGAGCCCCCATG GTCCCCGGCATGGGCAACCGCTGGGGTACGGAGCATTGAAGATGTTCCAC TGGAGGAGGGGGCGGGATTGGCGGTGAACCGCGGCAGCTGCGGCGACGGT GTTTGGGGCCAGGGAATGGCGAGCAAGGACCTGGCTTGGGAATCGGAGGC GGGGCTGGGGGAGGAGGTCGGCGGCGACTTGAGGACGGCGACGGACGGGG TTGCCGGCGCCGCCCGCGCCTTGCGCTTCACGGCGCAGGAGGAGGACGTC GGCGGTGACCCGGAAGTGACCGGGGACGCGGGCAACCGGCACGCGTCAGG GCGGGAGTGTTCGCGAGAATCCCCCGTTGCCTCTGCTGGCGCAGCACTGG CGGGGGATCCCTTCGAGTCGGGGGCGGGAAGGCTGGGGCTTGACGAATGG CCCACTGCCCAGGAGGCGAAGTCGAGCACGCCGGAGAAGAGATCGGCGGT GGAACCCTTCGAGCGAATGGACGGCGCGTCGGTGTCCGGGTCACGGGGAG ACGCCACGGGAGGCCAAGAGGCAGGCACGCAGCAGCCACTGCCTTCGGCG ACCGGCTGCGCCGCCGCAGGCGGCGGTGGGCTTGCGCTTGAGCTCGACCT GCCCGCCGTGGCGCTGAAGGAAGCCACCCGCTCGCTCTGCAACCTGTACG CCAGCCACGGCGCGCCGGCCGCGGGGGCGGAAGCGGCAGCGTCCGCGGAC GCCCCAGAGCGGCTGCAGCCGCTGGCTCTCGCCGGGTCCACCCTGTGCCA GCTCTGGCCGCCGTCATCGGCGCTGCTGCTCCGGCGCCTGCTCGGCACGT GGCCCGCCGGGAGCGCGAGGAAAGAGGTTGCGTACCTGAGGCTGATCGCC GGCGTGGCGTGCGCCGCGCCGCCGCTCGGGGTGGTGTGCCCTGGCTCGCG CCTCCCGCTCATGCTGTTCCGCCGGCTTGCCAAGTGCATCAACAGCTCGA ACACTAAGGTGGCGCAGGAGGCGGCGTTCCTTGTCCAGGCGGACTTCATC CTGATGGTATACCTCGCTCCGGACCGGCGTCTCATGGACCTCGTGACGAA CGCGCTGTGCGCGAACCGCGAGCACTGGAGCGCGGACGTGCGCAACGCGT CCGACCAGACGTTTGACCTCATGCTTGACTTCCTCTGA back to top
|