mRNA_Ecto-sp6_S_contig97.18715.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: D8LLA7_ECTSI (RNA polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA7_ECTSI) HSP 1 Score: 980 bits (2534), Expect = 0.000e+0 Identity = 550/557 (98.74%), Postives = 551/557 (98.92%), Query Frame = 1
Query: 1 MSSRSRLRPRPRSWCSGSARFLLSVAAIVRSGLHIATDAFTLPSGAGHPPRSRSASERLLLLEVEAETATPARNPQSRPTSDAWCARSVAGNALRGACPGHDRLPRGRRHRGCSSRLGAVGTAAPSEVVVGVGGAAGPAVLGASARVRKASKQEVRAVTRGLNSITSFAAYGSRDTRGRMTIAEEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLRRRPGRYARQQLTAAARGRVSGRVGGAASVVGRRGRVGRRGGVLAREFG 1671
MSSRSRLRPRPRSWCSGSARFLLSVAAIVRSGLHIATDAFTLPSGAGHPPRSRSASERLLLLEVEAETATPARNPQSRPTSDAWCARSVAGNALRGACPGHDRLPRGRRHRGCSSRLGAVGTAAPSEVVVGVGGAAGPAVLGASARVRKAS QEVRAVTRGLNSITSFAAYGSRDT GRMTIAEEILLVEEVK+LARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAE MRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXX KAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLRRRPGRYARQQLTAAARGRVSG VGGAASVVGRRGRVGRRGGVLAREFG
Sbjct: 1 MSSRSRLRPRPRSWCSGSARFLLSVAAIVRSGLHIATDAFTLPSGAGHPPRSRSASERLLLLEVEAETATPARNPQSRPTSDAWCARSVAGNALRGACPGHDRLPRGRRHRGCSSRLGAVGTAAPSEVVVGVGGAAGPAVLGASARVRKASNQEVRAVTRGLNSITSFAAYGSRDTAGRMTIAEEILLVEEVKILARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAERMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXX--KAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLRRRPGRYARQQLTAAARGRVSGGVGGAASVVGRRGRVGRRGGVLAREFG 555
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: A0A6H5KNQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ9_9PHAE) HSP 1 Score: 691 bits (1783), Expect = 6.160e-239 Identity = 371/395 (93.92%), Postives = 378/395 (95.70%), Query Frame = 1
Query: 1 MSSRSRLRPRPRSWCSGSARFLLSVAAIVRSGLHIATDAFTLPSGAGHPPRSRSASERLLLLEVEAETATPARNPQSRPTSDAWCARSVAGNALRGACPGHDRLPRGRRHRGCSSRLGAVGTAAPSEVVVGVGGAAGPAVLGASARVRKASKQEVRAVTRGLNSITSFAAYGSRDTRGRMTIAEEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGG 1185
MSSRSRLRPRPRSW GSARFLLSVAAIVRSGLHIATDAFTLPSGAG PPR+ SASERL LLEVEAETA PARNPQSRPTSDAWCARSVAGNALR ACPGHDR P GRRHRG SSRLGAVGTA PSEVVVG+GGAA PA+LGASAR RKASKQEVRA+TRGLNSITSFAAYGSR+T GRMT+AEEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQM+ASARAQERIV ANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAE M VDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGG
Sbjct: 1 MSSRSRLRPRPRSWFVGSARFLLSVAAIVRSGLHIATDAFTLPSGAGRPPRNGSASERL-LLEVEAETAPPARNPQSRPTSDAWCARSVAGNALRCACPGHDRQPGGRRHRGFSSRLGAVGTA-PSEVVVGLGGAARPALLGASARARKASKQEVRAMTRGLNSITSFAAYGSRETPGRMTMAEEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMMASARAQERIVEANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAERMEVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGG 393
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: A0A6U5F3I3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5F3I3_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.630e-40 Identity = 117/357 (32.77%), Postives = 179/357 (50.14%), Query Frame = 1
Query: 460 EVRAVTRGLNSITSFAAYGSRDTRGRMTIAEEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRL-MNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLR 1527
+ R V G + I+S + +T AEE L E+ ++ RE E +G R P+ EEWA S N++ +L Q+ S A+ R+V NVGL+V +A+++ RG +D++QEG+L ++ AAE F+P+ G++F TYA WW+R R+TR + + +R+IRLP++VH T L ELGR+PT EIA M + +++V +L ++ SL+ P + V DR L G +A PE E L ++L ++ L+ ER V+ +R+GL + T EVA+R T+ +VR VE RALNKLR
Sbjct: 128 KARIVVGGESRISSTKFNSFQGRTALLTRAEEATLSNEISKFVSLIRIREDFERAVG-RVPSDEEWAESTNLNIFDLLQQIKRSRDARARLVNGNVGLVVSIAKKYKN----RGLAFADLVQEGNLGLMEAAERFEPKKGFKFCTYASWWIRQRMTRSIAEYSRVIRLPEHVHMSLGIMQKTTKELTVELGRQPTKLEIASRMNIPLKKVEKLSVSSKIVLSLEI---PVSGKVDDRRTLKDG--------------------------------------IASDSPTPEDHTEASLLRAELIAVMEELAPTERDVLMMRFGLDDGTSKTIDEVASRMKVTREKVRSVEARALNKLR 438
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: A0A7S1B782_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B782_9STRA) HSP 1 Score: 159 bits (402), Expect = 9.270e-38 Identity = 113/331 (34.14%), Postives = 178/331 (53.78%), Query Frame = 1
Query: 538 MTIAEEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRLMNCP-DAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLR 1527
+T EE+LL V+LL ++ + RE+LE EL R PT EWAA++ + T++L Q+ S RA+ ++ +N+ L++ +A+R+ T D+ QEGSL +++A E FDP G+RFSTYA WW++ V R + Q+R IRLP ++H+ T + L +LGR+PT +EIAE + V+++ L + S + R+G +G XXXXXXXX + + PE++A + L + +D+LL LS E+ V+++R+GL T E+ R T+ R+R +E RAL+KLR
Sbjct: 187 LTAQEEVLLARHVQLLLKWEEVRERLEIELA-RPPTYAEWAAAVGVDTKKLKRQIRRSQRAKAAMIESNLRLVISIAKRYTSRTNTLSV--QDLCQEGSLGLVKAVEKFDPERGFRFSTYATWWIKQSVMRAIADQSRTIRLPVHIHDQLNTVRKHKRELTGKLGRQPTTEEIAEAAGITVDKLQFLWKSSRETMSFEQ---------EIRVGGAGXXXXXXXXXTVILS-----------------------DSITDKEHMPEEKAALSLMKDDIDRLLGTLSVREQDVIRMRFGLDDGKAKTLEEIGKRFRVTRERIRQIEARALHKLR 482
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: A0A6U3P0N0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3P0N0_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.660e-37 Identity = 114/346 (32.95%), Postives = 171/346 (49.42%), Query Frame = 1
Query: 538 MTIAEEILLVEEVKLLARYLKTREQLEAEL---GGR---EPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRH--------HPATMARGTITS--DVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLR 1527
+T EE+ L ++ L ++ R+ L AEL GG EP +WA + ++S +L + A+ R+V ANVGLI+ +ARRH H GTI + D++QEG+L ++ AAE FDP G+RFSTYA WW+R R+ + + +R+IRLP +VH+ RT + T + KE+GR P+ E+A + + +E++T F D + R+ + L A A +R+A PE+ AEV ++ ++ L ER V+ R+GL SP T + A R G ++ RVR VE RALNKLR
Sbjct: 159 LTREEEVELTSAIRTLKSVVRIRDDLGAELSIDGGATMGEPLEADWAEACSLSVAQLRRTLHFGQEARTRLVSANVGLIMNIARRHYYALKRSVHSGKGGIGTILTLQDMVQEGNLGLMEAAERFDPARGFRFSTYAAWWIRQRILQSIADYSRVIRLPVHVHSTLRTINRTRKEMEKEIGRPPSMPELAHKLEMPLEKLT--------FYADTS--------RNVLSLESSLNND-----------------------AVDDARTLGDRIASDAPTPEEDAEVDSLRQEIRAVIDGLGNKERDVLVSRFGLDDGSPKTVEQTAKRLGISRDRVRNVEARALNKLR 465
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: D8LNI6_ECTSI (Chloroplast RNA-polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI6_ECTSI) HSP 1 Score: 161 bits (408), Expect = 1.890e-37 Identity = 108/326 (33.13%), Postives = 171/326 (52.45%), Query Frame = 1
Query: 550 EEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLR 1527
EEI+L +++ Y TR+ L+ + G EP+ EEWA +L + EEL ++ +++A+ ++ AN+ L+V +A+R+ ++ D+IQEG+ +++AAE FDP G++FSTYA WW++ + R + Q+RIIRLP +VH+F + + G+ PT DE+AEH+ V R+ + A +AP R + + S G K G G V+ P+++A+ + + K+ +LL LS E+ VVK R+GLGGA P T EV T+ RVR +E RAL+KLR
Sbjct: 68 EEIVLGRQIQKGVSYENTRDHLQL-MRGYEPSEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLS----FQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDDELAEHLEVSAVRIQYYRDAAQATLSMEAP----RNIASKTSTSPGK-------------------------KVEMGQG-----VSGPEKTPDKQAQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLR 354
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: A0A6H5K3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H4_9PHAE) HSP 1 Score: 162 bits (410), Expect = 2.210e-37 Identity = 108/326 (33.13%), Postives = 171/326 (52.45%), Query Frame = 1
Query: 550 EEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLR 1527
EEI+L +++ Y TR+ L+ + G EPT EEWA +L + EEL ++ +++A+ ++ AN+ L+V +A+R+ ++ D+IQEG+ +++AAE FDP G++FSTYA WW++ + R + Q+RIIRLP +VH+F + + G+ PT +E+AEH+ V R+ + A +AP R + + S G K G G V+ P+++A+ + + K+ +LL LS E+ VVK R+GLGGA P T EV T+ RVR +E RAL+KLR
Sbjct: 198 EEIVLGRQIQKGVSYENTRDHLQL-MRGYEPTEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLS----FQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDEELAEHLEVSAVRIQYYRDAAQATLSMEAP----RTIASKTSTSPGK-------------------------KVEMGQG-----VSGPEKTPDKQAQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLR 484
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA) HSP 1 Score: 157 bits (396), Expect = 5.110e-37 Identity = 101/327 (30.89%), Postives = 167/327 (51.07%), Query Frame = 1
Query: 550 EEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRLMNCP-DAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLR 1527
EE+LL +V+ + + R+ L+ +LG R PT EEWA+S+ + +EL +++ A++ ++ +N+ L++ +A+R+ RG +D+IQEGSL ++RA E FDP G++FSTY+ WW++ + R + Q+R IRLP ++H+ T L LGR PT +E+AE M + +E++ L C A S+D + R + S G G + + P Q E + + ++KL+ LS E+ V+++R+GL P T E+ T+ RVR +E RAL+KLR
Sbjct: 177 EEVLLARKVQAMIGWEDVRDGLKDQLG-RPPTLEEWASSVGMQPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQK----RGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQSRTIRLPVHIHDLLNTMKKQTRELHVSLGRNPTNEELAERMNLPIEKLRFLQECSRPAVSMD-----AQRRAMTKKSSSAGKG----------------------------GEVQLGDSIKDDGPCPTQVTEANMLKEDIEKLVCTLSPREQDVIRMRFGLDADKPKTLEEIGNVFSVTRERVRQIEARALHKLR 465
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: Q8S9C9_CYAPA (RNA polymerase sigma factor n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=Q8S9C9_CYAPA) HSP 1 Score: 153 bits (386), Expect = 3.280e-36 Identity = 112/333 (33.63%), Postives = 164/333 (49.25%), Query Frame = 1
Query: 550 EEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNIS-TEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTIT-SDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLF-ESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLRRRPG 1539
+EI L + ++ + K +E ++ + G EPT EEWA + +S EEL H + A++R+V AN+ +V +A+++H RGT++ D+IQEG++ ++RA E FDPR+GYRF+TYA WW+R +TR + +R IRLP + H AL + LGR+PT EIAEH+ +D R+ + + A + P A G R E P RAE L ES L LSE E +V+++R+GL P T +V G T+ RVR +E +AL KLRR PG
Sbjct: 131 DEIELAKRIETFRKLEKVKEHMKWKTGV-EPTDEEWARAAALSDAEELRHMVRVGTLARDRLVRANLRWVVAVAKKYHKQ---RGTMSMQDLIQEGNIGLIRAVEKFDPRMGYRFTTYATWWIRQAITRSIQNSSREIRLPAHRHEKINRIKRATVALSRSLGRQPTEAEIAEHVGLDPSRMRKFVESAAAVATVSLDVP---------------------------------INESDNQSATIGDFIRSENEG-----PADRAERELMRESVARTLAKALSEREYMVLRMRFGLDDGEPKTLNQVGETLGVTRERVRQIEMKALRKLRR-PG 420
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Match: B8C0J0_THAPS (Plastid RNA polymerase sigma factor (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0J0_THAPS) HSP 1 Score: 148 bits (374), Expect = 1.140e-35 Identity = 109/331 (32.93%), Postives = 155/331 (46.83%), Query Frame = 1
Query: 538 MTIAEEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAEHMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLRR 1530
+T EE L +VK + + E L E+G R P+ EWAA+ S M+ + A++R+V N+ L+V +ARR+H G D++QEGSL + RAAE FDP+ G++FSTYA WW++ V R + +R IRLP +VHN L +ELGR PT +E+A M + +E+ +++ R R+ I L +A G V PEQ + GL + ++ +L L EDER V+ LRYG+ T VA+ TK VR E RAL KLRR
Sbjct: 5 LTAKEEYSLGMKVKFMVKCEAVHEGLSVEMG-RSPSIAEWAAAC--SPRLFREMMLTAKEAKQRMVQCNMRLVVSIARRYHGV----GVNVQDLVQEGSLGLARAAEKFDPKKGFKFSTYASWWIQQAVFRSIAYHSRTIRLPVHVHNLLNKVRRARQVLQQELGRTPTNEEMAVEMDMTIEKYNKMI----------------RTTRNAISLE-------------RPKYKNNPKDLGHESEALVGDMVDSSAVIFDEKTPEQNVDHGLLHNDIEYMLGKLGEDERSVLCLRYGINDGITRTVTLVASEMRQTKSWVRSQECRALRKLRR 299 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig97.18715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig97.18715.1 >prot_Ecto-sp6_S_contig97.18715.1 ID=prot_Ecto-sp6_S_contig97.18715.1|Name=mRNA_Ecto-sp6_S_contig97.18715.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=558bp MSSRSRLRPRPRSWCSGSARFLLSVAAIVRSGLHIATDAFTLPSGAGHPPback to top mRNA from alignment at Ecto-sp6_S_contig97:406565..413014+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig97.18715.1 ID=mRNA_Ecto-sp6_S_contig97.18715.1|Name=mRNA_Ecto-sp6_S_contig97.18715.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6450bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:406565..413014+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig97:406565..413014+ >mRNA_Ecto-sp6_S_contig97.18715.1 ID=mRNA_Ecto-sp6_S_contig97.18715.1|Name=mRNA_Ecto-sp6_S_contig97.18715.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1674bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:406565..413014+ (Ectocarpus species6 EcLAC_371)back to top |