mRNA_Ecto-sp6_S_contig94.18531.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig94.18531.1
Unique NamemRNA_Ecto-sp6_S_contig94.18531.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: D7G2W3_ECTSI (Glutathione peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W3_ECTSI)

HSP 1 Score: 533 bits (1374), Expect = 4.950e-187
Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 2
Query:  317 MQNAAGSQDAGSRRSSXXXXXXXXXASTRLEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAGPEGAAPAASPAATETKPSLRELGFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 1186
            MQNAAGSQDAGSRRSSXXXXXXXXXASTRLEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAG EGAAPAASPAATETKPSLRELGFEVPYTGKSVPLNKFLG+RATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEAD+KAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN
Sbjct:    1 MQNAAGSQDAGSRRSSXXXXXXXXXASTRLEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAGAEGAAPAASPAATETKPSLRELGFEVPYTGKSVPLNKFLGSRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADVKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 290          
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A6H5JKB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB2_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 3.670e-92
Identity = 179/206 (86.89%), Postives = 186/206 (90.29%), Query Frame = 2
Query:  104 MAHGSTMGASVVVLGLACFRQASAFVVSVRSPAATTAPSPAAAAGLLRINSVGEHRLHRKTSAASGVYRLSMQNAAGSQDAGSRRSSXXXXXXXXXASTRLEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAGPEGAAPAASPAATETKPSLRELGFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQ--MPG 715
            MAHGSTM ASVVVLGLACFRQASAFVVSVRSPAAT AP+PA AAGL+RIN VGEHRLHR+T  ASGVYRLSMQ AAGSQDAG     XXXXXXXXXASTRLEFG+GLGAAAAAIV+GGTSARGALAED  GDAATAVVATAG EGAA AASPAATET PSLRELGFEVPYTGK VPLNKFLG+RATLVVNGKLDDPEALHQ  +PG
Sbjct:    1 MAHGSTMAASVVVLGLACFRQASAFVVSVRSPAAT-APAPATAAGLIRINIVGEHRLHRRTRTASGVYRLSMQKAAGSQDAGXXXXXXXXXXXXXXASTRLEFGAGLGAAAAAIVMGGTSARGALAEDANGDAATAVVATAGAEGAAHAASPAATETTPSLRELGFEVPYTGKLVPLNKFLGSRATLVVNGKLDDPEALHQGNLPG 205          
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A835Z1R8_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R8_9STRA)

HSP 1 Score: 280 bits (717), Expect = 4.580e-89
Identity = 129/194 (66.49%), Postives = 155/194 (79.90%), Query Frame = 2
Query:  605 VPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 1186
            +PY GK +P+ K LG +ATLV+NGKLDDP A+ QMP I  +A++Y ++GL+V++ PTDQG FEADEDRV++IKFYQFYGFGQYP AVV DK+DIVGNT HP Y+YLCR+LKNPNGIARITLN+EKFLL  DG+ +RRYPR+L     E DI A + G PLP   R Y  SW+KA  EA +SEYAFKLGLNYYNN
Sbjct:    1 MPYNGKQIPVGKLLGPKATLVINGKLDDPAAMQQMPDIVNMANKYGREGLHVIVVPTDQGYFEADEDRVVKIKFYQFYGFGQYPVAVVTDKVDIVGNTAHPLYKYLCRSLKNPNGIARITLNFEKFLLGADGRPLRRYPRQLALGLVEDDIAAAVRGAPLPPPGRPYATSWVKAQAEAERSEYAFKLGLNYYNN 194          
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A7S2UVM6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVM6_9STRA)

HSP 1 Score: 264 bits (675), Expect = 3.130e-81
Identity = 127/210 (60.48%), Postives = 156/210 (74.29%), Query Frame = 2
Query:  560 AATETKPSLRELGFEVPYTGKSVPLNKFLGN-RATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 1186
            AA E KP  R   FE PY    VPL KFL N +A LVVN KLDDP +L QMP + +LA+ YSKDGL +L+FPTDQGTFE D+D  +RIK YQFYGFGQYP A V DKIDIVG + HP Y++LC +L NP G+ RITLNYEKFLL+ DG  VRRYPRK+E AD+E D++AV+ G+ LP E+  ++ +W+ A +EA  SEYAF+  LNYY+N
Sbjct:   94 AAAEEKPVKRITDFEAPYNRNPVPLTKFLKNAKAILVVNSKLDDPVSLQQMPPLVELATRYSKDGLRILVFPTDQGTFEPDDDETVRIKNYQFYGFGQYPVATVMDKIDIVGTSAHPIYKFLCSSLPNPYGVKRITLNYEKFLLNADGVPVRRYPRKMELADYEKDVQAVLKGEQLPDESLAFRKAWVAAKKEAAMSEYAFRKNLNYYDN 303          
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A7S3XXI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXI6_HETAK)

HSP 1 Score: 263 bits (673), Expect = 1.100e-80
Identity = 123/196 (62.76%), Postives = 155/196 (79.08%), Query Frame = 2
Query:  599 FEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 1186
            FEVPY GK VPL+KFLG +ATLVVN K+DDP +L QMPG+  L     + GL +  FPTDQG FE DE+ VIRIK YQ YG+GQYP +++FDKID+VGNTIHPFY++LC +LKNP GI R+TLNYEKFLLD +G+VVRRYPRK  A + E D+K ++AG+PLP E+  +K +W++A +EA  S+YAFK GLNYY+N
Sbjct:  114 FEVPYNGKQVPLSKFLG-QATLVVNIKIDDPVSLQQMPGLVALTQTLGRKGLRIWCFPTDQGYFEPDENDVIRIKNYQIYGYGQYPISMLFDKIDVVGNTIHPFYKFLCSSLKNPYGIRRVTLNYEKFLLDGEGRVVRRYPRKYPATEMEKDLKPLLAGEPLPEESPAFKKAWVEAKREAATSQYAFKKGLNYYDN 308          
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: W7TC45_9STRA (Glutathione peroxidase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC45_9STRA)

HSP 1 Score: 250 bits (638), Expect = 3.650e-75
Identity = 128/217 (58.99%), Postives = 154/217 (70.97%), Query Frame = 2
Query:  533 EGAAPA-ASPAATETKPSLRELGFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYY 1180
            E A PA  SP AT   P      + VPY G  VPL  F G +A +V N K DDPE+L Q+PG+T L  +YSK GL V +F T+QGTFE DEDRVIRIK+YQ YGFGQYP ++VFDKIDIVG    PFY++LC+ L+NPN IARITLN+EKFLLD +G+ VRRYPR+  A D E D+KAV+AG+PLP  +     +W  A  EA +SEYAFK GLNYY
Sbjct:  118 ESAQPAPVSPPATAPGPLKTAYDYAVPYDGVRVPLGNFRG-KAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYY 333          
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A7S2CSS9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CSS9_9STRA)

HSP 1 Score: 216 bits (549), Expect = 4.390e-63
Identity = 104/194 (53.61%), Postives = 135/194 (69.59%), Query Frame = 2
Query:  599 FEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYY 1180
            F+VPY  K VP +KF G +A +V N K DDPEAL Q P +  L  +Y  DGL +L FPTDQG +E +   ++R +  Q +GFGQ+P AVVFDK+DI+G+T HP Y YL RAL NPNG + +TLN+EKFL+D  GK VRRYPRK      E DI+A++AGDPLP E+  +  +W  A++EA KSEY+F+ G N Y
Sbjct:   50 FDVPYKRKPVPWSKFRG-KAMIVCNVKNDDPEALKQYPALAYLNKKYYTDGLRILAFPTDQGWYEPEVSEIVRQRALQAFGFGQFPYAVVFDKVDILGSTSHPLYNYLMRALPNPNGKSSVTLNFEKFLVDGSGKPVRRYPRKYSGFQMERDIEALLAGDPLPEESDAFLTAWKDAEREAIKSEYSFRSGYNVY 242          
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A7S0E1J0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1J0_9CRYP)

HSP 1 Score: 201 bits (511), Expect = 2.640e-57
Identity = 98/195 (50.26%), Postives = 130/195 (66.67%), Query Frame = 2
Query:  605 VPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKA--VVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYN 1183
            +P  GK   L+K +G++AT+V+N KLDDPE + Q+P +  L  +Y+  GLN + FPTDQG +E D+   +RIK  Q YG     K   VV DK DIVG   HP YRY+   L NPN I RITLNYEKFLLD +GKV+RRYPR   A   E D+KAV+AG PLP  +  ++ +W +AD+EAT+S Y+F+   N+Y+
Sbjct:   39 IPVNGKQKSLSKLIGSKATIVMNIKLDDPETVTQIPALKTLVLQYADQGLNAICFPTDQGDYEPDDSATVRIKVAQQYGMKSSVKGPIVVTDKTDIVGKFTHPLYRYMTTNLPNPNNITRITLNYEKFLLDANGKVLRRYPRLWSAERMEKDVKAVLAGQPLPPMDPQWQFAWKEADKEATRSIYSFRKHYNFYD 233          
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A6U4LLP0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4LLP0_HEMAN)

HSP 1 Score: 204 bits (518), Expect = 2.970e-57
Identity = 101/217 (46.54%), Postives = 138/217 (63.59%), Query Frame = 2
Query:  575 KPSLRELGFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKA--VVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN*RKLL*RYWGG 1219
            +P       ++PY G+  PL K LG  AT+V+N KLDDPE   Q+P +T L  +YS+ GLN +  PTDQG +E D+   +RIK  Q +G     K   VV DK DIVG   HP Y+Y+     NPN + RITLNYEKFLLD +G V+RRYPR+  +   E D+KAVI+GDPL   ++ ++L+W +AD+EAT+S Y+F+   NYY+  +K   + W G
Sbjct:  116 EPEEGPTSLDIPYNGRRKPLRKMLGETATIVMNIKLDDPETNRQIPALTTLVEKYSQQGLNAICVPTDQGDYEPDDSTTVRIKVKQQFGMSSALKGPIVVTDKADIVGKFAHPLYKYMTTHAPNPNNVTRITLNYEKFLLDGEGNVLRRYPRQWGSDLIEKDVKAVISGDPLEPVSKKWQLAWSEADKEATRSMYSFRKHYNYYD--QKYAGKDWAG 330          
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A0G4FMZ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMZ4_VITBC)

HSP 1 Score: 201 bits (512), Expect = 9.030e-57
Identity = 99/198 (50.00%), Postives = 135/198 (68.18%), Query Frame = 2
Query:  596 GFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNP---NGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYY 1180
            G E+P   KS+P+ KFLG RATLVVN KLDDPE+  Q+  +  L  +Y K GL V++FPT QG  E D D  +RI+ YQ +GFGQYP+AV FDK+D++G   HP Y YL R L+NP        I+LNYEKFLLD DG  VRRYPR+ +  + E D++A++ G  L A +++++L+WLKA++E  K  YA++   NY+
Sbjct:  126 GLEIPLRKKSIPIEKFLGRRATLVVNIKLDDPES-RQIGELKYLVDKYWKQGLTVMMFPTLQGWAEPDTDDTLRIRVYQTFGFGQYPQAVCFDKVDVIGPQAHPLYTYLGRQLRNPIAGKSWENISLNYEKFLLDGDGVPVRRYPRQWDPLEIEYDLRALLDGRQLGAPSKEFQLAWLKAERERKKDTYAYRENYNYF 322          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2W3_ECTSI4.950e-18798.97Glutathione peroxidase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JKB2_9PHAE3.670e-9286.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1R8_9STRA4.580e-8966.49Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S2UVM6_9STRA3.130e-8160.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XXI6_HETAK1.100e-8062.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TC45_9STRA3.650e-7558.99Glutathione peroxidase n=3 Tax=Monodopsidaceae Tax... [more]
A0A7S2CSS9_9STRA4.390e-6353.61Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0E1J0_9CRYP2.640e-5750.26Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A6U4LLP0_HEMAN2.970e-5746.54Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A0G4FMZ4_VITBC9.030e-5750.00Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig94contigEcto-sp6_S_contig94:398044..402461 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score537.7
Seed ortholog evalue4.1e-150
Seed eggNOG ortholog2880.D7G2W3
Model size1558
KEGG rclassRC00011,RC00982
KEGG koko:K00432
KEGG ReactionR00274,R07034,R07035
KEGG Pathwayko00480,ko00590,ko04918,map00480,map00590,map04918
Hectar predicted targeting categorychloroplast
Exons5
EggNOG free text desc.glutathione peroxidase activity
EggNOG OGsCOG0386@1,KOG1651@2759
EC1.11.1.9
Cds size1086
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig94.18531.1prot_Ecto-sp6_S_contig94.18531.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig94 398147..402092 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350577.5601888-UTR-Ecto-sp6_S_contig94:398043..3981461682350577.5601888-UTR-Ecto-sp6_S_contig94:398043..398146Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig94 398044..398146 +
1682350577.626827-UTR-Ecto-sp6_S_contig94:402092..4024611682350577.626827-UTR-Ecto-sp6_S_contig94:402092..402461Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig94 402093..402461 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350577.5746388-CDS-Ecto-sp6_S_contig94:398146..3987491682350577.5746388-CDS-Ecto-sp6_S_contig94:398146..398749Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 398147..398749 +
1682350577.5852363-CDS-Ecto-sp6_S_contig94:400126..4002011682350577.5852363-CDS-Ecto-sp6_S_contig94:400126..400201Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 400127..400201 +
1682350577.5960436-CDS-Ecto-sp6_S_contig94:400767..4009011682350577.5960436-CDS-Ecto-sp6_S_contig94:400767..400901Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 400768..400901 +
1682350577.6065385-CDS-Ecto-sp6_S_contig94:401255..4014001682350577.6065385-CDS-Ecto-sp6_S_contig94:401255..401400Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 401256..401400 +
1682350577.616808-CDS-Ecto-sp6_S_contig94:401963..4020921682350577.616808-CDS-Ecto-sp6_S_contig94:401963..402092Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 401964..402092 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig94.18531.1

>prot_Ecto-sp6_S_contig94.18531.1 ID=prot_Ecto-sp6_S_contig94.18531.1|Name=mRNA_Ecto-sp6_S_contig94.18531.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=362bp
MAHGSTMGASVVVLGLACFRQASAFVVSVRSPAATTAPSPAAAAGLLRIN
SVGEHRLHRKTSAASGVYRLSMQNAAGSQDAGSRRSSSDSSSSSSGASTR
LEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAGPEGAAPAA
SPAATETKPSLRELGFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALH
QMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQY
PKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGK
VVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEY
AFKLGLNYYNN*
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mRNA from alignment at Ecto-sp6_S_contig94:398044..402461+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig94.18531.1 ID=mRNA_Ecto-sp6_S_contig94.18531.1|Name=mRNA_Ecto-sp6_S_contig94.18531.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4418bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:398044..402461+ (Ectocarpus species6 EcLAC_371)
GAGGACAGCTCACACACAGCAACAGCAGAGGGAGAGGAGCTGGCAAAAGA GAGGAGGTGAATTCACCTCCGGTTCATTCACGCGTGGATCGGTGCTACAG ATAATGGCTCACGGGTCTACGATGGGGGCATCGGTGGTCGTCCTAGGTCT CGCATGTTTCCGACAAGCGTCCGCGTTTGTCGTATCCGTGCGGTCGCCTG CTGCGACCACCGCACCTTCTCCTGCTGCAGCAGCAGGACTTCTTCGTATC AACAGCGTTGGAGAGCACCGATTGCATCGAAAAACAAGCGCCGCCTCTGG CGTCTACCGTCTCTCGATGCAAAACGCGGCGGGGTCACAGGATGCGGGCA GCAGACGTAGCAGCAGCGACAGCAGCAGCAGCAGCAGCGGAGCATCCACC AGATTAGAGTTCGGGTCGGGACTGGGAGCGGCGGCGGCGGCCATCGTGAT CGGCGGTACCAGCGCAAGAGGTGCCCTCGCGGAAGACACCACTGGGGATG CCGCCACAGCAGTGGTCGCAACGGCGGGACCTGAAGGGGCTGCCCCTGCG GCTTCGCCGGCGGCGACGGAGACCAAACCGTCGTTGCGCGAGCTGGGGTT CGAGGTGCCCTACACCGGCAAGTCGGTCCCGCTGAACAAGTTCCTGGGGA ACCGGGCCACCCTGGTGGTCAACGGCAAGCTTGACGATCCGGAAGCGCTA CACCAGGTGATTGAACTAGAGCGTAGGCCACCGCTGTGTACACCCGCGGG GCGGTGTAAGCATCGCACCTTGGGAGGCCGAACAAGAAACGCCGGCTGGG CAATTTGCCCGGTGGAGTTGACATGACATAAGATACCGCACCCCCAGGCC CGAATTCAAAAACTCGGCTGCACCATGGCGAAGAGGATGCATACACGAAG CGATGCGTTTGCGGAGAGCTCCCGATGAGGAGGCTTCGACGCCGGCGTTT TCAGCGCTGCAAATATAATGTTTCTGCTATGGACAAATCGAGCTTTGACA ATCGGCCTAGGGGGTGTGGTATCTTACGTCATACCATTACCTTGCGGTAC ACATATTTATTTGTTGCCGGTCGTGGAGTGGAACATCCACCTCACCTCCC GGTGCTGTTCCTGGATATGTAGCGCACGGTGATAAGATCTGTGATGGGGG CTGTCACGGGCACATAAATTGTCCTGCTGTGTTGTGTGCCTGTCGTCTCC GCGGGCACAGAATTGGTCCAGCTTCGTTTTGTAATCAATATCTTGCTTGT GGCTACACCTTCCGTACGAAATAAGACTGCTGTTGTTGGGTGTTTGCCCT CTCCACCCCGCTGCTTTGCTTTTGGCCCCAAACAAGGAATGCGAAAACAC CAATCATCCGCCCACTCTATGCAACAGGAGTGTAATAGTTTCACCTCTGC AGAGTAGTATTGATCTTGCCGCTGCAGTCAGCAGCTCGATGTGTACAGCA GCGTTGTGCGATGAGCATTTCCCGTCGGACCGACAACGATATTGCCTCGC GCTCAAGAACGTTATGAAGGTTTACAACCCAAGATTGCCGCATGGGGTGT TGGAATGATGGAAGGGAATGTCAATGTCGCCCGATGCCGAATGGCGTCAA CTGTTTGTACCCATCCAATACCCAGCGTAACGGGGGATATGTTGCGCGGA CCATTCTACTCGTTTGTTTTGGATATATCTGCACGTGGTACCTAAAGTGT CGGATAGGTCAACGCGTGCTGGGTGAAAAATGCCCCGGGTTGTTGGCTAG GTTTACCAAACACAACTTCACAATACCGGTCATGTCGACGCAGCAGTTAC GGGTTTAGTGTCATCCTGGCTATTCTGCGGGGGAAACCGAATACGTTCCG CAGGATACAGGCAATGAACGCTTTTGATTCCGGTTGCTTGAACTGCCAGA ACGAGCGCTGGCGATGCCAGAAGCATGGCGCTTGCTCTTAGACGGAATGT ATTGTTGGGACCAATGAACCGCGAGCCACGGGTTGGATCCTAGGTGTACG GTACGGTGCCACGAAACGCGGGTTCTGATTGGATACTTGCCCGACTGCAA CGTTTGTTCCCCGGCGGTTGACGTACGTTGCAGATGCCTGGGATAACGAA GCTGGCATCGGAGTACTCCAAGGACGGGCTGAACGTGCTGCTGTTCCCGA CTGATCAGGTGAGTAGTCTCTGCCCCCGATGGGTTGCAGGCAGGGAAGGG GTCATGCCTGTGCATGTGGCATAGGCATAGTGGGTGTTGCTCTGCCGCGA TCCGGAGACCGCTGTTGCTTCATTTCGTGGCCGACGGTGTCGTATCAAAG ATAAGGCTAGGGAAGAAGCACGCAGGGGACCGGAGCGTTGGAAATGTTGG ATACGGCAATTCATCGCGATGGTGCGGCAGAGTTTGCGGAATCGGGAATT GCCCGTATCCGTAGCTCTTTAACTGGTGGTTCTGTTTGCTGTGACGTGCG ATACAGTATTCCACGCACACACTCTTTGGTTCACGTGGACTAGGGGATGG AGGGCAGCCACGGAAAGGAACGGCAAGGTATTGGTAGCAAACACCATGCA GCAAGAATCGTGGTAGCAGTGTTGAAGAAGAACCGAGAGTTGGCAATGTG TTTGGGGTGATGACAGCAGAGACATGCGTGGCCAATAAGAAGATGACGGC AAGACACGGACGTGCCCCCCCACAAACCCGGCGTTGCTTGCTTGTTTGCT TGCTTGTCGCTGCTGTTACCACAGGGGACTTTCGAGGCGGACGAGGATCG TGTGATCCGAATCAAGTTCTACCAGTTCTACGGTTTTGGTCAGTATCCGA AGGCCGTGGTGTTCGACAAGATCGATATCGTGGGCAACACCATCCACCCC TTCTACAGGTTAGGGGTAGAATCCTGATGGCGGTGTCCTAAGCGACGAGT GAAATGAAAAAATCTGTGCGTAAGCACAAGGCTGAGAACGCCGAAGAGTC AGAGATGGCAGCCAAGTGCCGCTGGACAGGCCTCTCAGCCGTGCCACGCG GTTTCAACGGCACTATGTATGTGTCAACGGCACTATGTGTAACGGGACCA CCTTGGCGAGGGTTTGATTATTCATCTATGTAATAGAGAAGAGGGTTTCT TCCCTATCCCTAACCCCACAGCGCACCCCCTACCAAACCCAAACATCTTG GCGAAGGCTGCTGGCAGGCACTGCATGTAACCGCCGGCCGGTTTTGATTG TGACGGCAACAGGTACCTCTGCCGGGCGCTGAAGAACCCCAACGGCATCG CGCGCATCACGCTTAACTACGAGAAGTTCCTGCTGGACCAAGACGGGAAG GTGGTGCGACGGTATCCACGCAAGCTCGAGGCCGCCGACTTCGAGGCGGA CATAAAGGTAAAGGTACACTTAGTCGGGTAGAGGTCACGTAACGGTACCG TTGGTCACGGTATCGGTATGCGTTTTGGCGTAAATGCATAATTAGTTACG TATGGTAGTCACAGAAATGTACAGTTATCCGCGTAAAGGTACAGTTATTC ACGTAAAAGGTACAGTTATTCACGTAAAAGGTACAGTTATTCACGTAAAA GGTACAGGTGGTGACGTCAAGGTGCGCAGTCAGTCACCAAATACCGTGAC AAAAGCAACGGCAGGATGAGCAACCGAGAAATACAGGAGTAACGCTCCAA AGATTGGCAGTCATTTAACTCCCTCGAAATATTGTCACTTTCCGTTCGCT TTTTGAGGAAGGAACGTGCAGACCAGTGACGGCCCAACCTGACGACCCAA ATTATGCATGCGCGGCGCGGTCATAATGTTCCGTGTTTCCCGCGATGAAG CCGAAGGACACGCAATTCCCCCAAGAGTCGCCGAGTGAACAGGCTGCATC GCGTGAATGCCCCCTCGTCCCCGTCCCCAAACGGCGTGTTTTGAAACACC CGCATCCTCTTATCGTTCAGGCGGTGATAGCGGGTGACCCGCTGCCGGCC GAGAACCGCGACTACAAGCTGTCGTGGCTCAAGGCAGACCAGGAGGCTAC GAAGTCCGAGTACGCGTTCAAGCTGGGCCTCAACTACTACAACAACTGAC GAAAGCTATTGTAGCGATACTGGGGTGGGGGTGGAAGTTGTTTTTCGGTC GGACAAGGGCGACAGCCTAGTACACGTTGAGCTACTAGGCTGCCCTCCAG GGAGAGCACAGCAGTGTCAACCAACGGAAACGCAAGATGAAAGAGGGTGG TGATGTTAGTGTATCATGGCTCCCCCTGTTTGAGGGAGACAGCTAGCTGA ATTAACCTCGCCAAAACACCAACCGGCCGCTAACAAAAACCGGCGCAAGA GCTGGCGGCAACCAACAGCTGGGCGTTTTCCACCCAGCTCGACCAGCCCG GCTGCGTGGCGTTTCCCCCAAGCCGGCTGCCATCTGTGACGTTTTCAAAG CTCCAACAGCCCACGCAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig94:398044..402461+

>mRNA_Ecto-sp6_S_contig94.18531.1 ID=mRNA_Ecto-sp6_S_contig94.18531.1|Name=mRNA_Ecto-sp6_S_contig94.18531.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1086bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:398044..402461+ (Ectocarpus species6 EcLAC_371)
ATGGCTCACGGGTCTACGATGGGGGCATCGGTGGTCGTCCTAGGTCTCGC
ATGTTTCCGACAAGCGTCCGCGTTTGTCGTATCCGTGCGGTCGCCTGCTG
CGACCACCGCACCTTCTCCTGCTGCAGCAGCAGGACTTCTTCGTATCAAC
AGCGTTGGAGAGCACCGATTGCATCGAAAAACAAGCGCCGCCTCTGGCGT
CTACCGTCTCTCGATGCAAAACGCGGCGGGGTCACAGGATGCGGGCAGCA
GACGTAGCAGCAGCGACAGCAGCAGCAGCAGCAGCGGAGCATCCACCAGA
TTAGAGTTCGGGTCGGGACTGGGAGCGGCGGCGGCGGCCATCGTGATCGG
CGGTACCAGCGCAAGAGGTGCCCTCGCGGAAGACACCACTGGGGATGCCG
CCACAGCAGTGGTCGCAACGGCGGGACCTGAAGGGGCTGCCCCTGCGGCT
TCGCCGGCGGCGACGGAGACCAAACCGTCGTTGCGCGAGCTGGGGTTCGA
GGTGCCCTACACCGGCAAGTCGGTCCCGCTGAACAAGTTCCTGGGGAACC
GGGCCACCCTGGTGGTCAACGGCAAGCTTGACGATCCGGAAGCGCTACAC
CAGATGCCTGGGATAACGAAGCTGGCATCGGAGTACTCCAAGGACGGGCT
GAACGTGCTGCTGTTCCCGACTGATCAGGGGACTTTCGAGGCGGACGAGG
ATCGTGTGATCCGAATCAAGTTCTACCAGTTCTACGGTTTTGGTCAGTAT
CCGAAGGCCGTGGTGTTCGACAAGATCGATATCGTGGGCAACACCATCCA
CCCCTTCTACAGGTACCTCTGCCGGGCGCTGAAGAACCCCAACGGCATCG
CGCGCATCACGCTTAACTACGAGAAGTTCCTGCTGGACCAAGACGGGAAG
GTGGTGCGACGGTATCCACGCAAGCTCGAGGCCGCCGACTTCGAGGCGGA
CATAAAGGCGGTGATAGCGGGTGACCCGCTGCCGGCCGAGAACCGCGACT
ACAAGCTGTCGTGGCTCAAGGCAGACCAGGAGGCTACGAAGTCCGAGTAC
GCGTTCAAGCTGGGCCTCAACTACTACAACAACTGA
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