mRNA_Ecto-sp6_S_contig94.18531.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: D7G2W3_ECTSI (Glutathione peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W3_ECTSI) HSP 1 Score: 533 bits (1374), Expect = 4.950e-187 Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 2
Query: 317 MQNAAGSQDAGSRRSSXXXXXXXXXASTRLEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAGPEGAAPAASPAATETKPSLRELGFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 1186
MQNAAGSQDAGSRRSSXXXXXXXXXASTRLEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAG EGAAPAASPAATETKPSLRELGFEVPYTGKSVPLNKFLG+RATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEAD+KAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN
Sbjct: 1 MQNAAGSQDAGSRRSSXXXXXXXXXASTRLEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAGAEGAAPAASPAATETKPSLRELGFEVPYTGKSVPLNKFLGSRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADVKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 290
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A6H5JKB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB2_9PHAE) HSP 1 Score: 289 bits (739), Expect = 3.670e-92 Identity = 179/206 (86.89%), Postives = 186/206 (90.29%), Query Frame = 2
Query: 104 MAHGSTMGASVVVLGLACFRQASAFVVSVRSPAATTAPSPAAAAGLLRINSVGEHRLHRKTSAASGVYRLSMQNAAGSQDAGSRRSSXXXXXXXXXASTRLEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAGPEGAAPAASPAATETKPSLRELGFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQ--MPG 715
MAHGSTM ASVVVLGLACFRQASAFVVSVRSPAAT AP+PA AAGL+RIN VGEHRLHR+T ASGVYRLSMQ AAGSQDAG XXXXXXXXXASTRLEFG+GLGAAAAAIV+GGTSARGALAED GDAATAVVATAG EGAA AASPAATET PSLRELGFEVPYTGK VPLNKFLG+RATLVVNGKLDDPEALHQ +PG
Sbjct: 1 MAHGSTMAASVVVLGLACFRQASAFVVSVRSPAAT-APAPATAAGLIRINIVGEHRLHRRTRTASGVYRLSMQKAAGSQDAGXXXXXXXXXXXXXXASTRLEFGAGLGAAAAAIVMGGTSARGALAEDANGDAATAVVATAGAEGAAHAASPAATETTPSLRELGFEVPYTGKLVPLNKFLGSRATLVVNGKLDDPEALHQGNLPG 205
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A835Z1R8_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R8_9STRA) HSP 1 Score: 280 bits (717), Expect = 4.580e-89 Identity = 129/194 (66.49%), Postives = 155/194 (79.90%), Query Frame = 2
Query: 605 VPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 1186
+PY GK +P+ K LG +ATLV+NGKLDDP A+ QMP I +A++Y ++GL+V++ PTDQG FEADEDRV++IKFYQFYGFGQYP AVV DK+DIVGNT HP Y+YLCR+LKNPNGIARITLN+EKFLL DG+ +RRYPR+L E DI A + G PLP R Y SW+KA EA +SEYAFKLGLNYYNN
Sbjct: 1 MPYNGKQIPVGKLLGPKATLVINGKLDDPAAMQQMPDIVNMANKYGREGLHVIVVPTDQGYFEADEDRVVKIKFYQFYGFGQYPVAVVTDKVDIVGNTAHPLYKYLCRSLKNPNGIARITLNFEKFLLGADGRPLRRYPRQLALGLVEDDIAAAVRGAPLPPPGRPYATSWVKAQAEAERSEYAFKLGLNYYNN 194
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A7S2UVM6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVM6_9STRA) HSP 1 Score: 264 bits (675), Expect = 3.130e-81 Identity = 127/210 (60.48%), Postives = 156/210 (74.29%), Query Frame = 2
Query: 560 AATETKPSLRELGFEVPYTGKSVPLNKFLGN-RATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 1186
AA E KP R FE PY VPL KFL N +A LVVN KLDDP +L QMP + +LA+ YSKDGL +L+FPTDQGTFE D+D +RIK YQFYGFGQYP A V DKIDIVG + HP Y++LC +L NP G+ RITLNYEKFLL+ DG VRRYPRK+E AD+E D++AV+ G+ LP E+ ++ +W+ A +EA SEYAF+ LNYY+N
Sbjct: 94 AAAEEKPVKRITDFEAPYNRNPVPLTKFLKNAKAILVVNSKLDDPVSLQQMPPLVELATRYSKDGLRILVFPTDQGTFEPDDDETVRIKNYQFYGFGQYPVATVMDKIDIVGTSAHPIYKFLCSSLPNPYGVKRITLNYEKFLLNADGVPVRRYPRKMELADYEKDVQAVLKGEQLPDESLAFRKAWVAAKKEAAMSEYAFRKNLNYYDN 303
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A7S3XXI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXI6_HETAK) HSP 1 Score: 263 bits (673), Expect = 1.100e-80 Identity = 123/196 (62.76%), Postives = 155/196 (79.08%), Query Frame = 2
Query: 599 FEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 1186
FEVPY GK VPL+KFLG +ATLVVN K+DDP +L QMPG+ L + GL + FPTDQG FE DE+ VIRIK YQ YG+GQYP +++FDKID+VGNTIHPFY++LC +LKNP GI R+TLNYEKFLLD +G+VVRRYPRK A + E D+K ++AG+PLP E+ +K +W++A +EA S+YAFK GLNYY+N
Sbjct: 114 FEVPYNGKQVPLSKFLG-QATLVVNIKIDDPVSLQQMPGLVALTQTLGRKGLRIWCFPTDQGYFEPDENDVIRIKNYQIYGYGQYPISMLFDKIDVVGNTIHPFYKFLCSSLKNPYGIRRVTLNYEKFLLDGEGRVVRRYPRKYPATEMEKDLKPLLAGEPLPEESPAFKKAWVEAKREAATSQYAFKKGLNYYDN 308
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: W7TC45_9STRA (Glutathione peroxidase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC45_9STRA) HSP 1 Score: 250 bits (638), Expect = 3.650e-75 Identity = 128/217 (58.99%), Postives = 154/217 (70.97%), Query Frame = 2
Query: 533 EGAAPA-ASPAATETKPSLRELGFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYY 1180
E A PA SP AT P + VPY G VPL F G +A +V N K DDPE+L Q+PG+T L +YSK GL V +F T+QGTFE DEDRVIRIK+YQ YGFGQYP ++VFDKIDIVG PFY++LC+ L+NPN IARITLN+EKFLLD +G+ VRRYPR+ A D E D+KAV+AG+PLP + +W A EA +SEYAFK GLNYY
Sbjct: 118 ESAQPAPVSPPATAPGPLKTAYDYAVPYDGVRVPLGNFRG-KAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYY 333
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A7S2CSS9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CSS9_9STRA) HSP 1 Score: 216 bits (549), Expect = 4.390e-63 Identity = 104/194 (53.61%), Postives = 135/194 (69.59%), Query Frame = 2
Query: 599 FEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYY 1180
F+VPY K VP +KF G +A +V N K DDPEAL Q P + L +Y DGL +L FPTDQG +E + ++R + Q +GFGQ+P AVVFDK+DI+G+T HP Y YL RAL NPNG + +TLN+EKFL+D GK VRRYPRK E DI+A++AGDPLP E+ + +W A++EA KSEY+F+ G N Y
Sbjct: 50 FDVPYKRKPVPWSKFRG-KAMIVCNVKNDDPEALKQYPALAYLNKKYYTDGLRILAFPTDQGWYEPEVSEIVRQRALQAFGFGQFPYAVVFDKVDILGSTSHPLYNYLMRALPNPNGKSSVTLNFEKFLVDGSGKPVRRYPRKYSGFQMERDIEALLAGDPLPEESDAFLTAWKDAEREAIKSEYSFRSGYNVY 242
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A7S0E1J0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1J0_9CRYP) HSP 1 Score: 201 bits (511), Expect = 2.640e-57 Identity = 98/195 (50.26%), Postives = 130/195 (66.67%), Query Frame = 2
Query: 605 VPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKA--VVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYN 1183
+P GK L+K +G++AT+V+N KLDDPE + Q+P + L +Y+ GLN + FPTDQG +E D+ +RIK Q YG K VV DK DIVG HP YRY+ L NPN I RITLNYEKFLLD +GKV+RRYPR A E D+KAV+AG PLP + ++ +W +AD+EAT+S Y+F+ N+Y+
Sbjct: 39 IPVNGKQKSLSKLIGSKATIVMNIKLDDPETVTQIPALKTLVLQYADQGLNAICFPTDQGDYEPDDSATVRIKVAQQYGMKSSVKGPIVVTDKTDIVGKFTHPLYRYMTTNLPNPNNITRITLNYEKFLLDANGKVLRRYPRLWSAERMEKDVKAVLAGQPLPPMDPQWQFAWKEADKEATRSIYSFRKHYNFYD 233
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A6U4LLP0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4LLP0_HEMAN) HSP 1 Score: 204 bits (518), Expect = 2.970e-57 Identity = 101/217 (46.54%), Postives = 138/217 (63.59%), Query Frame = 2
Query: 575 KPSLRELGFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKA--VVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN*RKLL*RYWGG 1219
+P ++PY G+ PL K LG AT+V+N KLDDPE Q+P +T L +YS+ GLN + PTDQG +E D+ +RIK Q +G K VV DK DIVG HP Y+Y+ NPN + RITLNYEKFLLD +G V+RRYPR+ + E D+KAVI+GDPL ++ ++L+W +AD+EAT+S Y+F+ NYY+ +K + W G
Sbjct: 116 EPEEGPTSLDIPYNGRRKPLRKMLGETATIVMNIKLDDPETNRQIPALTTLVEKYSQQGLNAICVPTDQGDYEPDDSTTVRIKVKQQFGMSSALKGPIVVTDKADIVGKFAHPLYKYMTTHAPNPNNVTRITLNYEKFLLDGEGNVLRRYPRQWGSDLIEKDVKAVISGDPLEPVSKKWQLAWSEADKEATRSMYSFRKHYNYYD--QKYAGKDWAG 330
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Match: A0A0G4FMZ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMZ4_VITBC) HSP 1 Score: 201 bits (512), Expect = 9.030e-57 Identity = 99/198 (50.00%), Postives = 135/198 (68.18%), Query Frame = 2
Query: 596 GFEVPYTGKSVPLNKFLGNRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNP---NGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADIKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYY 1180
G E+P KS+P+ KFLG RATLVVN KLDDPE+ Q+ + L +Y K GL V++FPT QG E D D +RI+ YQ +GFGQYP+AV FDK+D++G HP Y YL R L+NP I+LNYEKFLLD DG VRRYPR+ + + E D++A++ G L A +++++L+WLKA++E K YA++ NY+
Sbjct: 126 GLEIPLRKKSIPIEKFLGRRATLVVNIKLDDPES-RQIGELKYLVDKYWKQGLTVMMFPTLQGWAEPDTDDTLRIRVYQTFGFGQYPQAVCFDKVDVIGPQAHPLYTYLGRQLRNPIAGKSWENISLNYEKFLLDGDGVPVRRYPRQWDPLEIEYDLRALLDGRQLGAPSKEFQLAWLKAERERKKDTYAYRENYNYF 322 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig94.18531.1 >prot_Ecto-sp6_S_contig94.18531.1 ID=prot_Ecto-sp6_S_contig94.18531.1|Name=mRNA_Ecto-sp6_S_contig94.18531.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=362bp MAHGSTMGASVVVLGLACFRQASAFVVSVRSPAATTAPSPAAAAGLLRINback to top mRNA from alignment at Ecto-sp6_S_contig94:398044..402461+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig94.18531.1 ID=mRNA_Ecto-sp6_S_contig94.18531.1|Name=mRNA_Ecto-sp6_S_contig94.18531.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4418bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:398044..402461+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig94:398044..402461+ >mRNA_Ecto-sp6_S_contig94.18531.1 ID=mRNA_Ecto-sp6_S_contig94.18531.1|Name=mRNA_Ecto-sp6_S_contig94.18531.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1086bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:398044..402461+ (Ectocarpus species6 EcLAC_371)back to top |