mRNA_Ecto-sp6_S_contig93.18473.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: D7G9I0_ECTSI (C2H2 zinc finger, ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I0_ECTSI) HSP 1 Score: 889 bits (2297), Expect = 9.160e-314 Identity = 521/581 (89.67%), Postives = 526/581 (90.53%), Query Frame = 1
Query: 121 LVYHLTKKSGIQTRHLVVYNTGPAVGVDEVTLRRVFEAYGEVERVYCPNPAAARVLISFHE-------------------------------------VSSAARARAERNRPPEIEERVRVGVPGAAAASDVFAPTPGEPCPLLGRWLKVSFADVRVRHNGGXXXXXXXXXXXXXXXAPAVPSHLSGFKAFDALAAGGTASCDARPTPCPLCGRTCGGQRGLRMHLVGAHPLEVKDRDHFVQLLQRGSASLPPMKAPGTDLATKRNDHDGVGQATEEDGGAPAVGXXXXXKGRASAALPPGFAAARAGELGALKRLVEEEGWEPKIALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTSXXXXXXXXXXXXXXXXLETPRPVDTAAAVSFVGGGDGTLVSPGGERTFVSPDVAAAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGGAGGLDWAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVVPRRAWEKDEGGYTPEDVARLAGHVDLADWIAGAGVIPSTDETS 1752
LVYHLTKK GIQTRHLVVYNTGPAVGVDEVTLRRVFEAYGEVERV CPNPAAARVLISFHE VSSAARARAERNRPPEIEERVRVGVPGAAAASDVFAPTPGEPCPLLGRWLKVSFADVRVRHNGGXXXXXXXXXXXXXXXAPAVPSHLSGFKAFDALAAGGTASCDARPTPCPLCGRTCGGQRGLRMHLVGAHPLEVKDRDHFVQLLQRGSASLPPM+APGTDLAT+RNDHDGVGQATEEDGGAPAVGXXXXX LPPGFAAARAG+LGALKRLVEEEGWEPK ALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRT XXXXXXXXXXXXXXXXLETPRPVD AAAVS VGGGDGTLVSPGGERTFVSPDV AAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGGAGGLDWAKT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG VVPRRAWE+DEGGYTPEDVARLAGHVDLADWIAGAGV PSTD+TS
Sbjct: 54 LVYHLTKKVGIQTRHLVVYNTGPAVGVDEVTLRRVFEAYGEVERVCCPNPAAARVLISFHEIHGQMLVRHPVSSRPCPSRTTSGTAAYGGTLAERPDRVSSAARARAERNRPPEIEERVRVGVPGAAAASDVFAPTPGEPCPLLGRWLKVSFADVRVRHNGGXXXXXXXXXXXXXXXAPAVPSHLSGFKAFDALAAGGTASCDARPTPCPLCGRTCGGQRGLRMHLVGAHPLEVKDRDHFVQLLQRGSASLPPMEAPGTDLATRRNDHDGVGQATEEDGGAPAVGXXXXXXXXXXXXLPPGFAAARAGDLGALKRLVEEEGWEPKTALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTXXXXXXXXXXXXXXXXXLETPRPVDAAAAVSVVGGGDGTLVSPGGERTFVSPDVTAAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGGAGGLDWAKTNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVVPRRAWERDEGGYTPEDVARLAGHVDLADWIAGAGVTPSTDDTS 634
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: A0A6H5K2T6_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T6_9PHAE) HSP 1 Score: 750 bits (1937), Expect = 6.650e-260 Identity = 455/588 (77.38%), Postives = 465/588 (79.08%), Query Frame = 1
Query: 1 AASEDVPSAVSPPGGESSKVSSSGDNDAIGTXXXXXXXX----ALVYHLTKKSGIQTRHLVVYNTGPAVGVDEVTLRRVFEAYGEVERVYCPNPAAARVLISFHEVSSAARARAERNRPPEIEERVRVGVPGAAAASDVFAPTPGEPCPLLGRWLKVSFADVRVRHNGGXXXXXXXXXXXXXXXAPAVPSHLSGFKAFDALAAGGTASCDARPTPCPLCGRTCGGQRGLRMHLVGAHPLEVKDRDHFVQLLQRGSASLPPMKAPGTDLATKRNDHDGVGQATEEDGGAPAVGXXXXXKGRASAALPPGFAAARAGELGALKRLVEEEGWEPKIALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTSXXXXXXXXXXXXXXXXLETPRPVDTAAAVSFVGGGDGTLVSPGGERTFVSPDVAAAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGGAGGLDWAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVVPRRAWEKDEGGYTPEDVARLAGHVDLADWIAGAGVIPSTDETS 1752
AASED+ SAVSPP GES XXXXXXXX ALVYHLTKK+GIQTRHLVVYNTGP VGVDEVTLRRVFEAYGEVERVYCPNPAAARVLISFHEVSSAARARAERNRPPEIEERVRVGVPGAAAASDVFAPTPGEPCPLLGRWLK + R R G PA LSGFKAFDALAAGGTASCDARPTPCPLCGRTCGGQRGLRMHLVGAHPLEVKDR+HFVQLLQRGSASLPPM+APGTDLAT+RN H+G+GQ TEE GGAPAV XXXXX AL PGFAAARAG+LGALKRLVEEEGW PK ALDKNGSSPLDWAAGEGRLEVCR TS XXXXXXXXXXXXX LETPRPVD AAAVS VGGGDGTLVSPG PDV AAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGG GGLDWAKT XXXXXXXXXXXXXXXXXXX XXXX PRRAWEKDEGGYTPEDVARLA IAGAGV+ STDETS
Sbjct: 47 AASEDMSSAVSPPRGESXXXXXXXXXXXXXXXXXXXXXXXXXXALVYHLTKKAGIQTRHLVVYNTGPVVGVDEVTLRRVFEAYGEVERVYCPNPAAARVLISFHEVSSAARARAERNRPPEIEERVRVGVPGAAAASDVFAPTPGEPCPLLGRWLKAGSSQRRRRRLQGKL--------------PAATRXLSGFKAFDALAAGGTASCDARPTPCPLCGRTCGGQRGLRMHLVGAHPLEVKDRNHFVQLLQRGSASLPPMEAPGTDLATRRNGHNGIGQGTEEGGGAPAVXXXXXXXXXXXXALLPGFAAARAGDLGALKRLVEEEGWAPKTALDKNGSSPLDWAAGEGRLEVCR-----------------------TSLXXXXXXXXXXXXXLLLETPRPVDAAAAVSVVGGGDGTLVSPGXXXXXXXPDVTAAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGGPGGLDWAKTNLQXXXXXXXXXXXXXXXXXXXLAEQTTSXXXXXXXGPRRAWEKDEGGYTPEDVARLAXXXXXXXXIAGAGVMSSTDETS 597
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: A0A7R9TTM5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TTM5_MICPS) HSP 1 Score: 88.2 bits (217), Expect = 2.190e-15 Identity = 88/282 (31.21%), Postives = 118/282 (41.84%), Query Frame = 1
Query: 907 PGFAAARAGELGALKRLVEEEGWEPK-----IALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTSXXXXXXXXXXXXXXXXLETPRPVDTAAAVSFVGGGDGTLVSPGGERTFVSPDVAAAEGTTPLHWACW-GAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRR------VEEGGAGGLDWAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVVPRRAWEKDEGGYTPEDVARLAGHVDLADWIA 1716
PG A G+L + RLV E+GW+PK + +D GS L WAAGEG +++ RYL+ G D A R R R +XXXXXXXXXXXXXXXX R V D +GTTP A W G +A L+ + GAD ++N +GCN A W ++GDV+ L+ + G L A T + D G TP ++ARL G+ +LA W++
Sbjct: 33 PGLLACARGDLREVARLVNEDGWDPKSDVEGVGVDARGSCALHWAAGEGHVDIVRYLVDVVGEDPRRAQTKRDR---RGAXXXXXXXXXXXXXXXXTNAAR---------------------------VDADAPTTDGTTPFMLATWKGGSIAMRWLVDDAGADPTALNVFGCNAAQWAAMNGDVEALELLAELGVDVGVLNRNGHSALHKAATKGRRGACEWLIDVAGLGL---------------------KHMRADADGNTPAEMARLEGYAELASWLS 263
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: C1N3W7_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3W7_MICPC) HSP 1 Score: 86.7 bits (213), Expect = 8.010e-14 Identity = 87/282 (30.85%), Postives = 117/282 (41.49%), Query Frame = 1
Query: 907 PGFAAARAGELGALKRLVEEEGWEPK-----IALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTSXXXXXXXXXXXXXXXXLETPRPVDTAAAVSFVGGGDGTLVSPGGERTFVSPDVAAAEGTTPLHWACW-GAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRR------VEEGGAGGLDWAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVVPRRAWEKDEGGYTPEDVARLAGHVDLADWIA 1716
PG A G+L + RLV E+GW+PK + +D GS L WAAGEG +++ RYL+ G D A R R R +XXXXXXXXXXXXXXXX R V D +GTTP A W G +A L+ + G D ++N +GCN A W ++GDV+ L+ + G L A T + D G TP ++ARL G+ +LA W++
Sbjct: 273 PGLLACARGDLREVARLVNEDGWDPKSDVEGVGVDARGSCALHWAAGEGHVDIVRYLVDVVGEDPRRAQTKRDR---RGAXXXXXXXXXXXXXXXXTNAAR---------------------------VDADAPTTDGTTPFMLATWKGGSIAMRWLVDDAGVDPTALNVFGCNAAQWAAMNGDVEALELLAELGVDVGVLNRNGHSALHKAATKGRRGACEWLIDVAGLGL---------------------KHMRADADGNTPAEMARLEGYAELASWLS 503
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: A0A7S1TYC0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYC0_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 9.220e-14 Identity = 98/283 (34.63%), Postives = 121/283 (42.76%), Query Frame = 1
Query: 634 CPLCGRTCGGQRGLRMHLVGAHPLEVKDRDHFVQLLQRGSASLPPMKAPGTDLATKRNDHDGVGQATEEDGGAPAVGXXXXXKGRASAALPPGFAAARAGELGALKRLVEEEGWEPKIALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTSXXXXXXXXXXXXXXXXLETPRPVDTAAAVSFVGGGDGTLVSPGGERTFVSPDVAAAEGTTPLHWACWGAHLATCRLLFERGA------DHRSVNAYGCNVAHWCGLS-GDVDVCRWL 1461
C CGR G+ GL H++ AH V D + R S ++ A A + H A+ E APA L AA+ G+L AL+ L E W+ D+NG++PL WAAG G L V R+L+ E GVDA R GR XXXXXXXXXXXXXXXX G G + D+A +GTTP H+A W C L G D R N+YGCN A WC G D C +L
Sbjct: 21 CGACGRFAKGETGLWWHVMKAHLSSVVDAK---ETAARASEAIQLYDA----AAGRHTWH----AASMEPPLAPAEEPRRP--------LSRTLRAAQTGDLAALRALAAEGQWDAN-ERDRNGATPLLWAAGGGHLGVVRFLVEEAGVDAADLQTGRRGYAGRXXXXXXXXXXXXXXXXXXX-----------------GKGC-----------AKDIATQDGTTPFHFAAWQGRKDVCDFLAHEGTGAGGACDVRHSNSYGCNAALWCAQGVGGADFCAYL 255
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: A0A7S1TY08_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TY08_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.540e-13 Identity = 98/283 (34.63%), Postives = 121/283 (42.76%), Query Frame = 1
Query: 634 CPLCGRTCGGQRGLRMHLVGAHPLEVKDRDHFVQLLQRGSASLPPMKAPGTDLATKRNDHDGVGQATEEDGGAPAVGXXXXXKGRASAALPPGFAAARAGELGALKRLVEEEGWEPKIALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTSXXXXXXXXXXXXXXXXLETPRPVDTAAAVSFVGGGDGTLVSPGGERTFVSPDVAAAEGTTPLHWACWGAHLATCRLLFERGA------DHRSVNAYGCNVAHWCGLS-GDVDVCRWL 1461
C CGR G+ GL H++ AH V D + R S ++ A A + H A+ E APA L AA+ G+L AL+ L E W+ D+NG++PL WAAG G L V R+L+ E GVDA R GR XXXXXXXXXXXXXXXX G G + D+A +GTTP H+A W C L G D R N+YGCN A WC G D C +L
Sbjct: 171 CGACGRFAKGETGLWWHVMKAHLSSVVDAK---ETAARASEAIQLYDA----AAGRHTWH----AASMEPPLAPAEEPRRP--------LSRTLRAAQTGDLAALRALAAEGQWDAN-ERDRNGATPLLWAAGGGHLGVVRFLVEEAGVDAADLQTGRRGYAGRXXXXXXXXXXXXXXXXXXX-----------------GKGC-----------AKDIATQDGTTPFHFAAWQGRKDVCDFLAHEGTGAGGACDVRHSNSYGCNAALWCAQGVGGADFCAYL 405
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: A0A6U4EXL2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EXL2_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.410e-12 Identity = 75/188 (39.89%), Postives = 90/188 (47.87%), Query Frame = 1
Query: 919 AARAGELGALKRLVEEEGWEPKIALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTSXXXXXXXXXXXXXXXXLETPRPVDTAAAVSFVGGGDGTLVSPGGERTFVSPDVAAAEGTTPLHWACWGAHLATCRLLFERGA------DHRSVNAYGCNVAHWCGLS-GDVDVCRWL 1461
AA+ G+L AL+ L E W+ D+NG++PL WAAG G L V R+L+ E GVDA R GR XXXXXXXXXXXXXXXX G G + D+A +GTTP H+A W C L G D R N+YGCN A WC G D C +L
Sbjct: 79 AAQTGDLAALRALAAEGQWDAN-ERDRNGATPLLWAAGGGHLGVVRFLVEEAGVDAADLQTGRRGYAGRXXXXXXXXXXXXXXXXXXX-----------------GKGC-----------AKDIATQDGTTPFHFAAWQGRKDVCDFLAHEGTGAGGACDVRHSNSYGCNAALWCAQGVGGADFCAYL 237
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: A0A7S2UJ99_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ99_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.450e-10 Identity = 82/288 (28.47%), Postives = 120/288 (41.67%), Query Frame = 1
Query: 631 PCPLCGRTCGGQRGLRMHLVGAHPLEVKDRDHFVQLLQRGS--ASLPPMKAPGTDLATKRNDH--DGVGQATEEDGGAPAVGXXXXXKGRASAALPPGFAAARAGELGALKRLVEEEGWEPKIALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDAGGACPTRGRGEGRTSXXXXXXXXXXXXXXXXLETPRPVDTAAAVSFVGGGDGTLVSPGGERTFVSPDVAAAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGL-SGD--VDVCRWLSRRV 1473
PCP C + C G++GL H H + D + A +P P + + H + ++D + G L LK+ + G++PK+ LD+NG+S L WAAG G L++ R+L+ CG DA + GRT+XXXXXXXXXXXXXXXX + + V+ D + +GTT R L +RG D +N++GCN WC SGD +++ +WL V
Sbjct: 207 PCPYCTKWCKGEKGLWWHQQQQHGSQHSDAASQAAISANSHTLALVPYNPIPFENSVQTQTKHPTSSTNSSDQKDE----------------------MEMVKEGYLEGLKQAIAN-GYDPKVELDRNGASVLLWAAGCGHLQIVRFLVETCGCDANQKQSGKRSFAGRTTXXXXXXXXXXXXXXXXXDVVK---------------------------VNLDASTVDGTTAFCXXXXXXXXXXXRFLHDRGCDVHKLNSFGCNAMLWCAQGSGDCSMEIMQWLHEIV 444
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: A0A7S2DLB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLB6_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 9.910e-10 Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 907 PGFAAARAGELGALKRLVEEEGWEPKIALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDA 1086
PG AAR+G+L +L+ LV GW+P A DK+GS+ L WAAGEG L+VC+YL++ C V A
Sbjct: 13 PGLEAARSGDLASLQALVIG-GWDPHRATDKHGSNSLMWAAGEGHLQVCQYLVNTCKVPA 71
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Match: A0A061SCH4_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SCH4_9CHLO) HSP 1 Score: 68.9 bits (167), Expect = 3.280e-9 Identity = 54/177 (30.51%), Postives = 75/177 (42.37%), Query Frame = 1
Query: 964 EEGWEPKIALDKNGSSPLDWAAGEGRLEVCRYLLHECGVDA------GGACPTRGRGEGRTSXXXXXXXXXXXXXXXXLETPRPVDTAAAVSFVGGGDGTLVSPGGERTFVSPDVAAAE--GTTPLHWACWGAHLATCRLLFERGADHRSVN--AYGC-NVAHWCGLSGDVDVCRWL 1461
E W P+ +D++GS+ L WAAG GRLEVC++L+ EC V G XXXX + R +D A + D ++ D+ A G P+HWA G H++ C LF GA+ N ++GC N A W G V +WL
Sbjct: 15 ESTWHPEKIVDRHGSTALMWAAGNGRLEVCKFLIDECKVSVDQENKVGXXXXXXXXXXXXXXXXXXLYHAGADPQKQMKDGTRALDWAVFFGSLSVADWLAHE-------LACDINAKNYLGCAPVHWAAAGGHISACEWLFANGANFSXANQHSHGCLNKAAW---KGHAXVVQWL 181 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18473.1 >prot_Ecto-sp6_S_contig93.18473.1 ID=prot_Ecto-sp6_S_contig93.18473.1|Name=mRNA_Ecto-sp6_S_contig93.18473.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=359bp MHLVGAHPLEVKDRDHFVQLLQRGSASLPPMKAPGTDLATKRNDHDGVGQback to top mRNA from alignment at Ecto-sp6_S_contig93:302497..309848+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18473.1 ID=mRNA_Ecto-sp6_S_contig93.18473.1|Name=mRNA_Ecto-sp6_S_contig93.18473.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7352bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:302497..309848+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:302497..309848+ >mRNA_Ecto-sp6_S_contig93.18473.1 ID=mRNA_Ecto-sp6_S_contig93.18473.1|Name=mRNA_Ecto-sp6_S_contig93.18473.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:302497..309848+ (Ectocarpus species6 EcLAC_371)back to top |