mRNA_Ecto-sp6_S_contig9.18300.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18300.1
Unique NamemRNA_Ecto-sp6_S_contig9.18300.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: D7FV97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV97_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 1.330e-70
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 1 
Query:   55 QAEKAQRRVYMGPMARFKFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDR 402
            +AEKAQRRVYMGPMARFKFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDR
Sbjct:    4 EAEKAQRRVYMGPMARFKFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDR 119
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: UPI001C9D05F1 (alpha-soluble NSF attachment protein n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9D05F1)

HSP 1 Score: 103 bits (257), Expect = 8.150e-21
Identity = 77/288 (26.74%), Postives = 133/288 (46.18%), Query Frame = 1 
Query:  106 KFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDR-NRRLAIVHHIKAADFYRANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFNTPDTFLKAVLCLQCASGMPEARTQCCNCQRPRPLPDVHQDNHGAEAPSPRPTLNSVKATIVALGKAGSHFQGSMAYIFATDVALAEKEGDVDFFAARLYAYNNVYRLSAWYLRMLKIIGDHI 966
            K ++A    + A   F++AK++  AG A+ +   L  K  +   AA+ Y +AA C++K DP EAA C + AI ++     F+ AA+    +AE+ +++  +  LA+ H+ +AAD++R       A ++CLLK A   A  ++Y +A  ++++V    L   LL ++  + F +A LC  C   +        N Q      + +Q+ + A                         FQ S  Y     +    +E D++ F A +  Y+++ RL  WY  ML  I   I
Sbjct:   35 KVEEAVECYQRAANMFKMAKKWPSAGAAFCEAATLHSKAGSRHDAATNYVDAANCYKKTDPNEAANCLVKAIEIYTDMGRFTMAAKHHQSIAEMYESEAVDLELAVHHYEQAADYFRGEESISSA-NKCLLKVAQYAAQLKNYDKAIQIYEQVASASLESPLLKYSAKEYFFRAALCNLCVDPL--------NAQH---AIERYQEQYPA-------------------------FQDSREYKLVKSLIDLLEEQDLEGFTATVTDYDSISRLDPWYTSMLLRIKKQI 285
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: N6U287_DENPD (Uncharacterized protein (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6U287_DENPD)

HSP 1 Score: 100 bits (250), Expect = 6.470e-20
Identity = 60/176 (34.09%), Postives = 92/176 (52.27%), Query Frame = 1 
Query:  115 DASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDRNRRLAIVHHIKAADFYRANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFNTPDTFLKAVLCLQC 642
            +A  Y   AG  F++AK +  AG+A+     L  K  +    A  Y EAA CF+K D   A  CYL A+ ++ +   F TAA+L   +AELM+++R+   AI H+ +AA+            ++C+LK A   AL   Y +A  +FQ++    L   LL +N  + FL+A +C  C
Sbjct:   38 EAIEYYTRAGNLFKMAKNWLQAGLAFTDAADLHSKTEDTLEGAINYSEAANCFRKCDYSMAIECYLKALKMYSEMGRFLTAAKLHQTIAELMEDERDLAGAIRHYEQAAELLHEEN-HHSIANKCILKVAEFAALEGKYQKAIKMFQDIACFDLSSSLLQYNAKEYFLRAAICHLC 212
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: A0A0V1K0U5_TRIPS (Alpha-soluble NSF attachment protein (Fragment) n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1K0U5_TRIPS)

HSP 1 Score: 101 bits (252), Expect = 7.870e-20
Identity = 68/207 (32.85%), Postives = 114/207 (55.07%), Query Frame = 1 
Query:   34 KAQKWVQQAEKAQRRV--YMGPMARFKFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLE-EKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDRNRRLAIVHHI-KAADFYRANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFNTPDTFLKAVLCLQC 642
            KAQK +Q+AEK  R    + G     K  +A      AG  F++AK++ +AG A+ +  +L   + +    AA+ Y +A+ C++K +P++A  C L A+ ++ +   F+ AA+    VAEL + + N     +H+  KAAD+Y+     + + ++C+LK A   A  E Y +AA +F+E+G     + LL ++  D F KAVLC  C
Sbjct:   14 KAQKIMQEAEKKSRITSGFFGLFGGSKVDEACELYVKAGNLFKIAKKWTEAGDAFVRSAKLTLSRGDYKHEAATNYVDASNCYRKINPKQAIDCLLKAVEIYSEMGRFTMAAKYYMSVAELYEVECNDPEKAMHYYEKAADYYKGEES-KSSANKCMLKVAQFAAELEQYKKAADIFEEIGTSYAENTLLKYSAKDYFFKAVLCHLC 219
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: A0A0V1K0W4_TRIPS (Alpha-soluble NSF attachment protein (Fragment) n=3 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1K0W4_TRIPS)

HSP 1 Score: 101 bits (252), Expect = 8.490e-20
Identity = 68/207 (32.85%), Postives = 114/207 (55.07%), Query Frame = 1 
Query:   34 KAQKWVQQAEKAQRRV--YMGPMARFKFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLE-EKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDRNRRLAIVHHI-KAADFYRANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFNTPDTFLKAVLCLQC 642
            KAQK +Q+AEK  R    + G     K  +A      AG  F++AK++ +AG A+ +  +L   + +    AA+ Y +A+ C++K +P++A  C L A+ ++ +   F+ AA+    VAEL + + N     +H+  KAAD+Y+     + + ++C+LK A   A  E Y +AA +F+E+G     + LL ++  D F KAVLC  C
Sbjct:   14 KAQKIMQEAEKKSRITSGFFGLFGGSKVDEACELYVKAGNLFKIAKKWTEAGDAFVRSAKLTLSRGDYKHEAATNYVDASNCYRKINPKQAIDCLLKAVEIYSEMGRFTMAAKYYMSVAELYEVECNDPEKAMHYYEKAADYYKGEES-KSSANKCMLKVAQFAAELEQYKKAADIFEEIGTSYAENTLLKYSAKDYFFKAVLCHLC 219
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: A0A834IVM5_RHYFE (Uncharacterized protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834IVM5_RHYFE)

HSP 1 Score: 94.7 bits (234), Expect = 8.240e-18
Identity = 57/179 (31.84%), Postives = 96/179 (53.63%), Query Frame = 1 
Query:  106 KFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDRNRRLAIVHHIKAADFYRANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFNTPDTFLKAVLCLQC 642
            K ++A  Y   AG  F++AK +  AG+A+     L  ++ +   AA  Y +A  CF+K D  +A  C++ +I L+ +   F TAA+L   VAE M+++R+   AIVH+ +AA+ +R       A ++C+ K A   A+   Y +A  +FQ++    L   LL +N  +   +A +C  C
Sbjct:   35 KPEEAIEYYTRAGNLFKMAKNWIQAGIAFSDAADLNIQMEDQLEAAINYSDAGNCFKKCDLPKALECFMKSIKLYSEMGRFLTAAKLHQAVAEAMEDERDICRAIVHYEQAAELFRDENHHTMA-NKCMQKVAEFSAMEGKYQKAIKIFQDIACFDLSSSLLQYNAKEYLFRAAICHLC 212
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: A0A553PKF6_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PKF6_TIGCA)

HSP 1 Score: 94.7 bits (234), Expect = 8.670e-18
Identity = 82/290 (28.28%), Postives = 130/290 (44.83%), Query Frame = 1 
Query:  106 KFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQND-RNRRLAIVHHIKAADFYRANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFNTPDTFLKAVLCLQCASGMPEARTQCCNCQRPRPLPDVHQDNHGAEAPSPRPTLNSVKATIVALGKAGSHFQGSMAYIFATDVALAEKEGDVDFFAARLYAYNNVYRLSAWY----LRMLKIIGD 960
            K  +A      AG  +++ K++  AG  +    +   KL N   AA+ Y +AA C++K DPQEAA C   A++++     FS AA+    +AE+ +N+  +   A+ H   AADF+R       A ++ +LK A   A  E+Y  A  ++++V    L   LL ++  + F +A LC  C   +        N Q        +++ + A A S    L  +KA         SH +                E DV+ F   + AY++V RL  WY    LR+ K I D
Sbjct:   35 KVDEALEMYNRAGNLYKMGKKWSSAGNTFVTVAQHHVKLGNKHDAATSYVDAANCYKKSDPQEAANCLSKAVDIYTDMGRFSIAAKHHQTIAEIYENEIADLEKAMQHFEMAADFFRGEESNSSA-NKNMLKVAQYAAKLENYERAIQIYEQVASSALESSLLKYSAKEYFFRASLCHLCVDAL--------NAQH---AIQKYEEQYPAFADSREAKL--IKAL-------SSHLE----------------EQDVEAFTNEVKAYDSVSRLDQWYTTILLRVKKQIPD 287
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: D3PH46_LEPSM (Soluble NSF attachment protein n=5 Tax=Caligidae TaxID=72034 RepID=D3PH46_LEPSM)

HSP 1 Score: 94.0 bits (232), Expect = 1.590e-17
Identity = 73/278 (26.26%), Postives = 129/278 (46.40%), Query Frame = 1 
Query:  115 DASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQND-RNRRLAIVHHIKAADFYRANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFNTPDTFLKAVLCLQCASGMPEARTQCCNCQRPRPLPDVHQDNHGAEAPSPRPTLNSVKATIVALGKAGSHFQGSMAYIFATDVALAEKEGDVDFFAARLYAYNNVYRLSAWYLRML 945
            +A      AG  F++ K++ +AG  +        K+ N   AA+ + +AA C++K DPQEAA C   A+ ++     FS AA+    +AE+ +ND  +   A+ H+ +AAD +R +     A ++C+LK A   A  E+Y  A  ++++V +  L   LL ++  + F +A LC  C   +        N Q        +++ + A A S    L  +K+ +V +                       ++ D+D F   +  Y+++ RL AWY  +L
Sbjct:   38 EAMELYSRAGNAFKMGKKWPEAGNTFVTLAGHHTKMGNKHDAATNFVDAANCYKKTDPQEAANCLNKAVVIYTDMGRFSIAAKHLQNIAEIYENDVADLERAMQHYEQAADCFRIDESNSSA-NKCMLKVAQYAAQLENYERAIRIYEQVAKSALESSLLKYSAKEYFFRASLCHLCVDAL--------NAQH---AIQRYEEQYPAFADSRESKL--IKSLLVHI-----------------------EDQDIDAFTEEIKKYDSISRLEAWYTTLL 278
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: A0A0K2UBK9_LEPSM (Uncharacterized protein (Fragment) n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2UBK9_LEPSM)

HSP 1 Score: 90.5 bits (223), Expect = 1.080e-16
Identity = 55/181 (30.39%), Postives = 95/181 (52.49%), Query Frame = 1 
Query:  115 DASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQND-RNRRLAIVHHIKAADFYRANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFNTPDTFLKAVLCLQCASGM 654
            +A      AG  F++ K++ +AG  +        K+ N   AA+ + +AA C++K DPQEAA C   A+ ++     FS AA+    +AE+ +ND  +   A+ H+ +AAD +R +     A ++C+LK A   A  E+Y  A  ++++V +  L   LL ++  + F +A LC  C   +
Sbjct:   26 EAMELYSRAGNAFKMGKKWPEAGNTFVTLAGHHTKMGNKHDAATNFVDAANCYKKTDPQEAANCLNKAVVIYTDMGRFSIAAKHLQNIAEIYENDVADLERAMQHYEQAADCFRIDESNSSA-NKCMLKVAQYAAQLENYERAIRIYEQVAKSALESSLLKYSAKEYFFRASLCHLCVDAL 205
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BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Match: A0A1V9XNK3_9ACAR (Soluble NSF attachment protein-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XNK3_9ACAR)

HSP 1 Score: 90.9 bits (224), Expect = 1.740e-16
Identity = 72/286 (25.17%), Postives = 121/286 (42.31%), Query Frame = 1 
Query:  115 DASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDRNR-RLAIVHHIKAADFYRANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFNTPDTFLKAVLCLQCASGMPEARTQCCNCQRPRPLPDVHQDNHGAEAPSPRPTLNSVKATIVALGKAGSHFQGSMAYIFATDVALAEKEGDVDFFAARLYAYNNVYRLSAWYLRMLKIIGDHIQ 969
            +A      AG  F++AK +  AG A+++   L  K  N   A S   +AA C++  +P +A  C   A+ ++     F+ AA+    +AEL +++ N    A+ H+  AAD+Y++      A ++CLL+ A   A  E Y  A  ++++V    +   LL ++  + F +A LC                        DV    H          LN       +       F  S  Y F   +  A ++ D+D F A +  Y+++ RL  WY  +L  I   +Q
Sbjct:   37 EACELYSRAGNTFKMAKNWLQAGNAFREXXXLHRKSGNRHEAGSALVDAAKCYKSCEPTQAVECLKKAVEIYTDMGRFTMAAKHHVTIAELYESELNDIEKAVGHYEIAADYYKSEES-NSAANKCLLQVAKYAAQLEKYERAIEIYEQVASSCVDSSLLKYSAKEYFFRATLCHLAI--------------------DVLNATHA---------LNKYDEMYPS-------FADSREYKFGKSLVKAVEDEDIDAFTAAVTEYDSISRLDKWYTSILLHIKRGLQ 285
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV97_ECTSI1.330e-7099.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001C9D05F18.150e-2126.74alpha-soluble NSF attachment protein n=1 Tax=Ventu... [more]
N6U287_DENPD6.470e-2034.09Uncharacterized protein (Fragment) n=2 Tax=Dendroc... [more]
A0A0V1K0U5_TRIPS7.870e-2032.85Alpha-soluble NSF attachment protein (Fragment) n=... [more]
A0A0V1K0W4_TRIPS8.490e-2032.85Alpha-soluble NSF attachment protein (Fragment) n=... [more]
A0A834IVM5_RHYFE8.240e-1831.84Uncharacterized protein n=1 Tax=Rhynchophorus ferr... [more]
A0A553PKF6_TIGCA8.670e-1828.28Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
D3PH46_LEPSM1.590e-1726.26Soluble NSF attachment protein n=5 Tax=Caligidae T... [more]
A0A0K2UBK9_LEPSM1.080e-1630.39Uncharacterized protein (Fragment) n=2 Tax=Lepeoph... [more]
A0A1V9XNK3_9ACAR1.740e-1625.17Soluble NSF attachment protein-like n=1 Tax=Tropil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2797684..2803213 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop1
Start1
Seed ortholog score110.2
Seed ortholog evalue3.6e-21
Seed eggNOG ortholog400682.PAC_15717606
Preferred nameNAPA
Model size1830
KEGG koko:K15296
KEGG Pathwayko04138,ko04721,map04138,map04721
Hectar predicted targeting categoryother localisation
GOsGO:0000149,GO:0000278,GO:0000281,GO:0000910,GO:0001505,GO:0001654,GO:0001671,GO:0001745,GO:0002009,GO:0002090,GO:0002165,GO:0003674,GO:0005483,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006888,GO:0006890,GO:0006891,GO:0006897,GO:0006900,GO:0006901,GO:0006903,GO:0006906,GO:0006996,GO:0007049,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007274,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008047,GO:0008104,GO:0008150,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010646,GO:0010807,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016079,GO:0016082,GO:0016192,GO:0017156,GO:0017157,GO:0017158,GO:0019222,GO:0019905,GO:0022008,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0023052,GO:0023061,GO:0030100,GO:0030154,GO:0030182,GO:0030234,GO:0030424,GO:0031090,GO:0031201,GO:0031323,GO:0031410,GO:0031629,GO:0031982,GO:0032386,GO:0032501,GO:0032502,GO:0032781,GO:0032879,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033267,GO:0034214,GO:0034613,GO:0034622,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035249,GO:0035295,GO:0035494,GO:0036465,GO:0040007,GO:0042886,GO:0042995,GO:0043005,GO:0043085,GO:0043195,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043462,GO:0043624,GO:0043679,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0044877,GO:0045026,GO:0045055,GO:0045176,GO:0045184,GO:0045202,GO:0046903,GO:0046907,GO:0046928,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048259,GO:0048284,GO:0048488,GO:0048489,GO:0048513,GO:0048526,GO:0048563,GO:0048569,GO:0048589,GO:0048592,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050804,GO:0051046,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051301,GO:0051336,GO:0051345,GO:0051588,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060560,GO:0060562,GO:0060589,GO:0060590,GO:0060627,GO:0061024,GO:0061025,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070044,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0090114,GO:0090174,GO:0090596,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098772,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099177,GO:0099500,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0150034,GO:1902803,GO:1903047,GO:1903305,GO:1903530,GO:2000300
Exons11
EggNOG free text desc.Attachment Protein
EggNOG OGs38GSG@33154,3BECS@33208,KOG1586@1,KOG1586@2759
Ec32 ortholog descriptionNSF attachment protein
Ec32 orthologEc-14_000280.1
Cds size1830
COG Functional cat.U
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18300.1prot_Ecto-sp6_S_contig9.18300.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 2797684..2803213 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350548.7203422-CDS-Ecto-sp6_S_contig9:2797683..27977401682350548.7203422-CDS-Ecto-sp6_S_contig9:2797683..2797740Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2797684..2797740 +
1682350548.7312114-CDS-Ecto-sp6_S_contig9:2798150..27982621682350548.7312114-CDS-Ecto-sp6_S_contig9:2798150..2798262Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2798151..2798262 +
1682350548.7396705-CDS-Ecto-sp6_S_contig9:2798943..27990661682350548.7396705-CDS-Ecto-sp6_S_contig9:2798943..2799066Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2798944..2799066 +
1682350548.7503698-CDS-Ecto-sp6_S_contig9:2799362..27994711682350548.7503698-CDS-Ecto-sp6_S_contig9:2799362..2799471Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2799363..2799471 +
1682350548.7581656-CDS-Ecto-sp6_S_contig9:2799831..27999281682350548.7581656-CDS-Ecto-sp6_S_contig9:2799831..2799928Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2799832..2799928 +
1682350548.7659798-CDS-Ecto-sp6_S_contig9:2800274..28003341682350548.7659798-CDS-Ecto-sp6_S_contig9:2800274..2800334Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2800275..2800334 +
1682350548.7739968-CDS-Ecto-sp6_S_contig9:2800537..28006751682350548.7739968-CDS-Ecto-sp6_S_contig9:2800537..2800675Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2800538..2800675 +
1682350548.7814813-CDS-Ecto-sp6_S_contig9:2801033..28012751682350548.7814813-CDS-Ecto-sp6_S_contig9:2801033..2801275Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2801034..2801275 +
1682350548.7890854-CDS-Ecto-sp6_S_contig9:2801646..28017201682350548.7890854-CDS-Ecto-sp6_S_contig9:2801646..2801720Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2801647..2801720 +
1682350548.7967541-CDS-Ecto-sp6_S_contig9:2802099..28022151682350548.7967541-CDS-Ecto-sp6_S_contig9:2802099..2802215Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2802100..2802215 +
1682350548.804248-CDS-Ecto-sp6_S_contig9:2802511..28032131682350548.804248-CDS-Ecto-sp6_S_contig9:2802511..2803213Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2802512..2803213 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18300.1

>prot_Ecto-sp6_S_contig9.18300.1 ID=prot_Ecto-sp6_S_contig9.18300.1|Name=mRNA_Ecto-sp6_S_contig9.18300.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=610bp
MADHMITTYREKAQKWVQQAEKAQRRVYMGPMARFKFQDASNYLELAGQC
FRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAA
ACYLSAINLFCQRQLFSTAARLECEVAELMQNDRNRRLAIVHHIKAADFY
RANTCFEEATDRCLLKAAHALALSESYVEAASLFQEVGQRMLVDDLLGFN
TPDTFLKAVLCLQCASGMPEARTQCCNCQRPRPLPDVHQDNHGAEAPSPR
PTLNSVKATIVALGKAGSHFQGSMAYIFATDVALAEKEGDVDFFAARLYA
YNNVYRLSAWYLRMLKIIGDHIQVKAVQLRKKRALQAKTYVSFCNFTLQE
KLRRRQRAEERAKDRIKRRQQDLSIQDDSSQGTASEQENDFASSSEGTLP
TNTYTKPAQSPSNPSSESGGSDSDDEDDSSSSDSGSDDSEASSGTSDSSP
SGSSSSLESETSGSSEPSKEDETNKTPAKKSSAKMKAAGGAAGASPTVSD
SDLSATRSGTGSENSNSTIVNAPNTKMKNKGSVRFAKSTSSASHSGASNA
TSGSAESSGGSEGGSSSGSSEDSKGAKKKAGKEKSGARLQGKQSKSEGGK
KTKSSFWKR*
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mRNA from alignment at Ecto-sp6_S_contig9:2797684..2803213+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18300.1 ID=mRNA_Ecto-sp6_S_contig9.18300.1|Name=mRNA_Ecto-sp6_S_contig9.18300.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5530bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2797684..2803213+ (Ectocarpus species6 EcLAC_371)
ATGGCGGATCATATGATTACAACGTACAGAGAGAAGGCTCAAAAATGGGT
ACAGCAGGTAGGCGCATGTGCAGGCAAGATCTTGCTGGTCCAAAGATACT
CCGTGGTTCGTGCGGTATCTACATGTATGTAGAGCCACGTGGTTTGCTGT
TTCGGGGGAACATTGATCAGGCATCGCACATGGAATTGCATTCATTTCAT
CGGGATGTGCACATATCACAGACCAACCCTAGCTTTGGATGTGATTCCGA
TAACTGTGTAAGTTACCTCGGCTATGCGTAAATGCTTAGTCTACAGACTA
CAGACAGCGTAGGTGCGAGGCTCATTTGGCACCTCCCGCTGTAGTAGTCT
ATATGCCGCAACGTCTATGTAGGCTACTCAACAATTAGGAAAGGCCCAAT
CAAGTCATGCGGGATGCTACATGATAATACTTATTGCGACACATTCAATC
TTCGCTATCTGCATCAGGCTGAAAAGGCTCAACGGCGAGTGTACATGGGC
CCGATGGCGCGTTTCAAGTTCCAAGATGCGTCCAACTACCTGGAGCTTGC
GGGGCAATGCTTCCGTGTTGCGAAACGATGTGAGTGCGCACGCTCAGCAG
GGTTAGCTATCAGAGGTCGCGGAGCATATTCTGCTCCAAACCCTTTTAAC
ACTGTTCAAAAGTCTAATACTGCTGTGCAGTAGTCCCATGCAGCGCGAGC
AGAGTTTATGTGGTGGACGTAAGGTCTGTGCTCGTTGATGCTGTAGCTTT
GGAATGTCACTACATACTGTAGGACTACTAATCTACTCTGTTCACCGTTA
TGGGACGTTTGAAATCTACATGCGTGATGCGTGGCGTGTACAGGGTAGAC
GGCTATCGTTGACGAAAGGGCCTTCGTTGGTTGTGCCGGCGCAAAAAACG
ATTGATGAAATGCATACACAGCGTGCGCCGTTCTTCAGAGCGCATCATTC
CCTACAGGCATGGTTGCTGAACTCAACAAGGGCAGTGACTGTAGTTGCCT
CTGGCCAAAGCTGCCACTCTTTCAAACACCCTCAGAAGGACCCTTAAGAT
GCATCTTCGAGATACCTGATTGGTGTGGGCAGATCCTTCTGTCACATGTT
CACATATTTGCTCTCTCTCTCTCGCAATTCGCCGACCAGCTTTCTTGAGC
GTTCTCTCGCTGCGATTCTTGACAGACAGGACTGTAATGTGATCATCGAT
GTGTTCCTGCTTTTCTTTAGTGGCTTCGATACGTATGTGCCAACGTGTGC
TTTGCGACAGTTCAAGATGCCGGAGTGGCATACAAGCAATGCGGTCGCCT
GGAGGAGAAGCTAAACAACCCGGAGGTTGCGGCGTCGTTTTACCATGAAG
CTGCCCTCTGCTTTCAGAAAGACGATCCACAAGGTGCAATTTACTACAGC
ACGGCGGTCTGCCGTTGGAGCTCATCAGTATCTAGTTCAATGCTGTTGAC
GTACGTAGGCCACAAGGTACGCAGAACGCAGTTCGTCGGGTAGCTGCCGT
CGCAGAGCCTTTGAAGATGCAGATACAGACAAGAGTCTTCGTCGCATGGG
TCGGGCCCCCGACGTGGGGGTTTGCGTGTAGAAGGTAGCTTGCAGGGTCC
GACCTGCTTGCAAATAGCATTAACTTGACCCATGGCCCCTCACTCCTGCT
ACGTACCGAACCGCTGTTTAATGACACAGAGGCCGCCGCGTGCTATCTAA
GCGCAATCAACCTCTTCTGTCAAAGGCAACTGTTTTCCACGGCGGCACGG
CTAGAATGCGAAGTGGCTGAGTTGATGCAGAACGACAGGTGAATAGTCTA
ACCGTTCACCGATGGGTTGATACACCCGGCTCATCTAACTTTGCATAGAT
AGTTCAATCGATGGGCACCATGAGAAAAGAGAGATGCACCAGTGAAATCC
CCACGGATGCCGCGCCCAACAAACCTCCACGGTTATCAGCACAACACTTC
TCACTAGCTGTGGTCCTTTCAATACAAACGATAGCCTTCTCTTTCCGCGA
CAAACAAGGCCCACAACCCAACGGCACGACAAGTTTTCGTTACCGTGTTG
ACGCCAGGCAGGACCTGCAAGTGCATTCAATCGCAACCAAACGAAGCACA
GCAGTACTAAAAGTGGTGAGATTCGACCGTCGCTCGTGGTTTCTTCAGGA
ACCGACGGCTAGCAATCGTGCATCACATCAAGGCGGCCGATTTCTACCGA
GCAAACACGTGCTTTGAAGAGGCTACCGACCGTTGTCTGCTCAAGGTCCG
TATACCTGCATCCAGAAGCAGGATATCACTCGTCCCGATGGCCTCATCAA
GCCAGGCACTCAGTATCTCTCGCCAGGATTGCGCAACTTGCGTTCATTGT
TCGGCTCATCTTAAAACTGACGACGAGGTTTCGAAGTACCAAGTGCGCCG
CTGATAGGAGTATTACGAGTACTCGCGTCTCTGGTGCTCGGGCTCGTGCG
AGGGCTCAACGAAAGTGTCACCCCCGCTGTCGTCGCTCTGCGACACCCAG
GAACTGTAATATAAGCATAGATATTTTCGTATCATGACCATGTAAGGCAA
ACAGCACTACGTCTTCCTCGTGTGCACTGTGTTTGTCTCAGGCCGCTCAC
GCGCTTGCACTGAGTGAAAGCTACGTGGAAGCAGCTTCTCTTTTCCAGGA
GGTGAGGCCCAATTCGCAACCGTATCGCACACCATCCCTGGTGGGAAGTT
TGGCAGACGCAATAATCTATTTTGCACAGCTTACACCTGCCTTGGAGGCT
TGCCAACACACAACCTGCCAGCGACGATGTGTTTCGCCGCCTATCGTACT
GAACGGTCTTGCCCTGGTGTTTGTTTTTTTGTGCTTGTCAACTGCCCTTG
CAAGGTCGGGCAACGAATGCTAGTCGACGACTTGCTCGGGTTTAATACTC
CGGACACGTTCCTGAAGGCTGTCTTGTGTCTTCAGTGCGCCAGTGGAATG
CCCGAGGCGAGAACACAATGCTGCAACTGCCAACGACCGAGGGTGAATTC
TGGCCACAGATCGCCAAAATCGACCGTCTAGAAGCACGGCTCGGCCACCT
AATGATAGCCGAGAGAATGGGGTAAAGGTACACCGGTGCACTCACACACC
AATAGGCAGTCATGAGCACATAACTCGTCCAGACATTAGCAACACGTACA
GCTGTAAGGCCCTGCGTGCCCCACCCCACGCTGCAACCCGGCCTACGAGA
AACCCGCACTCAAACGCTTGAGGACTTGCCGAGAGTTACAATGCACACTT
GGAACTCGCCTCGCGCGTGTGTTTCCACCATACCGCCCCAACGCTATGGT
ACAGAACGACGTGCCGCGTCTTACCGCCTCTCTCCGCGCACCCTTCGCAG
CCATTGCCCGATGTGCATCAGGACAACCATGGGGCTGAGGCTCCGTCGCC
GCGGCCAACGTTGAACTCTGTGAAGGCTACGATAGTGGCCTTGGGGAAGG
CAGGCTCTCATTTCCAAGGGTCGATGGCCTACATCTTTGCTACGGATGTA
GCGTTGGCAGAAAAGGAGGGAGACGTGGACTTCTTCGCGGCAAGGCTGTA
CGCCTACAACAACGTTTACCGTCTGAGCGCTTGGTACCTACGGTGAGTTC
GTTTAGCTGATTGTGCCACTAACAGGCACCCGTGCAAGATGAAATCGAAT
ACAGGTTGATGCAGACAAGCGACAAAGGTTGATAGACGTGTTCCATGACT
GAAGCGAGATGCGCGAATATCGATCGTCTGGTCGGGGGGGGACCCTTTAC
GTAATTGGTCGTTTGAGGTTGTTGGACGTTTGTTTTCTGTCAAACACACT
CGCTGCGAGCATTGCGTTTGTTTTTTATCGTTCACCACGTAATTGTCGAA
GCGCGAGAAACCAAGGAGAAACGACAGCAAGGACGTAGAGTGTTCGCCGC
TGGAATAACCAGATCGCCGTCATGTCGTCCGTCGCATTCGACCTTTCCTC
ACCTGCATGGTAGCATGCTGAAGATAATTGGTGATCATATACAGGTTAAA
GCCGTCCAGCTGCGGAAGAAGCGCGCTCTACAGGCAAGTTCTCGTTTCTT
GGAGTTGCTGCAATGCCTCATCCAACCTGTGGAAACATACGGTAGAGTCG
CCACTCATGAAATCGGTGGTCGCTCAGGCTTTGCCGTGCTCATATGCAGC
AATAACTTAGGGTTAGGGCTAGATCAAACACCGCACAACCGTAAGAGAGT
ACGACATGACACTTTTCGTTGACCTACCACGATTGTTAATACTGGGTTCT
GCTCGGTGATTCAGTCTCGTGGCCTGTAGATTTTCGGTGCAACAACGACG
CCACTGGTAGAAGGTATACCGAGTTGTTGTAGTCATCGCCATGAAGGACA
CACCACGAGAGCACCAAGATTACGGCGCCCTCCCAGCCGCGGTGGTACCC
CTGAAAGAGGGATGAGAAACTTACGTCTCTTTTTGCAATTTTACTCTGCA
GGAGAAGCTCCGGCGAAGACAACGAGCGGAGGAACGCGCAAAGGATCGCA
TCAAAAGGCGGCAGCAAGACCTCAGCATACAGGTTCAGTGCGAAGTCATG
TTGACTGTGTGCATTGGGTTGAAGAATGTCCAAGCTTGAACCGACGACGT
ATGTTGAGGATATGGGTTTACGGAGTTGGGGCACCATGTGGAGGATGTTT
CGCTACTCGCTCAGCGATAGGCACCTTGAGCCGATATGACCCCGCATGAA
GACAACGGGCACACTCTCCCGCGGATGAAGGCGATGAACAAAGCGTCCGC
ATTAGTCCTGTTGCCACACCTTGCAAAGACCCAAACCTCCACACATTCGT
GTGCACCTCGCACGTTTCCTGTCGACAGGACGACTCGTCCCAAGGAACAG
CGTCCGAACAGGAGAACGACTTCGCGTCGTCCTCAGAGGGCACTCTCCCA
ACTAACACGTACACAAAGCCGGCCCAATCACCTTCGAACCCGTCGTCTGA
GTCCGGTGGCTCGGATTCCGACGACGAGGACGACAGCAGCAGCAGTGATA
GCGGCAGCGACGACAGCGAGGCATCGTCAGGCACCAGCGATTCGAGCCCC
AGCGGTTCGTCGTCTTCGTTGGAGTCGGAAACCTCTGGAAGCTCAGAACC
CTCGAAAGAAGACGAAACCAACAAAACCCCGGCAAAGAAGTCATCTGCGA
AAATGAAGGCGGCGGGAGGAGCTGCAGGGGCATCGCCGACCGTCTCTGAC
TCGGACTTGTCCGCGACGAGGTCGGGGACTGGTTCTGAGAACAGCAATAG
CACTATTGTAAACGCACCCAACACCAAGATGAAAAACAAGGGCTCGGTCA
GGTTTGCCAAGAGCACCTCTTCCGCCTCTCATTCTGGGGCGTCCAATGCG
ACATCTGGGTCGGCGGAATCTAGCGGGGGTAGCGAGGGGGGGTCATCTTC
CGGGTCATCAGAGGACTCGAAAGGTGCCAAAAAGAAAGCAGGGAAGGAAA
AATCAGGGGCAAGATTACAGGGGAAACAGAGCAAGAGTGAGGGGGGAAAG
AAGACGAAGTCTAGCTTCTGGAAGAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:2797684..2803213+

>mRNA_Ecto-sp6_S_contig9.18300.1 ID=mRNA_Ecto-sp6_S_contig9.18300.1|Name=mRNA_Ecto-sp6_S_contig9.18300.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1830bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2797684..2803213+ (Ectocarpus species6 EcLAC_371)
ATGGCGGATCATATGATTACAACGTACAGAGAGAAGGCTCAAAAATGGGT
ACAGCAGGCTGAAAAGGCTCAACGGCGAGTGTACATGGGCCCGATGGCGC
GTTTCAAGTTCCAAGATGCGTCCAACTACCTGGAGCTTGCGGGGCAATGC
TTCCGTGTTGCGAAACGATTTCAAGATGCCGGAGTGGCATACAAGCAATG
CGGTCGCCTGGAGGAGAAGCTAAACAACCCGGAGGTTGCGGCGTCGTTTT
ACCATGAAGCTGCCCTCTGCTTTCAGAAAGACGATCCACAAGAGGCCGCC
GCGTGCTATCTAAGCGCAATCAACCTCTTCTGTCAAAGGCAACTGTTTTC
CACGGCGGCACGGCTAGAATGCGAAGTGGCTGAGTTGATGCAGAACGACA
GGAACCGACGGCTAGCAATCGTGCATCACATCAAGGCGGCCGATTTCTAC
CGAGCAAACACGTGCTTTGAAGAGGCTACCGACCGTTGTCTGCTCAAGGC
CGCTCACGCGCTTGCACTGAGTGAAAGCTACGTGGAAGCAGCTTCTCTTT
TCCAGGAGGTCGGGCAACGAATGCTAGTCGACGACTTGCTCGGGTTTAAT
ACTCCGGACACGTTCCTGAAGGCTGTCTTGTGTCTTCAGTGCGCCAGTGG
AATGCCCGAGGCGAGAACACAATGCTGCAACTGCCAACGACCGAGGCCAT
TGCCCGATGTGCATCAGGACAACCATGGGGCTGAGGCTCCGTCGCCGCGG
CCAACGTTGAACTCTGTGAAGGCTACGATAGTGGCCTTGGGGAAGGCAGG
CTCTCATTTCCAAGGGTCGATGGCCTACATCTTTGCTACGGATGTAGCGT
TGGCAGAAAAGGAGGGAGACGTGGACTTCTTCGCGGCAAGGCTGTACGCC
TACAACAACGTTTACCGTCTGAGCGCTTGGTACCTACGCATGCTGAAGAT
AATTGGTGATCATATACAGGTTAAAGCCGTCCAGCTGCGGAAGAAGCGCG
CTCTACAGGCAAAAACTTACGTCTCTTTTTGCAATTTTACTCTGCAGGAG
AAGCTCCGGCGAAGACAACGAGCGGAGGAACGCGCAAAGGATCGCATCAA
AAGGCGGCAGCAAGACCTCAGCATACAGGACGACTCGTCCCAAGGAACAG
CGTCCGAACAGGAGAACGACTTCGCGTCGTCCTCAGAGGGCACTCTCCCA
ACTAACACGTACACAAAGCCGGCCCAATCACCTTCGAACCCGTCGTCTGA
GTCCGGTGGCTCGGATTCCGACGACGAGGACGACAGCAGCAGCAGTGATA
GCGGCAGCGACGACAGCGAGGCATCGTCAGGCACCAGCGATTCGAGCCCC
AGCGGTTCGTCGTCTTCGTTGGAGTCGGAAACCTCTGGAAGCTCAGAACC
CTCGAAAGAAGACGAAACCAACAAAACCCCGGCAAAGAAGTCATCTGCGA
AAATGAAGGCGGCGGGAGGAGCTGCAGGGGCATCGCCGACCGTCTCTGAC
TCGGACTTGTCCGCGACGAGGTCGGGGACTGGTTCTGAGAACAGCAATAG
CACTATTGTAAACGCACCCAACACCAAGATGAAAAACAAGGGCTCGGTCA
GGTTTGCCAAGAGCACCTCTTCCGCCTCTCATTCTGGGGCGTCCAATGCG
ACATCTGGGTCGGCGGAATCTAGCGGGGGTAGCGAGGGGGGGTCATCTTC
CGGGTCATCAGAGGACTCGAAAGGTGCCAAAAAGAAAGCAGGGAAGGAAA
AATCAGGGGCAAGATTACAGGGGAAACAGAGCAAGAGTGAGGGGGGAAAG
AAGACGAAGTCTAGCTTCTGGAAGAGGTGA
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