mRNA_Ecto-sp6_S_contig9.18219.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig9.18219.1
Unique Name	mRNA_Ecto-sp6_S_contig9.18219.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

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BLAST of mRNA_Ecto-sp6_S_contig9.18219.1 vs. uniprot
Match: D7FTS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS0_ECTSI)

HSP 1 Score: 627 bits (1617), Expect = 1.440e-223
Identity = 337/341 (98.83%), Postives = 338/341 (99.12%), Query Frame = 3

Query:   75 MLSRVANAGARGALRARLPAASAGGRARVPPLIQPAFQSFHAGLPSRESAVDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPLALFLTVPALCREWYVMTEETMLMGCFFLFLGAAMDFGGEGVGKYFDDQTAEIKRAQQSAEEAQIKRVTGDLATEKARLVEMQQMDAISKAIAYGNTRRNEAEAMAAPHTSRESTVKLLEALRGAKIKRVADLRNAEIATALTEVVAKVSADKKLKKAALDNALMTLADPSKAAKVDPVSEVFAQYWKQKAIDTEKNKNKPVALTPEQIAANEADIRSLCEKVGQDPAMLLASMPKTYTADTPTLFS 1097
            MLSRVANAGARGALRARLPAASAGGRARVPPLIQPAFQSFHAGLPSRESAVDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPLALFLTVPALCREWYVMTEETMLMGCFFLFLGAAMDFGGEGVGKYFDDQTAEIKRAQQSAE+ QIKRVTGDLATEKARLVEMQQMDAISKAIAYGNTRRNEAEAMAAPH SRESTVKLLEALRGAKIKRVADLRNAEIATALTEVVAKVSADKKLKKAALDNALMTLADPSKAAKVDPVSEVFAQYWKQKAIDTEKNKNKPVALTPEQIA NEADIRSLCEKVGQDPAMLLASMPKTYTADTPTLFS
Sbjct:    1 MLSRVANAGARGALRARLPAASAGGRARVPPLIQPAFQSFHAGLPSRESAVDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPLALFLTVPALCREWYVMTEETMLMGCFFLFLGAAMDFGGEGVGKYFDDQTAEIKRAQQSAEQEQIKRVTGDLATEKARLVEMQQMDAISKAIAYGNTRRNEAEAMAAPHMSRESTVKLLEALRGAKIKRVADLRNAEIATALTEVVAKVSADKKLKKAALDNALMTLADPSKAAKVDPVSEVFAQYWKQKAIDTEKNKNKPVALTPEQIATNEADIRSLCEKVGQDPAMLLASMPKTYTADTPTLFS 341

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BLAST of mRNA_Ecto-sp6_S_contig9.18219.1 vs. uniprot
Match: A0A836CD66_9STRA (ATP synthase subunit b n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD66_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.800e-28
Identity = 90/279 (32.26%), Postives = 144/279 (51.61%), Query Frame = 3

Query:  153 ARVPPLIQPAFQSFHAGLPSRESAVDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPLALFLTVPALCREWYVMTEETMLMGCFFLFLGAAMDFGGEGVGKYFDDQTAEIKRAQQSAEEAQIKRVTGDLATEKARLVE---MQQMDAISKAIAYGNTRRNEAEAMAA--PHTSRESTVKLLEALRGAKIKRVADLRNAEIATALTEVVAKVSADKKLKKAALDNALMTLADPSKAAKVDPVSEVFAQYWKQKAIDTEKNKNKPVALTP 974
            AR+ P   PA Q FHAG+P+R+           E+ +  + +K+      +   +E   L    R +P+ L L +PAL +EW V++EET L+GCF LF+G      G+ +G   D Q   I  A+   E+A I+ +   +A   ARL     M  + A+ +      T   +A+ +    PH  RE TV +L+    A+       ++A + +A+  V  +V +DKKLKK ALD AL++LADP+KA   D V+ +F Q++K  +   +K  ++   +TP
Sbjct:   17 ARLAPRTAPATQHFHAGIPARK-----------EETQPAETSKILLTPGTI---VEKLGLHDWTRALPVGLILAIPALNQEWIVLSEETQLLGCFMLFVGTIYTKFGDSIGAALDAQADAILDARNKEEDASIEVIKETIAFHHARLASAGIMSDLIALER-----ETMEKQAKLLTVKVPHDMRELTVAMLDTKAAAEANEWHAAQDALVKSAVDTVTEQVQSDKKLKKTALDEALLSLADPAKAPATDAVTGLFTQFFKDTSAQAQKEASQEKTVTP 276

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig9.18219.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig9.18219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FTS0_ECTSI	1.440e-223	98.83	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CD66_9STRA	5.800e-28	32.26	ATP synthase subunit b n=1 Tax=Tribonema minus Tax...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig9	contig	Ecto-sp6_S_contig9:1956982..1964480 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	637.5
Seed ortholog evalue	3.6e-180
Seed eggNOG ortholog	2880.D7FTS0
Model size	1484
Hectar predicted targeting category	mitochondrion
Exons	10
EggNOG free text desc.	Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
EggNOG OGs	2CWB7@1,2RU2Z@2759
Ec32 ortholog description	ATPase, F0 complex, B chain/subunit B/MI25
Ec32 ortholog	Ec-14_001070.1
Cds size	1026
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig9.18219.1	prot_Ecto-sp6_S_contig9.18219.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig9 1958673..1964071 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350537.8462405-UTR-Ecto-sp6_S_contig9:1956981..1957033	1682350537.8462405-UTR-Ecto-sp6_S_contig9:1956981..1957033	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig9 1956982..1957033 +
1682350537.8683321-UTR-Ecto-sp6_S_contig9:1958650..1958672	1682350537.8683321-UTR-Ecto-sp6_S_contig9:1958650..1958672	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig9 1958651..1958672 +
1682350537.969911-UTR-Ecto-sp6_S_contig9:1964071..1964244	1682350537.969911-UTR-Ecto-sp6_S_contig9:1964071..1964244	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig9 1964072..1964244 +
1682350537.979811-UTR-Ecto-sp6_S_contig9:1964269..1964480	1682350537.979811-UTR-Ecto-sp6_S_contig9:1964269..1964480	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig9 1964270..1964480 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350537.883502-CDS-Ecto-sp6_S_contig9:1958672..1958799	1682350537.883502-CDS-Ecto-sp6_S_contig9:1958672..1958799	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig9 1958673..1958799 +
1682350537.9018173-CDS-Ecto-sp6_S_contig9:1959707..1959829	1682350537.9018173-CDS-Ecto-sp6_S_contig9:1959707..1959829	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig9 1959708..1959829 +
1682350537.9163256-CDS-Ecto-sp6_S_contig9:1960160..1960340	1682350537.9163256-CDS-Ecto-sp6_S_contig9:1960160..1960340	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig9 1960161..1960340 +
1682350537.9246485-CDS-Ecto-sp6_S_contig9:1960943..1960994	1682350537.9246485-CDS-Ecto-sp6_S_contig9:1960943..1960994	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig9 1960944..1960994 +
1682350537.9330792-CDS-Ecto-sp6_S_contig9:1961576..1961687	1682350537.9330792-CDS-Ecto-sp6_S_contig9:1961576..1961687	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig9 1961577..1961687 +
1682350537.941895-CDS-Ecto-sp6_S_contig9:1962330..1962465	1682350537.941895-CDS-Ecto-sp6_S_contig9:1962330..1962465	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig9 1962331..1962465 +
1682350537.9514332-CDS-Ecto-sp6_S_contig9:1963116..1963272	1682350537.9514332-CDS-Ecto-sp6_S_contig9:1963116..1963272	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig9 1963117..1963272 +
1682350537.9607477-CDS-Ecto-sp6_S_contig9:1963927..1964071	1682350537.9607477-CDS-Ecto-sp6_S_contig9:1963927..1964071	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig9 1963928..1964071 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig9:1956982..1964480+
coding sequence from alignment at Ecto-sp6_S_contig9:1956982..1964480+

protein sequence of mRNA_Ecto-sp6_S_contig9.18219.1

>prot_Ecto-sp6_S_contig9.18219.1 ID=prot_Ecto-sp6_S_contig9.18219.1|Name=mRNA_Ecto-sp6_S_contig9.18219.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=342bp
MLSRVANAGARGALRARLPAASAGGRARVPPLIQPAFQSFHAGLPSRESA
VDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPLALFLT
VPALCREWYVMTEETMLMGCFFLFLGAAMDFGGEGVGKYFDDQTAEIKRA
QQSAEEAQIKRVTGDLATEKARLVEMQQMDAISKAIAYGNTRRNEAEAMA
APHTSRESTVKLLEALRGAKIKRVADLRNAEIATALTEVVAKVSADKKLK
KAALDNALMTLADPSKAAKVDPVSEVFAQYWKQKAIDTEKNKNKPVALTP
EQIAANEADIRSLCEKVGQDPAMLLASMPKTYTADTPTLFS*

mRNA from alignment at Ecto-sp6_S_contig9:1956982..1964480+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig9.18219.1 ID=mRNA_Ecto-sp6_S_contig9.18219.1|Name=mRNA_Ecto-sp6_S_contig9.18219.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7499bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1956982..1964480+ (Ectocarpus species6 EcLAC_371)
GGAGAGGTGTGCGCTAGAACGTGTGCACGGGCAGGAGCTGAGAAGAGAGG
AGGTAAGTACTGTGCAAGCGTTGAGCTTTTGCTTGTGTACGCTCGCTTCC
CTTCAAGACCGTACCGGTACTGATGAAAATGGTCCAGCGACATCTCTGGC
CGAACAACACACACACCCGTTCTTCTGCTGTCTGACAACGAGTCTCGGCT
GTGGTAGATAGCACCAAAGGAGAGTGACCTCTTGCACGTCCCGTGCAGGC
GGCCGAATTGGGTTGCCTTGACTTAGCAGGGCGCAAGGATTTGCTTGTTG
TCGGCGTGGAGAGGCTGCTTGGACGCACAAGTATCATTGCAAGGCACAAA
CTTTGCAAAAGTAGTTGTGCCCTGCTGCGTATCACGCCGAGAGTGGATGG
AACCTGCCTGCTGCACAGCTACTACAGCAGTAGGCGGCGTTGGGCGTTGT
GCAGCAGCCCGCACACAGCATGTCGATCATACCCACGAGAACAGCTGACG
CCAAGGTTCCCCAAGCATGCGTTAATCGCGGTGTTCCCTGTGGGTAAAAT
TGGTACATACTAGTTTTGCGCAATCGTGTACACATTGCTCTACTTTGCTC
CCAGGCTTGTACTTCGAAGTTTGGCGTAGAGGGGCTGCCCTCCGAGCGTT
TCAGCCTTTGCTGTGCCCACGACGCCCGTCTGCTGCAACGGCACACGTCG
CAAGGCGTGACTTCTTGCTCAGCAGCAAGTGCATCCCTTGTTTGCCTGTG
TTTGCAATGCTCCAGTAGCCTGGCAGCCGGTGGTTTTTGCAGATTTGTTT
TTGCGCCCCAAATTGTACTGGTTTTTGTGTGTGTGCCTTACCCAGCCGTA
CACACCAGAGTACAGAGAGCACTAGAGAGCACACGACAGGACCTGCAGTT
AATGTAAACTTTGCAACGGATGGGAAGGACTCTTACTGCTGTAACCCTTG
CCGCGTTGAAATAGAGATAGCGGGCGAGGGTAACAGGAGGAAAGATGGGT
GAAAAAAACTCCTTTGTTTTCCCGACCTCCTGTGTGCTCCCGGCTGGTGT
GTACTGGTATTTACCGAGTGCCATCTGTAGTTGCATGCATACTAGGCGCA
CAGCTGCGCCAAGCTGTCTGCTGGTTCCTTGTATGCAGCAAACACCCCAC
CTCAATGTTTTCAAGGTTAAGATGCGCGTTCGTGAAGCAATGTTTGTGTA
CCGCTGTGCGGCCTCCCATAGCAGTGGGCGGAGACTCCCGTATACGTCGA
CCTTCTTCGTTAACACCAGTTCCGATGCGTGAAATTAAGGGATGTCATGA
ACAAAGGCAGGCAGGCGGCCCTCGAGATGCCTGTCTCTTGTCTCTCACAC
ACCGTGGTAGGCGGACGGCTGAAGCGAAACGTTCGCCTGGCACACCACTA
GCCTTCCTAGTCATGTGTTGGGACGCACCCCTCTGCAGGCGTTGTTTTCG
GGCTCTCGCTCCGATTCTCACGACGTTCTTTGCAGGCTTCACCGGAAGTC
GCCTGATCCATCATTGGCACCCTTTGCGCTCGCATGGAAGACTCGCCATC
AGCCATGTGCGAACACCACCCCAGCTTTGCTTCCTGTCAGCCCAGACCAT
ACTTGGTAGACTGACTCGTCCCCTATCCCTGAACATTTGGCGCTCGAAAA
CCGTTTGCTGCAACGGCAGGAGGGTGTGTGTTGCAGCGACGATGCTTAGC
CGTGTTGCGAACGCCGGGGCGAGGGGAGCGCTGAGGGCGCGCTTGCCCGC
CGCTTCCGCTGGCGGACGCGCCCGGGTACCGCCGCTGATCCAGCCTGCCT
TCCAGAGCTTTCACGCGGGTGAGAGATTTATTTACACTGCTGTATCAATT
CATTGCTATTCTGTTCCGGGTTCTTTTCTGTGGAAGAGGTGGGGTGTGTT
CTTCGTAAATTAAGAGCAAAAAAACTTAAAAATATCCGTAATTTTGAGAG
CAACGCCCGCCAACGAATTGTGATACGGGTGTGTTGGTAGCTTTATTTGT
TGTGTATTTGGGGAAGACATGTCGGCACTGAAGGGGGGCAGTGTGAATGT
CGCTCACATGTTGGTGCGTTACGCGGCGGCGTGAGTGGAACTGAGAATAG
CGCGAACCAGCCGTGTCAGGGAGCGGATGGAAGGCTTTGGACGTGCCACT
GAACGTCGGCACTGGTTCGGTCGTCCCTACCGCAGACGGCATCACCCCGC
CCCCCGTCCCCCGACTCGGGGTTTATTTTCACCGAGCTCAGACCAGACGG
GGAGCCACCCCGAGCCGCTTCTTTCGCCAAAGCCGTTCTTGAGCACTCAG
CTAGCGCCCGGTTCTTTTGTTACATGTGTTGTGCTTGCGGGTGGTCCACG
GCTACTTCCCAGCCCTATGGTTCGTTTAGTTTGGCTAGGCCTGTCCGGAA
GGTCTTGTAGCTATTCACAGATGGTACCTATACACAGGTGGATATACCGC
TGCTGTGCTCGTATACGGTATGCACAAGGACGGTGTTTCTTTTTGCTCAT
CTAGCAACAGCAGTGTGGCAATTTTTTCCTTTGAGGATTTGATGTTAGGC
GACAGGACTACAGCAATAGGTACGCAGCAACGACAAATATTGTCGATAAC
TAGTATACAACAACATTGGTCGAAAACAGCAAACCCCTTTCTCCATTTTC
TCTTGTTCGTGCTCAAGCTTAACCTCGTGCCCCCCCCCCCCCAAACTTGT
TATGTCACCCGTTGCTTTGTCAAAAGGCCTTCCCAGCAGGGAATCGGCGG
TAGACAAGCCAGCGCCCTCGAGGGCAGAGGATATCGAGGCGAACAAGAAC
GCCAAGCTTTTCGGCGACAACCCTCGTCTTGAGGGGATGATCGAAGCGGT
ACGTTCTCCATCCCGTTTTTTTTCTTTCTTTCTGTTGGAATCCGTTGTCG
TACGTACATCTCCCGGGAGGTGAACAATGCCAAAGCGGTGGTCCTCCCGG
TGGTTGTGGTCGTTTTTTTTGTTGTAAAGCAGAGGTACATATGCATTAAC
TAAAATACAGCATGCGGTCATTGAAGGTACCTGTGTTGGGAATGGGCAGT
TGCGCCACCTCGTAAGACGTGGGTGGTCGACGGCCAAACGACTTGCAAGC
AACCAAAACGCGTTCGCCCCGCCTCCTCACGAACACCATGCGCCTGTGTC
CTCCTTTGCGTCGCGTGTGTGGAGTCCAGGGCAAGTTGGACAGCGCGAAG
CGGCTGGTTCCATTGGCTCTCTTCCTGACGGTCCCGGCCTTGTGCCGCGA
GTGGTACGTGATGACGGAGGAGACGATGCTCATGGGCTGCTTCTTCCTCT
TCCTTGGCGCCGCCATGGACTTCGGTGGGGAGGGTGTCGGAAAGTACTTC
GACGACCAGGTCGGTCGGTTGGTCGGTCGAAATCGTGGAAGGGGTTTCGA
ATTCGTGGGAGAAGTTTCGAGGTCGTGGGTTTGGCGCGTCGCCACTGGTG
CTCTCTGCTGAAATACCGGGTGTTGGAGAGTAGTCTGCGTGCTCCTACCT
GCGAGTTTTGACGGTGTGTGTCATTCTCCCCTCCGCTTGGGGCTGTGTTC
AAAGCTCGGTTGCTCCGCACGAGAACCGATGTTACTGCATTGCCGAGAAG
TCCTTTCGCCCGGCGCTGGCACCGTGCTAAAAGGGGATCTGAGATTCATA
TAGTGTTCGCTGTTTGTACATACACATGTTTCAGTACTATTTTGGGCGCA
CCAGCCGGAGTAACACGTCAGTTTTTTGTTTTTTCGCCCCCAAGTTCCTT
CTGCGATTCTTGCCCTCAGTGCACAAGTGCAACAGCAGTGCCAATGGTAG
AGTACGGTAGTCGTAAAGTATTTTTGGTCCAGTCCGTATATTTTTCCTTC
GTATTCCGCCCGCCCGGCCGTCATGGCCTTCTTCTCGCGTTGCTCTTCGC
AACCTTCGCCCCTACCTTTATCTCTAACCTTCTGTATCTCTTTTGGTCCC
CCCTGCCGGCAGACGGCTGAGATCAAGCGTGCGCAGCAGTCGGCCGAGGA
GGCGCAGATCAAGGTGTGTAATACACTATTATATTAAATTATAAAAGTAT
GGTATGTTTTAGTGTGCACCGCGTACATTGTACCGTTAATTTAGTGTGTT
AATTTAGTGTGGCTGTGTGATGATGATGTGTTGGCGTTCCGGGTGTTGCC
CATGAACCGCATGGTAATGCCACATGCTTGTGTGCGTGTTTTTTTCGCTT
GGCGGTCTGAACGAAAGAGCGAGCGACCGTAGGTGGAGAAAGAGAGAAAG
AAACGCCCTTATTGGAACACCTCGAAACAGACGCCCACAGCTGCTGTACA
TGTCTTGTGCGAATCGACACATCGATGGTCTCTCGATGCGTGAGACTGTC
CCGTTTTTTGTTTGTTCATTTCGTACGAAGACAACGCAAAGCTTGACGCC
ATCAGTGTCGACGGCTATCGGCGGCCCAGGATAAAACAAACTTTGCAATA
CGCTGCATATTATGTGTGGACTTGTTTGCTGTTTTTTTCGCGTTCTGGCT
CTGGATTACGCTGCATTCTCATGTGTAGGCTTGTTTGTGCTGATTTTTTG
TGTTGTTTCGTCTCTGGGTTGCTGACATCGCTCGTGCTTGCGCAGCGAGT
GACCGGGGACTTGGCGACCGAGAAGGCCCGCCTGGTGGAGATGCAGCAGA
TGGACGCCATCAGCAAGGCCATCGCGTACGGCAACACGCGCAGAAACGAA
GCGGAGGTGCGTGCGTCGTAGCACGGGCATGCCTGGTTGACCGCTTTTGC
TTGGTTTTATTTTACGGTACAGACCCGCTGTTATCGACAAAATTCTGTCG
AGAAAAGTTAGGTCAACTTCCGCCCGAGAAACGTGAAATGGAGATTAAGA
AATACAGCGTTTAATACAGGTAGCTCAGCGGCGGATACCTCCCACACGAT
ATCCGACGTGAGGATGGTCGTCATTTCTGGACGGTGGCGAATGTAAGAAA
CAGAGTCTTAGTTTGTTATCGCGCGCCGGTACGGCATTGTGTGTAAGTGA
CTACAAACCTCGGATAGTGTGATTTCGTGACGAGTGGGACGGCGGCACAC
GTGTGTTGTTTGCGGACGGTGTTGCTCGAAGGAAGTAGACGTGTCTCAAT
TGCTAGCCACGATGGGCGGGGTGCGGCATTTTCCCGCGACATGCGGACAA
CTGGGTGTTTCTGCACGTTCTGTAATACACGCGGTTACCTCAAGGTCAAA
CACGCGTCGATGTTGTCGTCTGCCGCGTGTTGTGCGCACCGCTGATGCTT
TGTGTGACCGGCTGTTGTTTCTTATCGTTTCGTCCACTATTATTTTGTCT
GCCGGCTTGGTGTGTTGCTCTCTCTCCTCTCGCGCGCGCGGGCGAGCAGG
CCATGGCGGCGCCACACACGAGCCGCGAGTCCACGGTGAAGTTGCTGGAG
GCCCTCCGGGGCGCCAAAATCAAGCGCGTGGCCGACCTCCGCAACGCCGA
GATCGCCACGGCGCTCACGGAGGTGGTGGCTAAGGTGCGCAGCAGCGATG
TACTACCGTACCGTGGTGGCATGTGGTACGGGAAAGTAAGGCAGGCTGTT
CCGCGTGAATGGTGGTGTGGAACGGGGCGCCTCTGGCGCGGAGTATGTAC
TGACGGCAAAGCGCTCGTTGCGCATCACCCCCGCCACGACCGGAAAAAAA
GTTTTGGGGACCGCTGCTGCTCTCTTGTCTGTCGTTTTAAGAGTATGGCA
CACGGGCATGCTCGTGGGATAACCACACGCCGTTTTGCGGCGCACCACGC
ATCACTAGAGTTTGCGCAACAATCATGTTGGTGATGCAGTCAATACTGCT
CGCGTGTGTATATGGTATGGATGTCTTGACAGTGAATAATCGCCCTAACC
TCTTGTACTGTGTTAACTTAAGATCGCCCATGATCGTCAAAGGTGCAAGA
ACGGGTTCCGTTATCGGAGGCTTACCCATTCTTGGATATTTCCCCATGAA
GGTGTAGCAACAGGCTCGAAGATGAAGTCATAGGCTTGCCCAAAAGAAGG
TACTCATGTTTACCAAGACGAGTAAGAGGTCCGACTCTTTCGGCTCTCGA
GAACAGTGATAATCGCCAATACTGTCGAAACTTTTCGATGCTTGTGACCC
AAAACCCCTTTGTCCCTCCTTTGTCCCTTGTGCAGGTGTCGGCCGACAAG
AAGCTCAAGAAGGCCGCCCTCGACAACGCCCTGATGACCCTCGCAGACCC
CAGCAAGGCGGCCAAGGTGGACCCCGTCAGCGAGGTGTTCGCGCAGTACT
GGAAGCAGAAGGCCATCGACACCGAGAAGAACAAGAACAAGGTACGGTTC
ATTGTGGTACGTTGTGGTACAGCAGTACATATGATGCATACCTTGGTAGT
GGATCCAACTATTTCACTCTCATTTGTTGCTCTTTGTTGTTTCACGAGTG
CTGCCTTTCTGGCTTGTGTTGTTTTGTTGGGGGCTTCTTTTTTTTTGTCT
TTGCAGGTATTCATCCAGCTGCTTCCGCGACAACTTCGTAGGTATTTTGC
GATTGTTTCGATGTTGTCAGTGTGTTTGTGGTTAGTGCGTCTATGCGCCT
ACTCGTGGGAATTTCGATGGCTGCTCACGATATACCACAGTATATGGGGA
AGCAGGAATAAGACCCAGCCTTGTCTGCGTCTCAAAATTCTTGGCGAAAC
AGCAGTCTTTACTGCCTGTTTGTTGTCGCTTTCTCTTCGAAGATGCCCAC
TTCGGACCTGCCGCAGGTTCATGTGTTGCGTGCGATACACACATTGGATT
CTATGATGGGTGTTGCATGGTTGTGGGGGAGTGTCGGCACGTGATTTTCG
GACGCTAACCCGAAGCTGCTTTCAAAAGTCTTCCCGTTACGCCCTTATTC
GATAGCTCTCGTTGATTTCTACACTTAACCCGGTGCCGCCTGGACTTCGC
CCTTCCGAATCCTCCCTTGCTGCTGCCGCGGCTGCTGTTGCTGCAGCCGG
TTGCCTTGACCCCGGAACAGATCGCCGCCAATGAGGCCGACATCCGGTCC
CTTTGCGAGAAGGTGGGCCAGGACCCTGCCATGCTGCTGGCCAGCATGCC
CAAGACCTACACGGCTGACACACCCACTCTCTTCAGCTAGACGACCACGA
CCACGACGACGGAGACGTCGACCTCTCGCAAAGTGGATGACGCTTTTGGT
CGGGTGGACGCGTTAGGTCGCTAGGAGCGCTTATCGCTCGGATGGGATTC
AGCACACGGTGATAATATTTTCCGGGGTGGTCCATCAGTTAGGAGGGGGA
ATGAGCGTTGCCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCA
TGTCTGATTGTGGTGGTGGGAGGCAGGCTCACCCTTTATTTTTCACGTCC
TTGTCGTGCGGCTGCTGTGCTAAAAACGTTGGGGCGGCAAAGTGCGGTTA
GCCCGGGCCGTTTGTCGGAGCTTCTTTACTCTTCGACGACAAGCGTAAAG
AGTTCGGGTGAACACGCTTTTTTTTGTTTGCCAAAATGCAAGCGGAGGC

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1956982..1964480+

>mRNA_Ecto-sp6_S_contig9.18219.1 ID=mRNA_Ecto-sp6_S_contig9.18219.1|Name=mRNA_Ecto-sp6_S_contig9.18219.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1026bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1956982..1964480+ (Ectocarpus species6 EcLAC_371)
ATGCTTAGCCGTGTTGCGAACGCCGGGGCGAGGGGAGCGCTGAGGGCGCG
CTTGCCCGCCGCTTCCGCTGGCGGACGCGCCCGGGTACCGCCGCTGATCC
AGCCTGCCTTCCAGAGCTTTCACGCGGGCCTTCCCAGCAGGGAATCGGCG
GTAGACAAGCCAGCGCCCTCGAGGGCAGAGGATATCGAGGCGAACAAGAA
CGCCAAGCTTTTCGGCGACAACCCTCGTCTTGAGGGGATGATCGAAGCGG
GCAAGTTGGACAGCGCGAAGCGGCTGGTTCCATTGGCTCTCTTCCTGACG
GTCCCGGCCTTGTGCCGCGAGTGGTACGTGATGACGGAGGAGACGATGCT
CATGGGCTGCTTCTTCCTCTTCCTTGGCGCCGCCATGGACTTCGGTGGGG
AGGGTGTCGGAAAGTACTTCGACGACCAGACGGCTGAGATCAAGCGTGCG
CAGCAGTCGGCCGAGGAGGCGCAGATCAAGCGAGTGACCGGGGACTTGGC
GACCGAGAAGGCCCGCCTGGTGGAGATGCAGCAGATGGACGCCATCAGCA
AGGCCATCGCGTACGGCAACACGCGCAGAAACGAAGCGGAGGCCATGGCG
GCGCCACACACGAGCCGCGAGTCCACGGTGAAGTTGCTGGAGGCCCTCCG
GGGCGCCAAAATCAAGCGCGTGGCCGACCTCCGCAACGCCGAGATCGCCA
CGGCGCTCACGGAGGTGGTGGCTAAGGTGTCGGCCGACAAGAAGCTCAAG
AAGGCCGCCCTCGACAACGCCCTGATGACCCTCGCAGACCCCAGCAAGGC
GGCCAAGGTGGACCCCGTCAGCGAGGTGTTCGCGCAGTACTGGAAGCAGA
AGGCCATCGACACCGAGAAGAACAAGAACAAGCCGGTTGCCTTGACCCCG
GAACAGATCGCCGCCAATGAGGCCGACATCCGGTCCCTTTGCGAGAAGGT
GGGCCAGGACCCTGCCATGCTGCTGGCCAGCATGCCCAAGACCTACACGG
CTGACACACCCACTCTCTTCAGCTAG