mRNA_Ecto-sp6_S_contig9.18210.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: A0A6H5J619_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J619_9PHAE) HSP 1 Score: 555 bits (1431), Expect = 1.130e-197 Identity = 293/316 (92.72%), Postives = 301/316 (95.25%), Query Frame = 3
Query: 21 MPTATLPSRLRLSTCLPAIAVAQLFLRPGVNGLAFNFPAACSSGARSSTASATGPLMASXXXXXXXXAQD--AMPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSERVDVPLYDKIAS 962
MP ATLPSRL LST LPAIAVAQLFLRPGVNGL +FPAACSSGARS+TA GP+M XXXXXXXXAQD AMPFPTGSKPVKE++SPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVP+LELGRPGS+DHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLD WVSSA MLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYND+EFFPRMRGLTIVQ LGIPPKLRAYLDAVSERVDVPLYDKIAS
Sbjct: 1 MPPATLPSRLCLSTFLPAIAVAQLFLRPGVNGLTLSFPAACSSGARSATAG--GPVMXXXXXXXXXXAQDKVAMPFPTGSKPVKEIESPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSDDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDSWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIAS 314
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: D7FTR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR2_ECTSI) HSP 1 Score: 488 bits (1257), Expect = 2.580e-172 Identity = 241/243 (99.18%), Postives = 242/243 (99.59%), Query Frame = 3
Query: 234 MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSERVDVPLYDKIAS 962
MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVP+LELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQ LGIPPKLRAYLDAVSERVDVPLYDKIAS
Sbjct: 1 MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIAS 243
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: A0A6V1VKR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VKR3_HETAK) HSP 1 Score: 228 bits (582), Expect = 5.040e-69 Identity = 109/226 (48.23%), Postives = 155/226 (68.58%), Query Frame = 3
Query: 285 PKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLA-EFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSERVDVPLYDKIA 959
P++++YDHCPYC R R++ GLK I H+L +++NDD +TP ++VGKKM P+ E HE+MAES+DI+ RLD DP++GPP+L PA DR D W++ +L RLV PR A +PL EF + ARE +V+ HPLP PS Y+ SP+ +EE+ +L +LE MI S A G LS +DVE F R+RGLT+V+ L PPK++AY++ +S++ VPLY ++A
Sbjct: 88 PRVFLYDHCPYCTRVRIILGLKNIKHELVWMANDDFDTPISLVGKKMAPIFEYNSE-ERGHEVMAESLDIIARLDSDPKWGPPLLRPASDRTDFRNWINDNKVLYNRLVNPRYARSPLIPEFTFQEAREVYVKRHPLPAPSDYDVLFAMSPQFVEEMNEKLLELEPMIFSAEHCTAGG-LSVDDVELFSRLRGLTVVRGLSFPPKVKAYIETMSQKTKVPLYYQLA 311
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: A0A5J4YKV5_PORPP (Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV5_PORPP) HSP 1 Score: 211 bits (536), Expect = 5.360e-63 Identity = 97/226 (42.92%), Postives = 149/226 (65.93%), Query Frame = 3
Query: 285 PKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELGRPGSEDHEIMAESMDIVKRLDLDPQFGPP-VLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSERVDVPLYDKIA 959
P+L++Y HCP+CVR + GLK I H+L +L+NDD+ TPTA+VGKK+VP+LE+GRPG HE+M ES+DI+KR+D DP FGP ++ PA R+D+D W+ + L RRL+ PR PL EF AR A++RNH +PEP Y+ N S +L+ ++ + KL+ ++ ++G +S +D+ F R+R L +++ PPK++AY+D + D+P + +A
Sbjct: 22 PRLYLYAHCPFCVRVQTALGLKNIKHELVFLANDDVATPTALVGKKVVPILEIGRPGQPGHELMNESLDIIKRIDEDPAFGPTNLIKPATGRQDIDAWIKESKELNRRLISPRYVRVPLPEFFFAEARAAYIRNHAIPEPGDYDTNFAMSAELLPQMNALMAKLDALVFCEQH-CSEGGVSMDDLVLFSRLRSLELLKGAVWPPKVKAYMDHFHQLTDIPSFAPMA 246
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: W7TQ45_9STRA (Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ45_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.350e-62 Identity = 112/224 (50.00%), Postives = 153/224 (68.30%), Query Frame = 3
Query: 282 RPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLPEPS-SYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSERVDVPLY 947
RP L+IYDHCP+CVR R++FGLK I H L +L NDD +TPTA+VGKKMVP+LE+ E +M ESMDIVK +D DP++GPPVL DR+D+ + S A L RR RPR A++ L EF T +AR AFVRNHP P Y NL+ + L+ +L L +L+ M+ S V +G +SY+DV+ F ++RGLT+V L +PP+L+AY++A E+ ++PLY
Sbjct: 52 RPNLYIYDHCPFCVRARIIFGLKRIPHQLIFLDNDDADTPTALVGKKMVPILEMIDAQGE-RVVMPESMDIVKLIDEDPRWGPPVLRRGSDREDIKAFFDSIADLSRRCTRPRFALSSVLPEFHTPAARAAFVRNHPFKSPPFDYTENLQ-NKSLVADLSARLRELDAMLFSDECVT-EGGVSYDDVDLFGKVRGLTVVAGLVLPPRLKAYVEAFGEKTEIPLY 272
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: A0A0G4EFM6_VITBC (GST N-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFM6_VITBC) HSP 1 Score: 211 bits (538), Expect = 3.960e-62 Identity = 113/231 (48.92%), Postives = 154/231 (66.67%), Query Frame = 3
Query: 285 PKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELG--RPGSEDHEIMAESMDIVKRLDLDPQFGP--PVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTS-VAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSERVDVPLYDKIA 959
P+L++YDHCP+CVR RM+FGLK I HDL Y++NDDIETPT ++GKKM P+LE+ RPG + IM ES+DIVK +D + G P+L P R DL W+ S A RRL RPR A + L EF SAR ++ HPL PSSYE N + S + I L L KL+GMI +P ++G +SY+D++ FPR+R L+IV+ L PP ++AY++ +S++ DV LY K+A
Sbjct: 108 PRLYVYDHCPFCVRARMIFGLKNIKHDLVYMANDDIETPTHLIGKKMAPILEVRGRRPG--EGLIMPESLDIVKYIDESEEIGAGLPLLKPFSGRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLENPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISEGGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVALYTKMA 336
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: A0A7S2XXQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ8_9STRA) HSP 1 Score: 207 bits (526), Expect = 5.380e-61 Identity = 102/215 (47.44%), Postives = 150/215 (69.77%), Query Frame = 3
Query: 285 PKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVD-RKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSE 926
P+L+IYDHCP+CVR RM+FGLK I H+L ++S+DD +TP +VGKK+ P+LE+ +D E+M ESMDIV R+D DP++G P+L + R+DL W+ L RR + R+ + PL EFQ RSARE F++ HPL EPS Y N S L+EE+ ++L +L+ MI SP DG LSY+D+ F ++R +T+++ + IPPK++AY++++SE
Sbjct: 74 PQLYIYDHCPFCVRARMIFGLKSIKHNLVFMSSDDWDTPEGLVGKKVAPILEIKHEDGKD-EVMPESMDIVWRIDNDPKYGQPLLKGKPELREDLAQWMKDTRDLFRRALHTRHVMVPLPEFQFRSAREVFIQRHPLAEPSDYNENYYNS-ALVEEMNQKLLELDAMIFSP-ECCTDGGLSYDDIAVFGKLRSVTLIRGIKIPPKMKAYIESMSE 285
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: A0A2V3IFN8_9FLOR (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN8_9FLOR) HSP 1 Score: 202 bits (513), Expect = 1.130e-59 Identity = 106/240 (44.17%), Postives = 152/240 (63.33%), Query Frame = 3
Query: 243 PTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELGRPGSEDHEIMAESMDIVKRLDLDPQFGPP-VLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSERVDVPLYDKIA 959
PT S P + + SP P L++YDHCP+CVR R + GLK I ++L +L+NDD+ TPTA+VG+K+VP+ + P ES+DI K +D DP+FG P +L A R D+ W+ AM MRRL R R + PL EF + ARE ++RNHPL +P YE N S + I +++ L +L MI+SP + G LSY+D+ FPR+R LTIV+ L +P +LR Y++ + ++P+YD A
Sbjct: 2 PTPSLPPRVVLSPLPTLYVYDHCPFCVRVRHLLGLKNIKYNLVFLANDDVTTPTALVGRKVVPIFQ---PQGTGGPAQPESLDICKHVDNDPRFGAPGLLKSATPRDDIAKWMDELAMPMRRLSRVRFSRAPLPEFVFQEARETYIRNHPLSDPGDYEDNFDRSTEYITQVQERLDELAEMIYSPEHCSPHG-LSYDDIVLFPRLRTLTIVKGLVLPKRLREYVEFQAAAAEIPVYDYCA 237
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: A0A7S0M661_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M661_9CRYP) HSP 1 Score: 201 bits (510), Expect = 1.100e-58 Identity = 112/252 (44.44%), Postives = 153/252 (60.71%), Query Frame = 3
Query: 258 PVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLP-----------------EPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSERVDVPLYDKIA 959
P + +P P+L++YDHCP+CVR R + G K I H++ +L+NDDIETPT +VGKK+VP+LE+ G E+M ESMDIVKR+D DP FGP +L PA RKDL W L R L RPR + L EF ++ R+A+VRNH LP + Y L+ +P L+ + +L GMI S ++G LSY+DV+ F R+R LTIV+ L +P +RAYL++++ DVPLYD IA
Sbjct: 32 PALVVGTPVPRLYVYDHCPFCVRVRFIMGFKNIKHNVVFLANDDIETPTKLVGKKVVPILEIPSYG----EVMKESMDIVKRIDEDPTFGPQLLKPASGRKDLSEWQDKHQDLFRLLQRPRYVSSGILPEFSQQAGRDAYVRNHALPPYAKEEWSDDKRLPRAMRYAKYAEALQQTPALLPAAAAAVQELGGMIASAQH-CSEGGLSYDDVDLFGRLRSLTIVRGLPLPDTVRAYLESMAAAADVPLYDPIA 278
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Match: A0A0G4H2N0_9ALVE (Uncharacterized protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H2N0_9ALVE) HSP 1 Score: 194 bits (494), Expect = 3.210e-56 Identity = 105/231 (45.45%), Postives = 147/231 (63.64%), Query Frame = 3
Query: 279 PRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPVLELGRPGSEDH-EIMAESMDIVKRLDLDPQFGP--PVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLA-EFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQDLGIPPKLRAYLDAVSERVDVPLYDKIA 959
P P+L++YDHCP+CVR R++FGLK I H+L +L+ND+++ PT +VGKKMVP+L P M ESMDIV+R+D D + G PVL ++ ++ RRL RPR A + L EF +AR + HPL PSSY+ N K S + I +LE+ L KL+ ++HS A +G SY DV+ FPR+RG TIV+ + P ++RAY+D SE+ D+PLYD+IA
Sbjct: 55 PLPQLYVYDHCPFCVRARIIFGLKKIKHELIWLANDEVDIPTRLVGKKMVPILVWTDPQDPQKITAMPESMDIVRRVDGDAKMGAGGPVLKETGASEEFISAMNEVTAASRRLTRPRFAGSALLPEFSFDAARRTYTERHPLDAPSSYDENFKRSSEYIPQLEKALQKLDPLLHSEEE-AVEGGPSYTDVDLFPRLRGCTIVKGVKWPQRVRAYVDKWSEKTDIPLYDRIA 284 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18210.1 >prot_Ecto-sp6_S_contig9.18210.1 ID=prot_Ecto-sp6_S_contig9.18210.1|Name=mRNA_Ecto-sp6_S_contig9.18210.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=315bp MPTATLPSRLRLSTCLPAIAVAQLFLRPGVNGLAFNFPAACSSGARSSTAback to top mRNA from alignment at Ecto-sp6_S_contig9:1892233..1897563- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18210.1 ID=mRNA_Ecto-sp6_S_contig9.18210.1|Name=mRNA_Ecto-sp6_S_contig9.18210.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5331bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1892233..1897563- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1892233..1897563- >mRNA_Ecto-sp6_S_contig9.18210.1 ID=mRNA_Ecto-sp6_S_contig9.18210.1|Name=mRNA_Ecto-sp6_S_contig9.18210.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=945bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1892233..1897563- (Ectocarpus species6 EcLAC_371)back to top |