mRNA_Ecto-sp6_S_contig9.18106.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: D8LLY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY8_ECTSI) HSP 1 Score: 451 bits (1160), Expect = 2.730e-155 Identity = 228/233 (97.85%), Postives = 230/233 (98.71%), Query Frame = 1
Query: 1 MATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQK 699
MATDSVELLALQRIDETCMQLQQQG+YLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGA VGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV +
Sbjct: 1 MATDSVELLALQRIDETCMQLQQQGDYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGATVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVTAR 233
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: A0A7S2CPG4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPG4_9STRA) HSP 1 Score: 393 bits (1009), Expect = 2.150e-131 Identity = 204/278 (73.38%), Postives = 236/278 (84.89%), Query Frame = 1
Query: 10 DSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKVREDLIRRGNRRPRGGACG 843
++ ELLALQRIDETC QLQ QGNYL+ALECMERGLVLRQHFFG+DS+EVW ACK+VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD+AGRAVT+NNLACYYRR+GKLH+ALQYL KALKIE K+ +V++PADT+LNTCAVLSQ+GRHQ ALEHAQ ALILLQEEL + D G++ P+ADRIAVLAIAYHN+GVE EFLKKF+ SLQSYRKGVEV++++LG +HA+TVTLRNS +AARRAI RD + R + R+ RGG G
Sbjct: 7 NNAELLALQRIDETCKQLQTQGNYLEALECMERGLVLRQHFFGADSDEVWRACKVVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIENKL-DQVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEELSRVLGPMAD-----GNEAPKADRIAVLAIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSERFLGPDHAITVTLRNSCIAARRAIMVRDPQARLQNLESKGRKGRGGGAG 278
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: A0A7S3YLC4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLC4_HETAK) HSP 1 Score: 391 bits (1004), Expect = 2.730e-130 Identity = 200/257 (77.82%), Postives = 221/257 (85.99%), Query Frame = 1
Query: 10 DSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARD 780
D+ ELLALQRIDETCMQLQQQGNYL+ALECMERGLVLRQHFFG++SEEVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD G+AVTYNNLACYYRR+GKLHSALQYL KALKIE+KM VE+PADTHLNTCAVLSQ+GRH ALEHAQS++ILLQEELF G D PR DR+AVL IAYHN+GVEQEFLKK+E S+ SYRKGVEV +++LG HA+TVTLRNS +AARRA+ ARD
Sbjct: 63 DNAELLALQRIDETCMQLQQQGNYLEALECMERGLVLRQHFFGAESEEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDQKGKAVTYNNLACYYRRQGKLHSALQYLQKALKIESKMKD-VENPADTHLNTCAVLSQLGRHTSALEHAQSSMILLQEELFQG------------DGDPRPDRVAVLGIAYHNIGVEQEFLKKYEQSIASYRKGVEVVERFLGPRHAITVTLRNSLVAARRAVGARD 306
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: A0A7S2RTK0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTK0_9STRA) HSP 1 Score: 388 bits (996), Expect = 2.910e-129 Identity = 200/260 (76.92%), Postives = 227/260 (87.31%), Query Frame = 1
Query: 13 SVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKVR 792
+ ELLALQRIDETC +LQQQGNYL+ALECMERGLVLRQHFFG++S+EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD AGRAVT+NNLACYYRR+GKLHSALQYL ALKIEAK+ +RV++PADT+LNTCAVLSQ+GRHQ ALEHAQ ALILLQEEL + D G + P+ADRIAVLAI+YHN+GVE EFLKKF+ SLQSYRKGVEVA+++LG HA+T+TLRNS +AA+RAI ARD VR
Sbjct: 16 NAELLALQRIDETCRKLQQQGNYLEALECMERGLVLRQHFFGAESDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHSALQYLQNALKIEAKL-ARVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEELSRVVGPMAD-----GKEAPKADRIAVLAISYHNVGVEYEFLKKFDQSLQSYRKGVEVAERFLGSEHAITITLRNSCIAAKRAIMARDPHVR 269
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: A0A836CET2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CET2_9STRA) HSP 1 Score: 383 bits (983), Expect = 1.290e-127 Identity = 197/240 (82.08%), Postives = 212/240 (88.33%), Query Frame = 1
Query: 4 ATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGG--AAVGDAGGEG------GDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQK 699
A DS ELLALQRIDETCMQLQQQGNYL+ALECMERGLVLRQHFFGSDS+EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD G+AVT NNLACYYRR+GKLH+ALQYL +ALKIEA++GSRV+ PADTHLNTCAVLSQ+GRHQGAL+HAQSALILLQEELFGGG A G+G PRADR+AVLAIAYHNMGVEQEFLK+F+HSLQSYRKGVEVAQK
Sbjct: 3 AADSAELLALQRIDETCMQLQQQGNYLEALECMERGLVLRQHFFGSDSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDAVGKAVTLNNLACYYRRQGKLHAALQYLQRALKIEARLGSRVQTPADTHLNTCAVLSQLGRHQGALDHAQSALILLQEELFGGGSRALPSSCAGDGELGLGLSQASPRADRVAVLAIAYHNMGVEQEFLKRFDHSLQSYRKGVEVAQK 242
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: A0A7S4A6K0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6K0_9STRA) HSP 1 Score: 377 bits (968), Expect = 2.930e-125 Identity = 199/276 (72.10%), Postives = 226/276 (81.88%), Query Frame = 1
Query: 10 DSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKVR-EDLIRRGNRRPRGG 834
D+ ELLALQRIDETC QQ G YL+ALECMERGLVLRQHFFG+ S+EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD AGRAVT+NNLACYYRR+GKLH+ALQYL KALKIE ++ S V++PADT+LN CAVLSQ+GRHQ ALEHAQ ALILLQEEL G PP+ADR+AVLAIAYHN+GVEQEFLKK SLQSYRKGVEVA++YLGG+HA+T TLRNS +AARR + ARD + R + + ++ RR GG
Sbjct: 15 DNAELLALQRIDETCTNFQQNGQYLEALECMERGLVLRQHFFGAGSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIEGRLES-VDNPADTYLNACAVLSQLGRHQSALEHAQQALILLQEELS-------SVLGSDNAGPPKADRVAVLAIAYHNVGVEQEFLKKHNQSLQSYRKGVEVAERYLGGDHAITSTLRNSCVAARRTMLARDPQARLQGMGKKAARRAPGG 282
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: A0A7S1XJL3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJL3_9STRA) HSP 1 Score: 378 bits (970), Expect = 6.340e-123 Identity = 197/269 (73.23%), Postives = 231/269 (85.87%), Query Frame = 1
Query: 4 ATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGG---GAAVGDAGGEGGDQPPRA--DRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKVRE 795
+ ++ ELLALQRIDETC+QLQQ GNYL+ALECMERGLVLRQHFFGSDS EVWSAC+ VGEMCNLLAMTYLQQ+D+ MVLELLKKAEILTERDD GRAVT+NN ACYYRR+GKLH+ALQ+L KAL+IE+++ V + ADT+LNTCAVLSQ+GRHQ ALEHAQ+ALILLQEELF G GA +G G E G PP DRIAVLAIAYHN+GVEQEFLKKFE SL SYRKG++VA+++LGG+HA+ +TLRNS AARRA +++D K R+
Sbjct: 112 SNETAELLALQRIDETCVQLQQSGNYLEALECMERGLVLRQHFFGSDSNEVWSACRTVGEMCNLLAMTYLQQQDYAMVLELLKKAEILTERDDKGRAVTFNNFACYYRRQGKLHAALQFLQKALRIESRLVD-VPNAADTYLNTCAVLSQLGRHQSALEHAQNALILLQEELFHGIEGGAGMG--GEEAGLAPPNPPKDRIAVLAIAYHNIGVEQEFLKKFEMSLTSYRKGIQVAERFLGGDHAIALTLRNSLTAARRAFASKDPKGRK 377
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: A0A7S3HH21_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH21_9STRA) HSP 1 Score: 362 bits (928), Expect = 5.970e-119 Identity = 183/254 (72.05%), Postives = 217/254 (85.43%), Query Frame = 1
Query: 13 SVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISA 774
+ E+LALQR+DET QLQ+QGNYL+ALECMERGLVLRQHFFG+DS EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTE+D+AGRA T+NNLACYYRR+GKLH+ALQYL KALKIE+ + + V++PADTH+N CAVLSQ+GRHQ AL+HAQ+A+ILLQEEL VG A PP+ADRIAVLAIAYHN+GVEQEFLK++E S+ SY+KGVEVA++YLG HA+ VTL NS +AA++ +A
Sbjct: 4 NAEVLALQRLDETSAQLQKQGNYLEALECMERGLVLRQHFFGADSPEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDEAGRAATFNNLACYYRRQGKLHAALQYLQKALKIESGL-TNVQNPADTHINACAVLSQLGRHQTALDHAQNAIILLQEELLSPPGVVGAA-------PPQADRIAVLAIAYHNIGVEQEFLKRYEQSVLSYKKGVEVAERYLGAKHAICVTLNNSLVAAKKQAAA 249
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: A0A024U4G6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4G6_9STRA) HSP 1 Score: 328 bits (840), Expect = 1.230e-105 Identity = 175/263 (66.54%), Postives = 200/263 (76.05%), Query Frame = 1
Query: 4 ATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKVR 792
A + EL ALQR+D C +LQQ+G Y +ALECME+GLVLRQHFFGSDS EV ACK VG+MCNLLAMTYLQQE+F +VLELLKKAEILTER AGRAVT NN ACYYRR+G LH AL +L +AL IEAK+ V + ADTHLN CAVLSQ+GRHQGALE AQ+ALILL EELF G D + DRIAVL IAYHN+GVEQEFLKK E S+ SYRKG EVA KYLG +H + +TLRNS + A RA+ AR S+ R
Sbjct: 27 AVEDQELYALQRLDTKCTELQQEGKYTEALECMEKGLVLRQHFFGSDSPEVRDACKTVGDMCNLLAMTYLQQENFPIVLELLKKAEILTERHPAGRAVTLNNFACYYRRQGNLHKALTHLTEALAIEAKL-EHVPNRADTHLNMCAVLSQLGRHQGALEQAQAALILLHEELFSAPTPGNQHGSPVADASVKLDRIAVLGIAYHNVGVEQEFLKKLELSIHSYRKGAEVAAKYLGESHGMVITLRNSLVTATRALEARASRGR 288
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Match: A0A482SDU3_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDU3_9ARCH) HSP 1 Score: 320 bits (821), Expect = 2.930e-103 Identity = 166/219 (75.80%), Postives = 185/219 (84.47%), Query Frame = 1
Query: 100 MERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGAAVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAA 756
MERGLVLRQH FG+DSEEVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTE+D AGRA TYNNLACYYRR+GKLHSALQYL KALKIE+K+ + V++PADTH+N CAVLSQ+GRHQ ALEHAQSALILLQEEL +VG A P+ADRIAVLAIAYHN+GVEQEFLK+FE S+ SY+KG EVA++YLG HA+T TL NS AA
Sbjct: 1 MERGLVLRQHMFGADSEEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDPAGRAATYNNLACYYRRQGKLHSALQYLQKALKIESKLPN-VQNPADTHINACAVLSQLGRHQTALEHAQSALILLQEELLSPPGSVGAAA-------PQADRIAVLAIAYHNIGVEQEFLKRFEQSILSYKKGAEVAERYLGTKHAITRTLNNSLAAA 211 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18106.1 >prot_Ecto-sp6_S_contig9.18106.1 ID=prot_Ecto-sp6_S_contig9.18106.1|Name=mRNA_Ecto-sp6_S_contig9.18106.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=525bp MATDSVELLALQRIDETCMQLQQQGNYLQALECMERGLVLRQHFFGSDSEback to top mRNA from alignment at Ecto-sp6_S_contig9:1017735..1021522+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18106.1 ID=mRNA_Ecto-sp6_S_contig9.18106.1|Name=mRNA_Ecto-sp6_S_contig9.18106.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3788bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1017735..1021522+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1017735..1021522+ >mRNA_Ecto-sp6_S_contig9.18106.1 ID=mRNA_Ecto-sp6_S_contig9.18106.1|Name=mRNA_Ecto-sp6_S_contig9.18106.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1575bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1017735..1021522+ (Ectocarpus species6 EcLAC_371)back to top |