mRNA_Ecto-sp6_S_contig83.17536.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI) HSP 1 Score: 824 bits (2129), Expect = 4.450e-297 Identity = 424/427 (99.30%), Postives = 427/427 (100.00%), Query Frame = 3
Query: 42 MSRCGVLAGVVGLAGLIEQAQAFVGSPVLRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLESLFKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR 1322
MSRCGVLAGVVGLAGLIEQAQAFVGSPVLRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPL+SLFKLNFKEALIGGAAIDAEGSPWPDST+ALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYAT+DIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR
Sbjct: 1 MSRCGVLAGVVGLAGLIEQAQAFVGSPVLRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATNDIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR 427
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA) HSP 1 Score: 599 bits (1544), Expect = 1.460e-208 Identity = 300/379 (79.16%), Postives = 332/379 (87.60%), Query Frame = 3
Query: 135 RAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLESLFKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSED-YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLV 1268
RA + S L M KDSY + LLPGDGIGPEIT ATV A++P LFK+ FKEALIGGAAIDA GSP+PD+T KASDS+LL+AIGGPKWDGNPRE RPETGLLAMR LGLFANLRPAKV+++L+DAS+LKPEIV+GVDIMVVRELTGDVYFGTPKGI+ SGER GYNNMIY+EHEVERIA+VA+DVA KRGKR+CSVDKANVLDVSQLWRDVVI++ +D YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+GNP GPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRP EAD++E AVD V+D+GYAT DI R+G VGCKEMG +V E L KL+
Sbjct: 28 RAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: A0A6V1T6U9_HETAK (3-isopropylmalate dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T6U9_HETAK) HSP 1 Score: 528 bits (1361), Expect = 6.990e-181 Identity = 278/407 (68.30%), Postives = 326/407 (80.10%), Query Frame = 3
Query: 57 VLAGVVGLAGLIEQAQAFVGSPVLRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLESL-FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLVAA 1274
++ ++ + +++ A AFVG+P++ AR S + M E KDSYD+ LL GDGIGPEIT ATV AL PLE L FK+NFKEALIGGAA+DA P+PD ++ K SDS+LL+ IGG KWD NPRELRPETGLL MR ++GLFANLRPAKV+ +L+ AS+LK E++EGVDIMVVRELTGDVYFGTPKG E G+RV YNNMIY E E+ RIAKVA+DVAMKRGK + S+DKANVLDVSQLWRDVVI+ S++YPEVEL H Y+DNAAMQLIRWPKQFD +V GN+FGDI+SDEASMLVGSLGMLPSAS+G+P GPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL R EA M+E AV+ V+D T DI G VGCK+MG EE+AKLVAA
Sbjct: 1 MIYSILFILAILQIANAFVGTPLMGARG-----SARTFMAVEKKDSYDITLLTGDGIGPEITQATVAALAPLEKLGFKMNFKEALIGGAALDAVNHPFPDESLEQCKGSDSVLLSCIGGYKWDKNPRELRPETGLLRMRKEMGLFANLRPAKVIPQLMGASTLKEEVLEGVDIMVVRELTGDVYFGTPKGT-ETRDGKRVAYNNMIYDEEEIRRIAKVAFDVAMKRGKNVYSIDKANVLDVSQLWRDVVIEESKNYPEVELNHMYIDNAAMQLIRWPKQFDTIVCGNLFGDIISDEASMLVGSLGMLPSASIGDPSGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSRAEEAQMLEDAVEQVLDI-CRTVDIAGGGLPTVGCKQMG----EEVAKLVAA 396
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: A0A7S0Z0Z5_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Z5_9CRYP) HSP 1 Score: 516 bits (1328), Expect = 2.800e-176 Identity = 264/378 (69.84%), Postives = 306/378 (80.95%), Query Frame = 3
Query: 129 RARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLESL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEEL 1256
R RA S S +SM + KD Y + LPGDGIGPEI A + A + + F++ +KEALIGGAA+DA P PD+T+ +ASDS LLAAIGGPKWD NPRELRPETGLL MR +LGLFANLRPA V+ +LVDAS+LKPE+++GVDIMVVRELTGDVYFG PKGI+E GER G+NNM Y E E+ RIAKVA+D+AMKRGK++CSVDKANVLDVSQLWRDVVI+ + YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+G+P GPGV+EPCHGSAPDIAG DKANPLA ILSAAMM RYDL RP AD +EAAV+ +D G T D+ E T +GCK+MG++V + +
Sbjct: 9 RVRAHSTS----VSMAVKKKDKYTITTLPGDGIGPEIIAGAITACDAVAKKQGFEIEWKEALIGGAALDAHNDPCPDATLDQMRASDSCLLAAIGGPKWDKNPRELRPETGLLKMRKELGLFANLRPATVLDQLVDASTLKPEVIKGVDIMVVRELTGDVYFGAPKGIEER-DGERFGFNNMCYKESEIRRIAKVAFDLAMKRGKKVCSVDKANVLDVSQLWRDVVIEEAAAYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVYEPCHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPEAADALEAAVNKALDDGLRTADLATENT--IGCKQMGEEVAKRV 379
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: A0A7S1G2F4_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G2F4_9STRA) HSP 1 Score: 510 bits (1313), Expect = 1.510e-173 Identity = 269/365 (73.70%), Postives = 301/365 (82.47%), Query Frame = 3
Query: 189 DSYDVMLLPGDGIGPEITAATVNALEPLESL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELP-SGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIK-MSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQ--REGTTAVGCKEMGDKVKEELAKL 1265
+SY V +L GDGIGPEI+ AT L L F+L K ALIGG AIDA SP+PD ++A ++SDS+LLA IGGPKWDGNPRELRPE+GLL MR ++GLFANLRPAKVM +LVDAS+LK EIVEGVD+MVVRELTGDVYFG PKGID P +GERVGYNNMIY E EV RIAKVA DVAMKRGK+LCSVDKANVLDVSQLWRDV I M +DYPEV+L+H YVDNAAMQLIRWPKQFD +VTGNIFGDILSDEASMLVGSLGMLPSAS+G +GPGVFEP HGSAPDIAGQD ANPLAMILSAAMMLRYDL RP EAD++E AV+ V+DKG T DI+ +G VGC EMGD V E +A +
Sbjct: 46 ESYSVTILEGDGIGPEISTATKKVLAALTKRCGFELELKPALIGGCAIDAANSPFPDESLAQCRSSDSVLLACIGGPKWDGNPRELRPESGLLKMRKEMGLFANLRPAKVMSQLVDASTLKREIVEGVDVMVVRELTGDVYFGAPKGIDTDPVTGERVGYNNMIYSESEVRRIAKVAGDVAMKRGKKLCSVDKANVLDVSQLWRDVTIDVMEKDYPEVDLSHMYVDNAAMQLIRWPKQFDTIVTGNIFGDILSDEASMLVGSLGMLPSASIGL-EGPGVFEPIHGSAPDIAGQDVANPLAMILSAAMMLRYDLARPEEADILERAVEAVLDKGIRTADIKFDGDGCRLVGCVEMGDTVAEIVATV 409
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: A0A7S2RSG3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSG3_9STRA) HSP 1 Score: 509 bits (1312), Expect = 3.270e-173 Identity = 259/367 (70.57%), Postives = 296/367 (80.65%), Query Frame = 3
Query: 186 KDSYDVMLLPGDGIGPEITAATVNALEPLESL---FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGT--TAVGCKEMGDKVKEELAKLVA 1271
K+ + LLPGDGIGPEIT ATV LE L +F EALIGGAA+DA P+P+ T+ ++SDS+LLA IGGPKWDGNPR+ RPETGLLAMR +GLFANLRPAKV+ +LVDAS+LK EIVEGVDIMVVRELTGDVYFG PKGID L GERVGYNNMIY E E++RIA+VAYDV++KR K+LCS+DKANVLDVSQLWRD V + ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G P PGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RP EAD++E AV+ V+D T DI +EG T VGC MGD V + +L A
Sbjct: 55 KEVSKITLLPGDGIGPEITVATVKVLETLAECKGDLSFDFNEALIGGAALDAVDDPFPEETLNSCQSSDSVLLACIGGPKWDGNPRDKRPETGLLAMRKNMGLFANLRPAKVLPQLVDASTLKREIVEGVDIMVVRELTGDVYFGEPKGIDTLEDGERVGYNNMIYKESEIDRIARVAYDVSLKRRKQLCSIDKANVLDVSQLWRDKVTSIGAEFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASLGEPSSPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLARPDEADILEKAVEKVLDSDVRTADIYQEGEGQTMVGCSAMGDAVCSAVKELFA 421
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: A0A7S0N7T0_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7T0_9CRYP) HSP 1 Score: 503 bits (1296), Expect = 1.990e-171 Identity = 264/378 (69.84%), Postives = 301/378 (79.63%), Query Frame = 3
Query: 129 RARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLESL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEEL 1256
R + FS TS + M KDSYDV LLPGDGIGPEI A V A + + + F +NFKEALIGGAA+DA P PD T+ KASDS+LLAAIGGPKWD NPRELRPETGLL MR LGLFANLRPA V+ +L+DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI GER G+NNM Y E EV RIAKVA+D+A KRG ++CSVDKANVLDVSQLWRDVVI+ YP+VEL+H YVDNAAMQLIR PKQFDV+VTGNIFGDILSDEASMLVGSLGMLPSAS+G+ GPGVFEPCHGSAPDIAGQDKANPLA ILSAAMM RYDL RP A+ +E AV+ V+D G T D+ RE T +GC++MG++V + +
Sbjct: 8 RGQRFSGLTSSR--MAVSRKDSYDVTLLPGDGIGPEIIKAAVVACKAVAAKQGFTINFKEALIGGAALDAHNDPLPDVTLKQMKASDSVLLAAIGGPKWDKNPRELRPETGLLRMRKALGLFANLRPATVLPQLIDASTLKPEVVAGVDIMVVRELTGDVYFGEPKGIT-TKDGERFGFNNMCYKESEVRRIAKVAFDIASKRGNKVCSVDKANVLDVSQLWRDVVIEEHAKYPKVELSHMYVDNAAMQLIRNPKQFDVIVTGNIFGDILSDEASMLVGSLGMLPSASVGDRSGPGVFEPCHGSAPDIAGQDKANPLATILSAAMMFRYDLDRPEAAEALERAVNKVLDDGLRTADLARENT--IGCRQMGEEVAKRV 380
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: A0A7S2V595_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V595_9STRA) HSP 1 Score: 503 bits (1296), Expect = 4.680e-171 Identity = 257/370 (69.46%), Postives = 302/370 (81.62%), Query Frame = 3
Query: 162 KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLESL-FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLV 1268
+++M K SYDV LL GDGIGPEIT A + A++PLE + F +NFK+ALIGG AID P+PD ++ + SDS+LLA IGG KWD NPR LRPETGLL MR ++ LFANLRPAKV+ +L+ AS+LKPE++EGVDIMVVRELTGDVYFG PKG G+RVGYNNMIY E E+ RIAKVA+DVAMKRGK++ S+DKANVLDVSQLWRDVV + S++YPEV+L H VDNAAMQLIRWPKQFD +V GN+FGDILSDEASMLVGSLGMLPSAS+GNP+ PGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RP AD++EAAV+ V+D Y T DI +G +GCK+MG EE+AKLV
Sbjct: 22 QITMAVGKKASYDVTLLKGDGIGPEITDAAIVAMKPLEQMGFTMNFKDALIGGIAIDEVNDPFPDESLKQCQESDSVLLACIGGYKWDKNPRHLRPETGLLKMRKEMDLFANLRPAKVLPQLLGASTLKPEVLEGVDIMVVRELTGDVYFGQPKGTMTDEDGQRVGYNNMIYSEGEITRIAKVAFDVAMKRGKKVHSIDKANVLDVSQLWRDVVTEESQNYPEVDLQHMLVDNAAMQLIRWPKQFDTVVCGNLFGDILSDEASMLVGSLGMLPSASIGNPENPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLARPEAADILEAAVEEVLDT-YRTGDIAADGFELIGCKKMG----EEVAKLV 386
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: A0A7S0F2Y7_9CRYP (3-isopropylmalate dehydrogenase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0F2Y7_9CRYP) HSP 1 Score: 503 bits (1295), Expect = 7.380e-171 Identity = 268/387 (69.25%), Postives = 300/387 (77.52%), Query Frame = 3
Query: 126 LRARAFSPSTSH------------KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLESL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKV 1244
L A AFSP +S LSM + KDSY V LPGDGIGPEI AATV + + + FK+ FKEALIGGAA+DA P+PD T+ K+SDS+LLAAIGGPKWD NPR+ RPETGLL MR LGLFANLRPA V+ +L DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI GER GYNNM Y E EV RIAKVA+D+A KRGKR+CSVDKANVLDVSQLWRDVVI+ +DYP+VEL+H YVDNAAMQLIR PKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+G+P GPGVFEP HGSAPDIAG DKANPLA ILSAAMM RYDL RP A +E AV+ V+D G T D+ + VGCK+MGD+V
Sbjct: 22 LVAEAFSPLSSFGRVQRRQASYVSSLSMAVKKKDSYFVTTLPGDGIGPEIMAATVKVCQAVAAKQGFKMEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPKGIT-TKDGERFGYNNMCYKESEVRRIAKVAFDIARKRGKRVCSVDKANVLDVSQLWRDVVIETHKDYPDVELSHMYVDNAAMQLIRNPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVFEPIHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPDAAQAIEDAVNKVLDDGVRTGDLGGK----VGCKQMGDEV 403
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Match: A0A7S2P3R3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3R3_9STRA) HSP 1 Score: 500 bits (1287), Expect = 6.530e-170 Identity = 258/361 (71.47%), Postives = 299/361 (82.83%), Query Frame = 3
Query: 177 TEAKDSYDVMLLPGDGIGPEITAATVNALEPLESLF--KLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSE-DYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTA--VGCKEMGDKV 1244
T KDSYD+ LLPGDGIGPEIT AT L+ L F KLN KEALIGGAAIDA+ P+PD ++ + DS+LLA IGG KWD NPRELRPETGLL MR ++GLFANLRPA V+ +L+DAS+LK E+VEGVD+MVVRELTGDVYFGTPKGID + GERVGYNNMIY E E++RIA+VA DVA KRG +LCSVDKANVLDVSQLWR+VV + E ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G DGPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RP EA ++E AV+ +++G T DI++EG +GC EMG++V
Sbjct: 14 TSKKDSYDITLLPGDGIGPEITTATTKVLQTLTERFNFKLNLKEALIGGAAIDAKNDPFPDESLQQCLSGDSVLLACIGGYKWDNNPRELRPETGLLKMRKEMGLFANLRPAVVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDVV-DGERVGYNNMIYSESEIKRIARVAGDVASKRGGKLCSVDKANVLDVSQLWREVVTDICEKEFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-DGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLDRPHEALVLEKAVEEALEQGLRTADIKQEGDGCKLIGCVEMGEQV 372 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig83.17536.1 >prot_Ecto-sp6_S_contig83.17536.1 ID=prot_Ecto-sp6_S_contig83.17536.1|Name=mRNA_Ecto-sp6_S_contig83.17536.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=441bp MPSPPVCDTQRCTMSRCGVLAGVVGLAGLIEQAQAFVGSPVLRARAFSPSback to top mRNA from alignment at Ecto-sp6_S_contig83:482235..489618+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig83.17536.1 ID=mRNA_Ecto-sp6_S_contig83.17536.1|Name=mRNA_Ecto-sp6_S_contig83.17536.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7384bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:482235..489618+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig83:482235..489618+ >mRNA_Ecto-sp6_S_contig83.17536.1 ID=mRNA_Ecto-sp6_S_contig83.17536.1|Name=mRNA_Ecto-sp6_S_contig83.17536.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1323bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:482235..489618+ (Ectocarpus species6 EcLAC_371)back to top |