mRNA_Ecto-sp6_S_contig11.1261.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: D8LAW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW0_ECTSI) HSP 1 Score: 513 bits (1321), Expect = 6.700e-179 Identity = 259/273 (94.87%), Postives = 262/273 (95.97%), Query Frame = 1
Query: 547 MITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKPGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWSQEDSMVNPAGKERAVDDKAADRGKGVPAVVPVTAENCEQFALSEGVDLFKAKCDLTNAR 1365
MITPLEISRERLEPA+LRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEK GVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYW+QEDS+VNPAGKERAVDDKAA VVP T ENCEQFALSEGVDLFKAKCDLTNAR
Sbjct: 1 MITPLEISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWNQEDSIVNPAGKERAVDDKAA--------VVPATVENCEQFALSEGVDLFKAKCDLTNAR 265
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: A0A7S2RBK6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBK6_9STRA) HSP 1 Score: 211 bits (536), Expect = 9.590e-60 Identity = 121/379 (31.93%), Postives = 193/379 (50.92%), Query Frame = 1
Query: 397 DLCLGMAVGISPAQLVTFAASFREFAPSADLFMFFEAPTSERFNDIIDTFMITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTF--TDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKPGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWSQEDSMVNPAGKERAVDDKAADRGKGVPAVVPVTAENCEQFALSEGVDLFKAKCDLTNARVGSLGDCCAACGGRAGCQAFSFDKSFGLCYMKNCDRPNTPGPSATAWSITSGIR 1527
DL +G+ GISP L F S R +PSA L ++ ++P E I++ + +T LE S +EPA LRKYHPS+ RW +I R+L Y RV++ D FQA+PF+ D G + F + + IG+ + +QDC G +VL ++ + I SGVS+G+++ V+ Y +M + + F CE+ GVD G+H+ L+++ + + F QS+G + ++ A + + G +V N + V +V++Y L + F +++W ++ E C + + EGVDLFK +CDLT G+CCA C GC+AFS S C++KNC+ T P + SG +
Sbjct: 32 DLVVGLGTGISPENLAVFCGSLRAVSPSAALVLYLDSPLPELHRRIVERYDVTALEFSVSLIEPAFLRKYHPSNYRWPLIHRYLKDHANAYRRVVLADVRDTMFQADPFERF-DRGFFAFHGVESRTIGQCGWNGGWVQDCFGRTVLQQVQSEAIICSGVSMGSTDEVLAYLGEMQRTMETKEFATCERNGVDQGVHNVLVHTKRIPNLKVFSQSNGWVANLQAQRARIHGGQVFNRQDELVAVVHQYDRRRDLQSAYFDTFVFWPRKTD-----------------------------GELCAGYTVEEGVDLFKGRCDLTVTGSQGTGECCAKCTATPGCKAFSIAGS--QCFLKNCNTVTTRSPMP---GVASGFK 375
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: L1IE52_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IE52_GUITC) HSP 1 Score: 138 bits (347), Expect = 2.570e-34 Identity = 72/212 (33.96%), Postives = 123/212 (58.02%), Query Frame = 1
Query: 550 ITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKPGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSR--VTNLEGREVPIVYRYVENAILTAEVFRRYI 1179
+T L ++R L+PA+L KYHPS+ RW+++Q FL G + +VL+ D FQ++PF I+ + G++TF++ I ++ I+ C G + +LA K I SG+SLGT+ V Y M++ ++ F ACE+ GVD G+H+ L++ G + G+ DQ +GP+ + + K MS + V N IV++Y + + + FR+++
Sbjct: 1 VTVLPVNRVSLDPATLGKYHPSTTRWVLMQSFLKRVGHNFNKVLLADVRDTGFQSDPFSIVSEAGLWTFSESVNIMGDDWNTGWIRSCFGQGKVDELASKEIICSGISLGTTMHVQSYLDAMAKEINGPNFAACERNGVDQGIHNVLVHQGSLPGLHVLDQYNGPVAHLQS-KVGMSFNNDVVINSRNERAVIVHQYDRDVFVMRKFFRQFV 211
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: L1IEM2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IEM2_GUITC) HSP 1 Score: 144 bits (362), Expect = 1.360e-33 Identity = 103/387 (26.61%), Postives = 178/387 (45.99%), Query Frame = 1
Query: 397 DLCLGMAVGISPAQLVTFAASFREFAPSADLFMFFEAPTSERFNDIIDTFMITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAG-FQACEKPGVDAGLHDYLLYS-GGVQGVLRFDQSSGPMTDVP---AGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWSQEDSMVNPAGKERAVDDKAADRGKGVPAVVPVTAENCEQFALSEGVDLFKAKCDLTNA---RVGSLGDCCAACGGRAGCQAFS-FDKSFGLCYMKNCDRPNTPGPSATAWSITSGIRL 1530
DL LG+ + F S R F+PS+D+ +F A T R + ++ + ++ + E + A++R + + RW++ +RFLD+ G Y RVL+ D Q+ FQ+NPFD++ PG+Y F++ + + + S I+ C +SVL L DK ++ G +G+ + V+ Y + M+ + S C GVD G+H+ + Y+ ++ +Q++G + ++ A ++ V N G +V RY + +F Y+ W D +G G C ++ L V+LFK D ++ RV S CC C C F+ FD++ C+MK+ R P TSG ++
Sbjct: 179 DLALGLVDKLHEEYTSIFVLSLRRFSPSSDIVLFLRASTP-RLDALLKNHGVISVKYAEEDISQAAMRNHSSLTYRWLVFERFLDLHGKNYRRVLLADVVQVAFQSNPFDVMKKPGLYAFSESISLSQDEWTSNWIRACFESSVLTPLPDKETLNVGYVMGSIDRVLPYVKVMAATIRSVTRADGCRGEGVDQGVHNVVAYTDASFSDLVVQNQNNGAVGELQSPFAMTYNAGVKAVINGMGVAAAVVLRYYHVPEVMKLLFNSYVVW----------------DVHNVSKGTG----------GCWRYMLMTHVELFKGHGDFADSSVERVASPLGCCEICDRNQQCNGFTHFDQT---CWMKSISRSPKPEEGFPVPESTSGWKI 535
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: A0A7S4P7D4_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P7D4_GUITH) HSP 1 Score: 140 bits (353), Expect = 6.370e-33 Identity = 102/385 (26.49%), Postives = 177/385 (45.97%), Query Frame = 1
Query: 388 GAGDLCLGMAVGISPAQLVTFAASFREFAPSADLFMF---FEAPTSERFNDIIDTFMITPLEISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPG----VYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKPGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYI--YWSQEDSMVNPAGKERAVDDKAADRGKGVPAVVPVTAENCEQFALSEGVDLFKAKCDLTN-ARVGSLGDCCAACGGRAGCQAFSFDKS-FGLCYMKNCDRPNT---PGPSAT 1500
G+ D+ +G+A I QL F S R ++ D+ +F E + + F+I + S +E RK+HPS+ RW +I +F + +Y+RVL+ D FQ +PF+I+ D +T D+ IG+ + ++DC G + ++L+ KP I SG+S+GT + V Y + MSE + F ACE+ GVD G+H+ L+++ + + Q G + ++ A +V N+ +V++Y + L + Y+ W +E +G+GV CE + + + +LFK D+ + DCC C A C++F+ G C+ K+ +P++ P P T
Sbjct: 89 GSTDIAIGIAHKIHAVQLAVFVKSLRAYS-KCDIVLFVDELEKEVEKIGREAGVNFII--FKTSESMVERT--RKFHPSTIRWPLIHQFFSLHPDKYKRVLMADVRDTAFQGDPFEILKDSSSSFLAFTGVQDRTIGQCGWNGGWVRDCFGPEMFSRLSSKPIICSGISMGTMDAVKSYLQAMSEHIMKQEFAACERNGVDQGVHNVLVHTDKIPHLRVNRQDDGLVANMQAHVMKFRSGKVYNVNNELARVVHQYDRDLELQRSLLDSYVDFEWHKES------------------KGEGV----------CEGYTIRDNYELFKGLGDIKEEGNYPTFQDCCRQCNKLANCKSFTHKAGGTGTCFFKSASQPSSDPIPAPFLT 440
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: A0A7S3HHB0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHB0_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.860e-14 Identity = 69/247 (27.94%), Postives = 111/247 (44.94%), Query Frame = 1
Query: 802 IQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLS-----SAGFQACEKPGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGK----FDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWSQEDSMVNPAGKERAVDDKAADRGKGVPAVVPVTAENCEQFALSEGVDLFKAKCDLTNARVGSLGDCCAACGGRAG----------------CQAFSFDKSFGLCYMKNC 1467
I+DC G V + P I SGVS+GT + V +Y +MS VL S+ F ACE+ GVD G+H+ L+++G + V + P+ ++ A S +T+ G + +V++Y + L + +Y+ W VN + D A+ K C F +S DLF+ KC+L + RV S CC C + C +F++ + G+CY+K+C
Sbjct: 30 IKDCFGEKVFESVKANPIICSGVSMGTIDGVKDYVAKMSSVLLGQDSLSSSFPACERNGVDQGVHNVLVHTGALSNVTVRYEYDFPVVNLQAYPQLQVTPADPSVLTSEAGVKYALVHQYDRLSPLQTALAGQYVDW------VN-------LQDPQAEWEK---------EPTCAMFTVSYEKDLFRGKCELGSHRVMSAASCCQVCQSKKKPLSGSVNTGDYPPETVCSSFTYLE--GVCYLKSC 252
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: A0A7W1CQ63_9BACT (Uncharacterized protein n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7W1CQ63_9BACT) HSP 1 Score: 72.8 bits (177), Expect = 2.160e-10 Identity = 52/197 (26.40%), Postives = 90/197 (45.69%), Query Frame = 1
Query: 565 ISRERLEPASLRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKL--IGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKPGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTD---VPAGK--FDMSGSRVTNLEGREVPIVYRY 1134
+ R E + + +H R ++ FL +Y+RVL+ D +FFQA+PF PG++ F +D+ +G H I G L K D+ +G G +++Y QM + + ++ D G+H+YL+Y+G V D P+ VP K FD + + + +G VP++++Y
Sbjct: 96 LPRASKELLAHKVFHLFYRRHLLYLAFLREYAADYDRVLLTDCRDVFFQADPFGWEQSPGLHLFLEDESNKLGTCGHHIRWIMSAFGPETLQKWKDETVSCAGTVFGDVQAILDYLEQMFS--QTMRVKTLKESDGDQGIHNYLIYAGAFPEVTIHDNRRKPVMTLGLVPPDKLQFDQN-DYLLDEDGAIVPVLHQY 289
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: A0A0A2VBV4_9BACI (Uncharacterized protein n=1 Tax=Pontibacillus chungwhensis BH030062 TaxID=1385513 RepID=A0A0A2VBV4_9BACI) HSP 1 Score: 71.6 bits (174), Expect = 3.020e-10 Identity = 65/224 (29.02%), Postives = 98/224 (43.75%), Query Frame = 1
Query: 397 DLCLGMAVGISPAQLVTFAASFREFAPSADLFMFFEAPTSERFNDIIDTFMITPLEISRERLEPASLRK-YHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTK-IQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKPGV--DAGLHDYLLYSGGVQGVLRFDQSSGPMTDV 1056
+L +G+ S + F S + S ++ MFFE E N T + IS E L K + R + FL G Y +VL+ D +FFQ NPFD G T ++L K + +TK I G + +L ++ I +G + G + L++ Y +M L FQ P + D +H+YL++SG VQ V D GP+ V
Sbjct: 8 NLIMGLISHYSWEDIKPFFLSLEKVNYSGEVVMFFEHINEETQN----TLKNLNVNISLIPYERIGLEKTFDIIDYRHYLYLNFLRAHGHRYNKVLLTDVRDVFFQLNPFDAGWSDGSITVAKEELKIKDEYWNTKWILTKFGNHIYQQLENETIICAGTTYGPTELILAYLEEMVYHL----FQLHYFPQIINDQAVHNYLIHSGKVQPVAYSDNEKGPIMTV 223
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: A0A482STP9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STP9_9ARCH) HSP 1 Score: 62.8 bits (151), Expect = 1.150e-7 Identity = 42/157 (26.75%), Postives = 82/157 (52.23%), Query Frame = 1
Query: 703 FFQANPFDIIGDP----GVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAG--------FQACEKPGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGS-RVTNLEGREVPIVYRY 1134
+FQ +PF I V+T + I + +S ++DC +VL ++ + I SGVS+GT+++V++Y M +L F CE+ GVD G+H+ L+++ + + ++D S+G + ++ A ++ +V N +G +V++Y
Sbjct: 5 YFQTDPFIFINPNVPSFSVFTGVESMSIKQCGWNSGWVKDCFAGNVLDQIGGENIICSGVSVGTTDIVLKYIEMMRNILMGLHKAYGLDNKFPTCERNGVDQGVHNVLVHTRKIPKMKKWD-STGFVANMQAKLATVTKDFQVLNSKGERYAVVHQY 160
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Match: A0A7S2YCJ7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YCJ7_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 4.980e-7 Identity = 57/212 (26.89%), Postives = 89/212 (41.98%), Query Frame = 1
Query: 676 VLIVDAGQIFFQANPFDII-------GDPGVYTFTDDKL----IGKSQQHSTK-IQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKPGVDAGLHDYLLYSGG------VQGVLRFDQSSGPMTDVPA---------------GKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRR-----YIYWSQED 1197
+L+VDA FQANPF+ + G G+ F + + IGKS Q++ + I + G V + DKP I SG ++G + + Y R M G G D G H+ L YS + ++ FDQ +G + ++ A K D G V N +G P+V+++ + L R+ Y W Q +
Sbjct: 28 ILLVDARDTIFQANPFEHLPRNTDPSGKSGLLYFFGESIEATNIGKSAQYNYRWILNAYGYEVATAVQDKPIICSGATMGENIAIETYLRAMVAEADETGTVVM---GSDQGFHNRLYYSNKLASADRIHAIVVFDQGTGIVNNLAALRSQPLEEWGNGRLVEKTDSGGFVVKNWDGSISPVVHQFDRHKELARYFSRKKGKEDYRKWKQNN 236 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig11.1261.1 >prot_Ecto-sp6_S_contig11.1261.1 ID=prot_Ecto-sp6_S_contig11.1261.1|Name=mRNA_Ecto-sp6_S_contig11.1261.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=516bp MAVLKAHRVHKTHNLLGRAGSGLGRRRGSGLDRYNSSDSLKHGEYNRACRback to top mRNA from alignment at Ecto-sp6_S_contig11:856052..862699+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig11.1261.1 ID=mRNA_Ecto-sp6_S_contig11.1261.1|Name=mRNA_Ecto-sp6_S_contig11.1261.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6648bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:856052..862699+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:856052..862699+ >mRNA_Ecto-sp6_S_contig11.1261.1 ID=mRNA_Ecto-sp6_S_contig11.1261.1|Name=mRNA_Ecto-sp6_S_contig11.1261.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1548bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:856052..862699+ (Ectocarpus species6 EcLAC_371)back to top |