mRNA_Ecto-sp6_S_contig105.1023.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: A0A6H5K2J7_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J7_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.270e-56 Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 3
Query: 9 GDGYCEQQNNNAECGYDGGDCCECTCQTQGDDDYYSWGCNKGYMACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCGY 275
GDG+C Q NNNAECGYDGGDCCECTCQTQ DDDYYSWGCNK YMACIDPDASCVDDDDVTAEMVENCEWV GIGDGYC+DGNNK +C +
Sbjct: 37 GDGFCTQHNNNAECGYDGGDCCECTCQTQSDDDYYSWGCNKDYMACIDPDASCVDDDDVTAEMVENCEWVAGIGDGYCHDGNNKAECDF 125
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: D7G6M7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M7_ECTSI) HSP 1 Score: 151 bits (381), Expect = 1.160e-44 Identity = 68/89 (76.40%), Postives = 71/89 (79.78%), Query Frame = 3
Query: 6 YGDGYCEQQNNNAECGYDGGDCCECTCQTQGDDDYYSWGCNKGYMACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCG 272
YGDGYC NNNAECGYDGGDCCECTCQTQ DDDYYS C+K YMACIDPDASCVDDDDVT E+V NC G IGDG C GNN +CG
Sbjct: 36 YGDGYCTPPNNNAECGYDGGDCCECTCQTQSDDDYYSGRCDKEYMACIDPDASCVDDDDVTIELVANCSHAGAIGDGICEKGNNNPECG 124
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 150 bits (378), Expect = 8.060e-42 Identity = 66/101 (65.35%), Postives = 78/101 (77.23%), Query Frame = 3
Query: 9 GDGYCEQQNNNAECGYDGGDCCECTCQTQGDDDYYSWGCNKGYMACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCGYDGGDCCECTCVV 311
G+GYC+ NN+ EC YDGGDCCECTC++ DD Y + C G ACIDP+A CVDDDD TAE E+C WV IGDG C+D NNKE+CG+DGGDCC+CTCVV
Sbjct: 243 GNGYCDDSNNSPECAYDGGDCCECTCESH--DDGYEYYCEPGSFACIDPEAECVDDDDNTAEQYEHCGWVTRIGDGMCDDENNKEECGFDGGDCCDCTCVV 341
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 154 bits (390), Expect = 1.410e-41 Identity = 70/101 (69.31%), Postives = 79/101 (78.22%), Query Frame = 3
Query: 3 GYGDGYCEQQNNNAECGYDGGDCCECTCQTQGDDDYYSWGCNKGYMACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCGYDGGDCCECTC 305
G GDG+C+Q NNN CGYDGGDCCECTC + DDD W C + Y ACIDPDA CVDDDD+TA MVE C WV G+GDG+C++ NN E CGYDGGDCCECTC
Sbjct: 77 GLGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDD-DWAC-RNYNACIDPDAPCVDDDDITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTC 175
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 145 bits (367), Expect = 5.740e-41 Identity = 67/100 (67.00%), Postives = 78/100 (78.00%), Query Frame = 3
Query: 6 YGDGYCEQQNNNAECGYDGGDCCECTCQTQGDDDYYSWGCNKGYMACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCGYDGGDCCECTC 305
+GDG+C+Q+NNN CGYDGGDCCECTC DDDY S N ACIDP A CVDDDDVT +MVENC +VG +G+G+C++ NN E CGYDGGDCCECTC
Sbjct: 61 FGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDY-SCAANS---ACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTC 156
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 147 bits (370), Expect = 2.770e-39 Identity = 72/105 (68.57%), Postives = 82/105 (78.10%), Query Frame = 3
Query: 3 GYGDGYCEQQNNNAECGYDGGDCCECTCQTQ-GDDDYYSWGCNK-GY-MACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCGYDGGDCCECTCV 308
G+GDGYC+ QNNNAECGYDGGDCCECTCQ GDDD W C+K GY ACIDPDA CVDDDD+T E+ +NC +G+GYC++ NN E CGYD GDCCECTCV
Sbjct: 28 GFGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDD--EWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCV-TSDLGNGYCDEDNNNEICGYDFGDCCECTCV 129
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 145 bits (366), Expect = 2.020e-38 Identity = 70/110 (63.64%), Postives = 81/110 (73.64%), Query Frame = 3
Query: 9 GDGYCEQQNNNAECGYDGGDCCECTC-------QTQGDDDYYSWGCNKGY--MACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCGYDGGDCCECTCVV 311
GDGYC+Q NNN CGYDGGDCCECTC Q+ DDD W C+ G ACIDP A CV+DDD+TA+MVENC +V G+GDG+C++ NN E CGYDGGDCCECTCV
Sbjct: 60 GDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDD-DWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVA 168
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: D7FI91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI91_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.350e-37 Identity = 59/75 (78.67%), Postives = 64/75 (85.33%), Query Frame = 3
Query: 51 GYDGGDCCECTCQTQGDDD-YYSWGCNKGYMACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCG 272
GYDGGDCCECTCQTQ DDD YY C+ YMAC+DPDASCVDDDDVT EMVENCE+V IGDGYC+DGNNK +CG
Sbjct: 29 GYDGGDCCECTCQTQSDDDFYYPENCDADYMACVDPDASCVDDDDVTVEMVENCEYVHDIGDGYCDDGNNKAECG 103
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 138 bits (347), Expect = 2.040e-36 Identity = 61/101 (60.40%), Postives = 72/101 (71.29%), Query Frame = 3
Query: 3 GYGDGYCEQQNNNAECGYDGGDCCECTCQTQGDDDYYSWGCNKGYMACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCGYDGGDCCECTC 305
G GDG+C++ NNN C YDGGDCCECTC+ DDD W C AC+DP+A CVDDD VT +M+ENC W GIGDGYC++ N +C YDGGDCC CTC
Sbjct: 62 GIGDGWCDEDNNNELCAYDGGDCCECTCEGSEDDD---WHCRN--FACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTC 157
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 137 bits (344), Expect = 8.670e-36 Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = 3
Query: 9 GDGYCEQQNNNAECGYDGGDCCECTCQTQGD---DDYYSWGCNKGYMACIDPDASCVDDDDVTAEMVENCEWVGGIGDGYCNDGNNKEQCGYDGGDCCECTC 305
GDG+C++ NNN CGYDGGDCCECTC+ + DD + + C + +CIDP+A+CV DDD+T +M ENC +V GIG+G+C+ NNKE+CGYDGGDCC CTC
Sbjct: 100 GDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCRE--FSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC 199 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig105.1023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig105.1023.1 >prot_Ecto-sp6_S_contig105.1023.1 ID=prot_Ecto-sp6_S_contig105.1023.1|Name=mRNA_Ecto-sp6_S_contig105.1023.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=104bp VATETGTASSKTTTQNAATTAATAASALARLKAMTTTTLGDATKATWPASback to top mRNA from alignment at Ecto-sp6_S_contig105:616584..618506+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig105.1023.1 ID=mRNA_Ecto-sp6_S_contig105.1023.1|Name=mRNA_Ecto-sp6_S_contig105.1023.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1923bp|location=Sequence derived from alignment at Ecto-sp6_S_contig105:616584..618506+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig105:616584..618506+ >mRNA_Ecto-sp6_S_contig105.1023.1 ID=mRNA_Ecto-sp6_S_contig105.1023.1|Name=mRNA_Ecto-sp6_S_contig105.1023.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=312bp|location=Sequence derived from alignment at Ecto-sp6_S_contig105:616584..618506+ (Ectocarpus species6 EcLAC_371)back to top |