mRNA_Ecto-sp6_S_contig104.959.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig104.959.1
Unique NamemRNA_Ecto-sp6_S_contig104.959.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: D7G6P5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P5_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 2.020e-139
Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 3
Query:   39 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV 641
            MKIFQALILGMATVAGTVSADADVTDVT+RVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV
Sbjct:    1 MKIFQALILGMATVAGTVSADADVTDVTHRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV 201          
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A835ZLK1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLK1_9STRA)

HSP 1 Score: 267 bits (683), Expect = 6.160e-85
Identity = 134/200 (67.00%), Postives = 156/200 (78.00%), Query Frame = 3
Query:   39 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638
            MK+   L L +  V+  ++A   V  VT  V+FD+ I G   GRI MGL+G AVPKTVENFR LCTGE G GKVY KPL YKGS+FHR+IPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFP EL H +PG+LSMAN+G +TNGSQFFI TV TPWL+GKHVIFG+V E  M++V  IEKLGS+SG    KV++ DSGE+
Sbjct:    1 MKLCGVLALVLCAVSSVMAA---VDSVTKMVFFDMEIDGKPGGRIVMGLYGEAVPKTVENFRALCTGEKGVGKVYHKPLTYKGSSFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPKELKHKEPGMLSMANAGPNTNGSQFFITTVATPWLDGKHVIFGKVLE-GMDVVKSIEKLGSQSGRPQAKVKVADSGEI 196          
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A7S1FIF5_NOCSC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIF5_NOCSC)

HSP 1 Score: 241 bits (614), Expect = 1.060e-74
Identity = 121/179 (67.60%), Postives = 144/179 (80.45%), Query Frame = 3
Query:  102 ADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638
            A+   VT++V+FDI++ G +AGRI MGL+G+ VPKTVENFR LCTGE G GK   KPLHYKGS FHRVIP FMLQGGDFTHGTGTGGESIYG KF+DE F  +L H  PG LSMAN+GK+TNGSQFFI TV T WL+GKHV+FG+V E  M++V ++E +GS+SG  S+ VEI DSGEL
Sbjct:   16 AEDPKVTHKVFFDITLDGEDAGRIVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTHGTGTGGESIYGSKFNDENF--QLKHTAPGKLSMANAGKNTNGSQFFITTVTTSWLDGKHVVFGEVLE-GMDIVQKVEAVGSQSGKTSKLVEIKDSGEL 190          
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A7S3KS35_EUPCR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KS35_EUPCR)

HSP 1 Score: 239 bits (611), Expect = 3.530e-74
Identity = 121/205 (59.02%), Postives = 152/205 (74.15%), Query Frame = 3
Query:   24 LHSETMKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638
            + S T+ IF AL++  AT      A+  + +VT++VYFD+S+GG   GR+  GLFG  VPKTVENFR LCTGE G G   +KPLHYKGS FHR+IPQFM QGGDFT+  GTGGESIYG KF+DE F  EL H KP +LSMAN+G +TNGSQFFI  V TPWL+G+H +FG+V E   E+V ++EK+GS++G  S++V I DSGEL
Sbjct:    1 MKSSTIAIFFALLVAFAT------AEDPIAEVTHKVYFDVSVGGENVGRVVFGLFGGVVPKTVENFRALCTGEKGEGS-NKKPLHYKGSPFHRIIPQFMAQGGDFTNENGTGGESIYGHKFEDENF--ELKHSKPYLLSMANAGPNTNGSQFFITFVVTPWLDGRHTVFGEVLE-GQEIVDQLEKIGSQTGKPSKEVRIVDSGEL 195          
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A5C5WTT8_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rubripirellula amarantea TaxID=2527999 RepID=A0A5C5WTT8_9BACT)

HSP 1 Score: 239 bits (610), Expect = 6.090e-74
Identity = 123/195 (63.08%), Postives = 145/195 (74.36%), Query Frame = 3
Query:   54 ALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638
            A++     V    +   +  +VT++VYFD+SI G EAGRITMGLFG  VP+TVENFR LCTGEAG       PLHYKGS FHRVIP FMLQGGDFT G GTGGESIYG KFDDEAF    +H+ PG+LSMAN+G++TNGSQFFI TVPTP LNG+HV+FG+V +  M LV +IE LGS+SGA   K+ I D GEL
Sbjct:   10 AIVSSFGLVGSVEARSPEDGEVTHKVYFDVSIDGKEAGRITMGLFGKDVPQTVENFRALCTGEAGKTDS-GVPLHYKGSVFHRVIPNFMLQGGDFTAGNGTGGESIYGEKFDDEAFT--FVHNMPGILSMANAGRNTNGSQFFITTVPTPHLNGRHVVFGKVID-GMALVKKIESLGSQSGATRAKIVIADCGEL 200          
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A7S4E7D2_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7D2_9STRA)

HSP 1 Score: 237 bits (604), Expect = 3.720e-73
Identity = 124/192 (64.58%), Postives = 143/192 (74.48%), Query Frame = 3
Query:   63 LGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638
            L + + A + +  A    VTN+V+FDISIGG  AGR+ MGL+G+ VPKTVENFR LCTGE G GK   KPLHYKGS FHRVIP FMLQGGDFT G GTGGESIYG KF DE F  EL H   GVLSMAN+G  TNGSQFFICTV T WL+G+HV+FG V E  M++V  +EK+GS  G  ++ VEITDSGEL
Sbjct:    4 LALLSAALSAAVAAAEPKVTNKVFFDISIGGAPAGRVVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTRGDGTGGESIYGEKFADENF--ELKHTGAGVLSMANAGPGTNGSQFFICTVKTAWLDGRHVVFGGVLE-GMDVVKAVEKVGSGGGKTTKTVEITDSGEL 191          
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A2P6VIM7_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VIM7_9CHLO)

HSP 1 Score: 236 bits (603), Expect = 9.850e-73
Identity = 124/196 (63.27%), Postives = 144/196 (73.47%), Query Frame = 3
Query:   51 QALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638
            ++ +L +A      SA A    +TN+V+FD+ I G  AGRI MGLFG  VPKTVENFR LCTGE G GK   KPLHYKGS FHRVIPQFMLQGGDFTHGTGTGGESIYG KF DE F  +L H  PG LSMAN+G DTNGSQFFI TV T WL+G+HV+FG+V E  +++V ++E  GS+SG    KV I DSGEL
Sbjct:    5 RSALLTLALALFAASAAAKGPAITNKVFFDVEIDGKPAGRIVMGLFGKTVPKTVENFRALCTGEKGVGKS-GKPLHYKGSVFHRVIPQFMLQGGDFTHGTGTGGESIYGEKFADENF--KLKHKGPGYLSMANAGADTNGSQFFITTVKTAWLDGRHVVFGKVIE-GLDVVYKVEAEGSQSGKTKSKVIIADSGEL 196          
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A7S4MYZ1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYZ1_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.080e-72
Identity = 122/200 (61.00%), Postives = 149/200 (74.50%), Query Frame = 3
Query:   39 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638
            MKI  AL   +  ++  V A+     VT++V+FD++IG   AGRITMGLFG+ VPKT ENFR LCTGE G GK   KPLHYKGSAFHR+IP FM+QGGDFTHG G GGESIYG KFDDE F  +L H+ P  LSMANSG +TNGSQFFI TV T WL+G+HV+FG++ E   ++V ++E +GS SGA S+ V I+DSGEL
Sbjct:    1 MKIIAALSFALLAISTLVKAEEP--KVTSKVFFDVTIGDEAAGRITMGLFGDDVPKTAENFRALCTGEKGEGKA-GKPLHYKGSAFHRIIPNFMIQGGDFTHGNGRGGESIYGAKFDDENF--KLKHEGPMYLSMANSGPNTNGSQFFITTVKTAWLDGRHVVFGKILEGD-DVVKKVEAVGSNSGAPSKTVTISDSGEL 194          
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A5J9T8K8_9POAL (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9T8K8_9POAL)

HSP 1 Score: 236 bits (602), Expect = 1.690e-72
Identity = 122/201 (60.70%), Postives = 148/201 (73.63%), Query Frame = 3
Query:   36 TMKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 638
            T+ ++ AL     T+A    ++A++T+VTN+VYFDI I G  AGR+ MGLFG  VPKT ENFR LCTGE G GK   KPLHYKGSAFHR+IP FM+QGGDFT G G GGESIYG KF DE F  ++ H  PG+LSMAN+GKDTNGSQFFI TV T WL+GKHV+FG+V    M+++ ++E  G +SGA   KV I DSGEL
Sbjct:   20 TLFLWLALAAAALTLAQAKKSNAELTEVTNKVYFDIEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGMGKS-GKPLHYKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGLKFADENF--KIKHTGPGLLSMANAGKDTNGSQFFITTVTTSWLDGKHVVFGKVLS-GMDVIYKVEAEGRQSGAPKSKVVIADSGEL 216          
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Match: A0A5B9PD91_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9PD91_9BACT)

HSP 1 Score: 238 bits (606), Expect = 1.830e-72
Identity = 123/187 (65.78%), Postives = 143/187 (76.47%), Query Frame = 3
Query:   93 SADADVTDVTNRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV*KSG 653
            +ADA VT   ++VYFDI I G  AGRITMGLFG+ VPKTVENFR LCTGE G GK   KPLHYK S FHRVIPQFMLQGGDFT+  GTGGESIYG KF+DE F   ++HD PG+LSMAN+G +TNGSQFFI TVPT WLNGKHV+FG+V +  M+LV +IE  GSR+G  S  + I D GE+  + G
Sbjct:   53 AADAKVT---HKVYFDIEINGKAAGRITMGLFGDDVPKTVENFRALCTGEKGKGKS-GKPLHYKDSIFHRVIPQFMLQGGDFTNANGTGGESIYGEKFNDEKFG--IVHDVPGILSMANAGPNTNGSQFFITTVPTAWLNGKHVVFGRVTD-GMDLVKKIEARGSRTGRTSAIIRIADCGEIKVEDG 232          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6P5_ECTSI2.020e-13999.50Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A835ZLK1_9STRA6.160e-8567.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A7S1FIF5_NOCSC1.060e-7467.60Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctil... [more]
A0A7S3KS35_EUPCR3.530e-7459.02Peptidyl-prolyl cis-trans isomerase n=1 Tax=Euplot... [more]
A0A5C5WTT8_9BACT6.090e-7463.08Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rubrip... [more]
A0A7S4E7D2_9STRA3.720e-7364.58Peptidyl-prolyl cis-trans isomerase n=2 Tax=Pelago... [more]
A0A2P6VIM7_9CHLO9.850e-7363.27Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micrac... [more]
A0A7S4MYZ1_9STRA1.080e-7261.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Odonte... [more]
A0A5J9T8K8_9POAL1.690e-7260.70Peptidyl-prolyl cis-trans isomerase n=1 Tax=Eragro... [more]
A0A5B9PD91_9BACT1.830e-7265.78Peptidyl-prolyl cis-trans isomerase n=1 Tax=Marini... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig104contigEcto-sp6_S_contig104:410910..415207 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score406.0
Seed ortholog evalue1e-110
Seed eggNOG ortholog2880.D7G6P5
Model size1317
KEGG koko:K01802
Hectar predicted targeting categorysignal peptide
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564
Exons6
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0865@2759
Ec32 ortholog descriptionCyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Ec32 orthologEc-26_000140.1
EC5.2.1.8
Cds size606
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig104.959.1prot_Ecto-sp6_S_contig104.959.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig104 411583..415169 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348747.8225439-UTR-Ecto-sp6_S_contig104:410909..4115821682348747.8225439-UTR-Ecto-sp6_S_contig104:410909..411582Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig104 410910..411582 -
1682348747.8955958-UTR-Ecto-sp6_S_contig104:415169..4152071682348747.8955958-UTR-Ecto-sp6_S_contig104:415169..415207Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig104 415170..415207 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348747.8344288-CDS-Ecto-sp6_S_contig104:411582..4116901682348747.8344288-CDS-Ecto-sp6_S_contig104:411582..411690Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 411583..411690 -
1682348747.8436685-CDS-Ecto-sp6_S_contig104:412221..4123531682348747.8436685-CDS-Ecto-sp6_S_contig104:412221..412353Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 412222..412353 -
1682348747.8537436-CDS-Ecto-sp6_S_contig104:413252..4133421682348747.8537436-CDS-Ecto-sp6_S_contig104:413252..413342Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 413253..413342 -
1682348747.8659523-CDS-Ecto-sp6_S_contig104:413687..4137781682348747.8659523-CDS-Ecto-sp6_S_contig104:413687..413778Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 413688..413778 -
1682348747.8761632-CDS-Ecto-sp6_S_contig104:414096..4142031682348747.8761632-CDS-Ecto-sp6_S_contig104:414096..414203Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 414097..414203 -
1682348747.886322-CDS-Ecto-sp6_S_contig104:415091..4151691682348747.886322-CDS-Ecto-sp6_S_contig104:415091..415169Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 415092..415169 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig104.959.1

>prot_Ecto-sp6_S_contig104.959.1 ID=prot_Ecto-sp6_S_contig104.959.1|Name=mRNA_Ecto-sp6_S_contig104.959.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=202bp
MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIGGTEAGRITMGLF
GNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDF
THGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFIC
TVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL
V*
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mRNA from alignment at Ecto-sp6_S_contig104:410910..415207-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig104.959.1 ID=mRNA_Ecto-sp6_S_contig104.959.1|Name=mRNA_Ecto-sp6_S_contig104.959.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4298bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:410910..415207- (Ectocarpus species6 EcLAC_371)
CAGGTAAAGGGAAAGGAAGAACGCTCCACTCAGAAACGATGAAGATCTTC CAGGCCTTGATTCTCGGCATGGCTACTGTCGCCGGCACCGTGAGTGCCGA TGCCGACGTGACTGATGTGAGTCAAGAGTCTCCTGGGTAGTTGTTCCTTG CCGGCCCTTGGCTCTGTAGACGTACAGCGAGCGCTCGCACATGATAAAAT GGCATGTAAGAACGCTAGGGTTCCAAATTTGTAAGCTTGTCAAAACATAG AACGCGGACCCTAGTTCTACAAAAACCAAGGTGTTGAACCAACAGGGAGT ACAAGCTTTGCCGGGTTGCGTAAGACAGGTGCTGAATCTTGGGCGCACAC TACTGCAGCACATGCTCGCCTCACTTGCACTGATGTAGTAATAGTAGAGG AGCCGCAGCAACAGCAACAGTCGGGATTTACGCTGCGTTCGTCTTGGTGC CTGAGCTTCTGACGACCTGACGACGGTGTGCAGAAGAACATGATCGATGT GTGGACGCCTAGTCGGAAATGGGTACGGGGAGTTGTGGCTGCTTCCCGCC CGCAGTGCGCGCAGATGGACGAACGGGTCTGACGTGTGTGAAATGGCCCA AGTGTTCCCAGATGTATTTCCCATCGGGGGCGGGCCAGCGAGACCCTCAT TTTTCTAGTCAAGTCCTCTTTTCCTCCTTCAGTTTATGTTCTCCAGATGG ACATGTAGGGAACTTGCTGTGTATCGCGTATAAGCGACGTGAGTTACGCC TGTGTGTGCATCGAGCTCTCCTCTTCGAAATGGCAGCCGAGATGTTGTTG TTTGGCAACGTGCATCAATAACGAATGCCGTCGAAATTTCCTACATCACC ACCGTGTTTCCGCCGAACTACGGGAAGAAAAGTCGTCGAGCACGCCAGCA TCTTGTTGTCGTTCCATGTTGCCTTGATGGCGATATGGATATGCAGTTCT TGCGCCTGCCTCTTCTTGAGTTGCTCGGGCTGTGCGTTGACCGCTTGGCC GCAGGTGACTAACCGTGTGTACTTCGACATCAGCATCGGTGGAACGGAGG CTGGCCGCATCACGATGGGACTGTTCGGTAACGCCGTACCCAAGACGGTC GAGAACTTTAGGTGAGTGTGGGTGTGGGTCCTTATTTTCATCTATAATAG CATAAACCACGCTAAATGGGCTGACCACTGAAAAGACATGCGCCTCGTGG CGAGACAAAAACACACACGCTTTTGCAATAGCGTTTGAGGTTATGTTGTT GCTTGCTTGCTGGAATCGAGTTGGACTGCTCTGGTACACGCATATGGCAT GCGCACATTCAACCAATTGACGGGAAACCCTAGCATGTTGGCGAAATTCG CCGTGATTTTTCTATCCTCACTCGGCTGACGCCACGACTCTCAACTACTG CATTGATTGGGTAATTGGTGTCGGTTCAGGCAACTGTGCACCGGGGAGGC CGGGCCTGGAAAGGTGTACCGAAAGCCGCTGCACTACAAGGGCTCTGCTT TCCACCGCGTCATCCCGCAGGTACGCCACTGAATGGCACTATTACTGCTG TACATGTGCCCATCTACCAGAACAGAATAACAAGCCCTAAGTTGACTGAC ACACATCGACGGCACAGCAGTGTGTTGCTGCACGGTCGCCTGAGAACACT GCCGTACCGTTGACCTAAGCCCACCAGGCTCAGTCTTCGTTGCGTAAAAT CGAGGCGCGGTTTCTGTGGTTTTAGCTGGTGCTTGTGCTTGAGTAATGCA TCATCGACCAAATGGCCCAGGCGTCCTCCTTGAGCTGCACTGCTTTGCTT GCTGGAGGCGCGGTTCACTGGACCAAGTTTCTTGGACCCTCCCTTCCTTG CTCCGAAACGTGCAGTTCATGCTCCAGGGTGGCGACTTCACCCACGGAAC TGGTACGGGTGGCGAGTCTATCTACGGCGGAAAGTTTGACGACGAAGCCT TTCCCGTGAGTCAGTACAGCAGTGCAGTGCCCCCATCATCATACAGTCAA TACCGACACACAGCTTTGTTGACAGCATGTATCATCCGGGGACAAACAGG GGTGAGAGAAGACGCACCTATTGTAGTTTTTTTCTTTTCTCCACTTATCT TCTGCCGTGTTTGCCTCGAGTCTTTCTGTGGCAAGAAGGGGCCAGCCGTC GGTTTCCCTTGTGGATAGTGTTGAGTGTACTGCGCATGTAGAAGAGAATG TACAAGCGTGGACATGACCTATGTGTGTACCGCGGAAGAAGACGACTCTT ACACATGACACACCTTCTCCAGAGTACAGCAGTAGCGGCAGAGTCCATCT TCGAGCGATTTTGCTAGTAAAATATGAGGTACAAAACAAAAGAGCTGTCT CTGTCTCTGCGGGGGGGGCTCCTTTGCCGACCGGTACTACGATAAACCTT CCCGAGGTCAGCGCCACAGATATAAAAGACCACCAGTAGTGCGTGCGCAC ATATGCATTGTGAGACGCACAAGTGAAGTGTTTCGCCAATGGTGTGGAGG GCAGTCACAGTAATGTTATCGGTGTTTCGTTATTTACTGTACGACTACAC TCTGACCTTCCGGGTTGGCTGCGAGTAATTCAGTTGGATGCGGCTTTGGC GTCATGACGAAATACGAATCAAACACATGTACGCTCTCACAAAGATGTCG CCGCTCGTGGCAGCCTCTTCCAATACATCACATCTACGTAGAGTATTGAT TTCACGATGCATATAATATGTACAGCATGCAATTGGTGGGCACGTACGTA CGTCCCCTTTGCTTGCTCCCGCGTACATTCTAGTAACCATGGCACGATAC ATTATGTCACATTTGCATGTACCCTGTCGCTTGTCCGCGCGTCTTGGTGG CCAGCCTGAGTTGATCCACGACAAGCCTGGAGTTCTGTCGATGGCCAACT CGGGTAAGGACACGAACGGGTCGCAGTTCTTCATCTGCACCGTGCCTACC CCGTGGTTGAACGGCAAGCACGTCATCTTCGGACAGGTGAACTAAAACGA GTCAACTATGCTTGGGATCGCCAAGAGGGTTTTTGTGTGGGGCGTGTATA GCTAGCACTATGCGAGGGTTTGACGTGACTCCAGCACGTGTTGGGACATG TGGGAAATGGTACCAACTACACCAGCGGGTGCCGCATTAGGTAAGGAATA GGTACGGCACTGCACATCTCGTAAGAATCAAAGATGGTGCAGCACACCAG CGTCCGCGGCTGTATTTGGATTACCCAGAGCCCCGGAGGTAGACGTGAAT GGCCTTGCCGTGACCCCCCCCCTGTCTTGCAGCGTTTTGGGGTGCACCCT GCAGCAATCGCTTAAAACCAGTTCCTGATTGCTGCTGCGTAGGTCCTTTA GTTTGTGTACTGGTGCATACTCGTTTCGACAGATGTGTGTTGTTTGTTGC GTCGGCGACGGCGATAGCGTTGACGATGCGGTGAAATGGGGACGAAACTG GTAATGTAAAAAGGTGGAAAACAATAACGCGGCGTCCGCGTTTTCCTTCG CGTTTGCCCTTGGACAGGTGGAGGAAGAGAGCATGGAACTCGTGTCCAGA ATCGAGAAGCTCGGCAGCCGAAGCGGAGCTCTCTCGGAAAAGGTGGAGAT CACCGACTCCGGAGAGCTCGTGTAGAAGAGCGGAGCAGAGCATCGCACAG CACCGTGTGCGCTAACGCTAACATGATGCTTCACGGGAAAGGGGGGGCAA TGACAGTGCTGTAGCGTTAGGTTAGGGTTTGATTGGCTGGCCGCCCTTAC CTCGAGATGTCCAGCTGTGCAGGGAGGTATTACTGAAGTGGTAGCAGGTG TCAAGTGGAGTTGGAATGTTCGGGGTTGTTGCTCTCCACGTTCAGCAACA TGCGACTGCAGGACGCGATTCCAGGATTAGGCTACGATTACTACAGGCGG TCCTGCTGTTTGTATAACATTGACAAGTGTGCGTTAATGTTTGTGGTTTT GATGCCAATGTGCTGCCAACAACAGCAGCCTCCGGGTGTACTGTTACTGC GGCGTATCGTATGATGAGTGTTGGTGTAACCACGATCTAGTTGTAGTGTA AACTGTTGGACCCTGTTAGGGTGGACACACCGGGGTGTCTGTCTCCAAGA CCGCAGTCGTACTTGATGCAGTCGGTGTGGGCAGGATCGAATCAACGCTG TGCTTTTCACTGGTGCTCTGCCAAAACATTCACCACGAACGACTTTGGCC ACCTCAAAATGCACGAAGATTTGTGGAAAAAACAACATACGAAGTCGCTC ATGATATGAAACCGCCTGCGCGGTGACAGACACACAGTCAGTCACCCG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:410910..415207-

>mRNA_Ecto-sp6_S_contig104.959.1 ID=mRNA_Ecto-sp6_S_contig104.959.1|Name=mRNA_Ecto-sp6_S_contig104.959.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:410910..415207- (Ectocarpus species6 EcLAC_371)
ATGAAGATCTTCCAGGCCTTGATTCTCGGCATGGCTACTGTCGCCGGCAC
CGTGAGTGCCGATGCCGACGTGACTGATGTGACTAACCGTGTGTACTTCG
ACATCAGCATCGGTGGAACGGAGGCTGGCCGCATCACGATGGGACTGTTC
GGTAACGCCGTACCCAAGACGGTCGAGAACTTTAGGCAACTGTGCACCGG
GGAGGCCGGGCCTGGAAAGGTGTACCGAAAGCCGCTGCACTACAAGGGCT
CTGCTTTCCACCGCGTCATCCCGCAGTTCATGCTCCAGGGTGGCGACTTC
ACCCACGGAACTGGTACGGGTGGCGAGTCTATCTACGGCGGAAAGTTTGA
CGACGAAGCCTTTCCCCCTGAGTTGATCCACGACAAGCCTGGAGTTCTGT
CGATGGCCAACTCGGGTAAGGACACGAACGGGTCGCAGTTCTTCATCTGC
ACCGTGCCTACCCCGTGGTTGAACGGCAAGCACGTCATCTTCGGACAGGT
GGAGGAAGAGAGCATGGAACTCGTGTCCAGAATCGAGAAGCTCGGCAGCC
GAAGCGGAGCTCTCTCGGAAAAGGTGGAGATCACCGACTCCGGAGAGCTC
GTGTAG
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