mRNA_Ecto-sp6_S_contig104.950.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: D7G6N7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6N7_ECTSI) HSP 1 Score: 254 bits (650), Expect = 5.300e-78 Identity = 138/145 (95.17%), Postives = 139/145 (95.86%), Query Frame = 1 Query: 88 MRFASFPKATALLLAATLLSALMAEAGHAGEAGMEKAKEASSRGLAEEGVTEEVMVAERPRSHPHEKEMKQRKPRMATMGVQQTWKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKENIVTRPPRVG 522
MRFASFPKATALLLAATL SA MAEAGHAGEAGMEKAKEASSRGLAEEGVTEEVMV E PRSHPHEKE KQRKPRMATMGVQQTWKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVT DMRTDRVRIY+DKENIVTRPPRVG
Sbjct: 1 MRFASFPKATALLLAATLPSAPMAEAGHAGEAGMEKAKEASSRGLAEEGVTEEVMVGELPRSHPHEKEKKQRKPRMATMGVQQTWKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTMDMRTDRVRIYYDKENIVTRPPRVG 145
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: A0A836CAH7_9STRA (Putative inhibitor of trypsin and hageman factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.830e-8 Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 340 WKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKENIVTRPPRVG 522
W ECVGM E+A ++IK ARPD + ++ + + AMVT D +RVR++ DK+ IVTR P VG
Sbjct: 13 WPECVGMKGEDAAQLIKEARPDWQ-VSVLSQDAMVTMDFGFERVRVFVDKDGIVTRAPHVG 72
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: UPI00142558B8 (subtilisin inhibitor CLSI-I-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142558B8) HSP 1 Score: 58.2 bits (139), Expect = 6.190e-7 Identity = 32/61 (52.46%), Postives = 38/61 (62.30%), Query Frame = 1 Query: 340 WKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKENIVTRPPRVG 522
W + VG + A I P L +T VP G MVT D RTDRVRIY DK NIVT+PP++G
Sbjct: 35 WPDLVGETGDNAKGQILGDNPSL-DVTIVPYGHMVTTDYRTDRVRIYVDKNNIVTKPPKIG 94
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: A0A2Z6MXH2_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MXH2_TRISU) HSP 1 Score: 53.9 bits (128), Expect = 9.970e-6 Identity = 28/70 (40.00%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 313 MATMGVQQTWKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKENIVTRPPRVG 522
M++ +++W E VG++ + AV++I++ + T VPE + VT D R DRVR++ DK++IVTR P +G
Sbjct: 1 MSSCKGKKSWPELVGINGDAAVQIIRSENSSVSAST-VPEDSFVTTDFRCDRVRVFVDKQDIVTRVPNIG 69
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: UPI0018D87B8B (glu S.griseus protease inhibitor-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D87B8B) HSP 1 Score: 54.3 bits (129), Expect = 1.590e-5 Identity = 32/63 (50.79%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 334 QTWKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKENIVTRPPRVG 522
+TW E VG EEA +I+ P L ++ VP G VTAD RTDRVRIY D E V PP +G
Sbjct: 38 ETWPELVGQTGEEAKAVIEREDPTL-EVEIVPYGYAVTADYRTDRVRIYLDAEGRVATPPTIG 99
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: A0A6J5VVK4_PRUAR (Uncharacterized protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5VVK4_PRUAR) HSP 1 Score: 52.8 bits (125), Expect = 2.690e-5 Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 337 TWKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKENIVTRPPRVG 522
+W E VG D E A I+ +PD+ I +PEG ++T ++R +RVR++ D+ +VT PRVG
Sbjct: 11 SWPELVGEDGEVAAAKIEQEKPDVHTIV-IPEGTIITQELRCNRVRVWVDENGVVTAVPRVG 71
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: G7JZ30_MEDTR (Inhibitor of trypsin and hageman factor-like protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7JZ30_MEDTR) HSP 1 Score: 52.4 bits (124), Expect = 3.490e-5 Identity = 27/70 (38.57%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 313 MATMGVQQTWKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKENIVTRPPRVG 522
M++ ++TW E VG++ E A ++I + L + +PE ++ TAD R DRVR++ DK+++VTR P++G
Sbjct: 1 MSSCKGKKTWPELVGVNGEAAAQIIMSEN-SLVTASTLPEDSVFTADFRCDRVRVFVDKQDVVTRVPKIG 69
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: A0A371G8G3_MUCPR (Uncharacterized protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371G8G3_MUCPR) HSP 1 Score: 52.4 bits (124), Expect = 3.580e-5 Identity = 26/62 (41.94%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 337 TWKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKENIVTRPPRVG 522
+W+E VG++ E A ++I P ++ VPEG++VT D R DRVR++ + ++IVTR P++G
Sbjct: 10 SWQELVGINGEAATQIIVRENPRVKAFI-VPEGSVVTTDFRCDRVRVFVNYKDIVTRVPKIG 70
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: A0A314XRS1_PRUYE (Uncharacterized protein n=2 Tax=Prunus TaxID=3754 RepID=A0A314XRS1_PRUYE) HSP 1 Score: 52.4 bits (124), Expect = 6.030e-5 Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 337 TWKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKENIVTRPPRVG 522
+W E VG D E A I+ +PD+ I +PEG ++T ++R +RVR++ D+ +VT PRVG
Sbjct: 30 SWPELVGEDGEVAAAKIEQEKPDVHAIL-IPEGTIITQELRCNRVRVWVDENGVVTAVPRVG 90
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Match: UPI001364E18B (serine protease inhibitor n=1 Tax=Streptacidiphilus albus TaxID=105425 RepID=UPI001364E18B) HSP 1 Score: 51.6 bits (122), Expect = 6.870e-5 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 340 WKECVGMDVEEAVEMIKAARPDLRKITKVPEGAMVTADMRTDRVRIYHDKEN-IVTRPPRVG 522
W E VG+DV+EAV+ ++ A P L + V G+ VTAD RTDRVR++ ++ V+R PR+G
Sbjct: 11 WPELVGVDVDEAVQSLREAAPALN-VWPVASGSGVTADCRTDRVRLWFEEATRTVSRVPRIG 71 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.950.1 >prot_Ecto-sp6_S_contig104.950.1 ID=prot_Ecto-sp6_S_contig104.950.1|Name=mRNA_Ecto-sp6_S_contig104.950.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=146bp MRFASFPKATALLLAATLLSALMAEAGHAGEAGMEKAKEASSRGLAEEGVback to top mRNA from alignment at Ecto-sp6_S_contig104:291355..296022- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig104.950.1 ID=mRNA_Ecto-sp6_S_contig104.950.1|Name=mRNA_Ecto-sp6_S_contig104.950.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4668bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:291355..296022- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:291355..296022- >mRNA_Ecto-sp6_S_contig104.950.1 ID=mRNA_Ecto-sp6_S_contig104.950.1|Name=mRNA_Ecto-sp6_S_contig104.950.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=438bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:291355..296022- (Ectocarpus species6 EcLAC_371)back to top |