mRNA_Ecto-sp6_S_contig104.945.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: A0A6H5J608_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J608_9PHAE) HSP 1 Score: 575 bits (1481), Expect = 5.640e-204 Identity = 308/396 (77.78%), Postives = 325/396 (82.07%), Query Frame = 1
Query: 1 MKRRADAATAAAARWSSAKASVTAVAVRCLSVYQPPPXXXPAAACSANP----CLALALAVFSPGTRRLPLVCIGAPT-----------TPSFVCSGSDLSPSPEWKDTTSFFASRGCTVGTMALTGRGNSPTDTLTLRALQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGALANEHLLRARAGDPGEPNDHVAGVSASLGAHELAQLMKDDPAHWEGLLRRYFFEFHQHSPWHNAPLPCPRHNLERGVIKEDNRHFSCPSPDPRFPVKAFAQMCLSEMSSTLRLESHVVDTLVLGSGMATSATSTSRAGGSGCADGVAALDDARSDALSAICEFHGTDGWREVDHRGVVTDPFGMPDNASPWQEVVWEWYDARF 1143
M RRADAA AAAA+WSSAKA+VTAVAVRCLS P P PA SA C + S G+ P + P TP + +G P+ WKDTTSFFASRGCTVGTMALTGRG+SPTDTLTLRALQAGVAAAV+KSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPP+PGALANEHLLRARAGDPGEPND VAG ASLGA ELAQLMKDDPAHWEGLLRRYF EFHQHSPWHNAPL CPR++LERGVIKE+NRH C SPDPRFPVKAFAQMCLSE SSTLRLESH V+TLVLGSGMATSATSTS+ GGSGCADG AALDDARSDALSAICEFHGTDGWREVDHRGVVTD GMP+NA PWQEVVWEWYDARF
Sbjct: 1 MLRRADAAAAAAAQWSSAKATVTAVAVRCLSQRIPYPQGFPALPSSARGDGRRCSS------SSGSSSTPAIDFAVPPAVLDDGYFEKPTPLLLVAGEG-RPAAWWKDTTSFFASRGCTVGTMALTGRGSSPTDTLTLRALQAGVAAAVDKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPAPGALANEHLLRARAGDPGEPNDPVAGAPASLGAQELAQLMKDDPAHWEGLLRRYFSEFHQHSPWHNAPLSCPRYDLERGVIKEENRHSPCSSPDPRFPVKAFAQMCLSETSSTLRLESHAVETLVLGSGMATSATSTSKTGGSGCADGGAALDDARSDALSAICEFHGTDGWREVDHRGVVTDGNGMPENAPPWQEVVWEWYDARF 389
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: D7G6S5_ECTSI (Hydrolase, alpha/beta fold family protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6S5_ECTSI) HSP 1 Score: 261 bits (667), Expect = 2.930e-83 Identity = 134/153 (87.58%), Postives = 142/153 (92.81%), Query Frame = 1
Query: 223 TPSFVCSGSDLSPSPEWKDTTSFFASRGCTVGTMALTGRGNSPTDTLTLRALQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGALANEHLLRARAGDPGEPNDHVAGVSASLGAHELAQLMKDDPAHWEGLLR 681
TP + +G P+ WKDTTSFFASRGCTVGTMALTGRG+SPTDTLTLRALQAGVAAAV++SGLTPPVI+AHSMAGFVCQQYLQSYSASGLVLL+SFPPSPGALANEHLLRARAGDPGEPNDHVAG SASLGA ELAQLMKDDPAHWEGLLR
Sbjct: 15 TPLLLVAGEG-QPAAWWKDTTSFFASRGCTVGTMALTGRGSSPTDTLTLRALQAGVAAAVDQSGLTPPVIMAHSMAGFVCQQYLQSYSASGLVLLESFPPSPGALANEHLLRARAGDPGEPNDHVAGPSASLGAQELAQLMKDDPAHWEGLLR 166
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: A0A0Q2QE95_MYCGO (AB hydrolase-1 domain-containing protein n=1 Tax=Mycobacterium gordonae TaxID=1778 RepID=A0A0Q2QE95_MYCGO) HSP 1 Score: 58.2 bits (139), Expect = 5.600e-6 Identity = 42/97 (43.30%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 289 FFASRGCTVGTMALTGRGNSPTDTLTLRALQAGVA--AAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPS-----PGALANEHLLR 558
FFAS G V +L G G SP TL ++ VA A+V +S TPPV++ HSM GFV Q YL ++A+G +LL S PS G +A H +R
Sbjct: 38 FFASHGYRVVAPSLRGHGASP-GTLRWARIRDYVADVASVAQSLPTPPVVIGHSMGGFVVQHYLTRHTAAGAILLASIRPSGVLRVTGRIARRHPVR 133
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: A0A0J6VVA3_9MYCO (Non-heme chloroperoxidase n=4 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A0J6VVA3_9MYCO) HSP 1 Score: 56.6 bits (135), Expect = 1.830e-5 Identity = 38/83 (45.78%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 286 SFFASRGCTVGTMALTGRGNSPTDT----LTLRALQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPP 522
S+FA RG ++L G G S TD T +A VAA V + TPPV+V HSM GFV Q+YL+S+ A VL+ S PP
Sbjct: 37 SWFADRGYRALALSLRGHGGSSTDKPLNDCTFDDYEADVAA-VAATLATPPVLVGHSMGGFVVQKYLESHEAPAAVLMASMPP 118
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: UPI001F61926E (alpha/beta fold hydrolase n=1 Tax=Mycobacterium kubicae TaxID=120959 RepID=UPI001F61926E) HSP 1 Score: 54.3 bits (129), Expect = 1.910e-5 Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 289 FFASRGCTVGTMALTGRGNSPTD-TLTLRALQAGVA--AAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPS 525
FFA+RG V +L G G+S D L LR++ VA A + S + P++V HSM GF+ Q+YL+ YSA VLL S PP+
Sbjct: 18 FFATRGFHVVAPSLRGHGSSQRDGPLRLRSIADFVADVAQIANSLASEPILVGHSMGGFIVQKYLERYSAPAGVLLASAPPT 99
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: UPI00132F66D8 (alpha/beta fold hydrolase n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00132F66D8) HSP 1 Score: 53.1 bits (126), Expect = 2.870e-5 Identity = 34/71 (47.89%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 289 FFASRGCTVGTMALTGRGNSPTDTLTLRALQAGV----AAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSA 489
FFA +G V +L G GNSPTD T RAL A V TPPV++ HSM GF+ Q+YL+S+SA
Sbjct: 42 FFADKGYRVVAPSLRGHGNSPTDK-TFRALSIADYVDDVATVAADLPTPPVVIGHSMGGFIVQKYLESHSA 111
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: A0A2S8KR19_MYCAO (Alpha/beta hydrolase n=2 Tax=Mycolicibacterium austroafricanum TaxID=39687 RepID=A0A2S8KR19_MYCAO) HSP 1 Score: 55.5 bits (132), Expect = 4.430e-5 Identity = 50/143 (34.97%), Postives = 67/143 (46.85%), Query Frame = 1
Query: 289 FFASRGCTVGTMALTGRGNSPTDTLTLRALQAGV----AAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGALANEHLLRARAGDPGEPNDHVAGVSAS------LGAHELAQLMKDDPAHWEGLLRRY 687
FFASRG ++L G G+S T LRAL AV + TPP++V HSM GF+ Q+YL+ +SA VL+ S PP+ + LR H A VS + + LA+ P E L+RRY
Sbjct: 38 FFASRGYRAVALSLQGHGHSGTSK-PLRALSFDDYLQDITAVADTLATPPIVVGHSMGGFLVQKYLEHHSAPAAVLMASMPPTGYLASGLRWLRRHPW-------HFAKVSITGRSLPYVSTPPLARERFFSPQTPEALVRRY 172
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: W0SL50_9PROT (Alpha/beta hydrolase n=4 Tax=Betaproteobacteria TaxID=28216 RepID=W0SL50_9PROT) HSP 1 Score: 55.1 bits (131), Expect = 5.600e-5 Identity = 44/137 (32.12%), Postives = 68/137 (49.64%), Query Frame = 1
Query: 289 FFASRGCTVGTMALTGRGNSP----TDTLTLRALQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGALANEHLLRARAGDPGEPNDHVAGVSASLGAHELAQLMKDDPAHWEGLLRRY 687
FFA G ++L+G G SP D+ ++ VAA V + PPV++ HSM GFV Q+YL+ + A G VL+ + PP A ++ ++ G + N ++G ASL L + + P + L R Y
Sbjct: 31 FFAEAGYAAYAVSLSGHGGSPGRKHLDSFSIGDYVRDVAA-VAAALPAPPVLIGHSMGGFVVQKYLEEHIAPGAVLMCAVPPQGLLSAAMGMMFSKPGMMKDLNSLMSGGKASL--ETLREALFAQPVSLDDLKRYY 164
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: A0A2N2UU17_9PROT (Alpha/beta hydrolase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-11 TaxID=2013702 RepID=A0A2N2UU17_9PROT) HSP 1 Score: 55.1 bits (131), Expect = 6.380e-5 Identity = 42/116 (36.21%), Postives = 60/116 (51.72%), Query Frame = 1
Query: 289 FFASRGCTVGTMALTGRGNSP----TDTLTLRALQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGALANEHLLRARAGDPGEPNDHVAGVSASLGA 624
FFA G ++L+G G SP D+L++ A VA AV PPV++ HSM GFV Q+YL+ ++A VL+ S PP A L+ +R G + N + G +L A
Sbjct: 47 FFAEAGYAAHALSLSGHGASPGRERLDSLSIDDYVADVATAVAALP-APPVLIGHSMGGFVVQKYLERHTAPAAVLMCSVPPQGLLSAAIGLMFSRPGLMKDLNAMLGGGHVALDA 161
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Match: A0A522Y103_9RHOO (Alpha/beta fold hydrolase n=2 Tax=Rugosibacter TaxID=1914449 RepID=A0A522Y103_9RHOO) HSP 1 Score: 55.1 bits (131), Expect = 6.950e-5 Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 1
Query: 289 FFASRGCTVGTMALTGRGNSP----TDTLTLRALQAGVAAAVEKSGL-TPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGALANEHLLRARAG 570
FFA G ++L+G G SP DTL++ VA AV +GL PPV++ HSM GFV Q+YL+ ++A VL+ S PP A LL +R G
Sbjct: 45 FFAEAGYIAHALSLSGHGASPGHDRLDTLSIDDYVNDVAIAV--AGLPAPPVLIGHSMGGFVVQKYLEKHTAPAAVLMCSVPPQGLLSAAVGLLFSRPG 141 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.945.1 >prot_Ecto-sp6_S_contig104.945.1 ID=prot_Ecto-sp6_S_contig104.945.1|Name=mRNA_Ecto-sp6_S_contig104.945.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=382bp MKRRADAATAAAARWSSAKASVTAVAVRCLSVYQPPPPAAPAAACSANPCback to top mRNA from alignment at Ecto-sp6_S_contig104:238363..242133+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig104.945.1 ID=mRNA_Ecto-sp6_S_contig104.945.1|Name=mRNA_Ecto-sp6_S_contig104.945.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3771bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:238363..242133+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:238363..242133+ >mRNA_Ecto-sp6_S_contig104.945.1 ID=mRNA_Ecto-sp6_S_contig104.945.1|Name=mRNA_Ecto-sp6_S_contig104.945.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:238363..242133+ (Ectocarpus species6 EcLAC_371)back to top |