mRNA_Ecto-sp6_S_contig104.942.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig104.942.1
Unique NamemRNA_Ecto-sp6_S_contig104.942.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: A0A6H5JXZ4_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ4_9PHAE)

HSP 1 Score: 1274 bits (3298), Expect = 0.000e+0
Identity = 628/705 (89.08%), Postives = 656/705 (93.05%), Query Frame = 1 
Query:   37 MGHKCRLGVLAALAFIASPASAGCPFLSGEKGSQADLNPGVDRALGSYDDDGSYYGG--ADFSRETYEALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAVAPCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGMNDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGLDQVLSLLSPVQDDYSDVSYADLIVLAGNLALEID-LSFCAGRVDVTEGDDLISVLEPREYDDVIVGVRDRMRIRGLSVAQMVALAGRPRSASHMIALGFSGSYTSDEPPALSNAFYVTLLTETWEKVPGSDGQEYQAVGTSGVYVLATDLALVWDPEFKAQTVMYAEDNDQFLKEFASAWTAVMNADRYDGPTGNVCDDVSD 2142
            M   C+LGVLAALA    PASA CPFL G+KGSQ DL  GVDRALGSYDD  SYY G  ADFSRETYEALQ DITA+FT+S DFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIR+MGGPVLGFCAGRLDDA+G DSL LGPS EQEAVAPCAVNGTCE PLGTSTVGLIYVNPEGP GVPDPAGSA  IRDVF RMGMNDSETVALIGGGHAFGKFHGAC TGPGADP DAPEAPWPGTCGD DS TFGRAENTFTSGFEGQWTVEPLVWDN YFKDLLEYDWVMTESPAD VQWFPVLKEGATET+DEIPDIIMLTSD+ALL+D EYLAL ELFASD +YLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDT+GAKSAI SILSSDPSYPALFVTLAWQCASTYRSTD+LGGCNGARIRFSPE+DWAGNQ LDQVLSLLS VQD+Y DVSYADLIVLAGNLAL++D L FCAGRVD  EGD+LIS+LEPREYDDVIVGVRDRM+IRGLSVAQMVALAGRPRSASHM+ALGFSGSYT +E PALSNAFYVTLLTETWE+VPGS+GQE+QAVG SG+YVLATDLALVWDPEFKAQTVMYAEDN+QFLK+FASAWTAVMNADR+DGPTGNVCDD  D
Sbjct:    1 MSRTCKLGVLAALALATVPASASCPFLGGQKGSQPDLGVGVDRALGSYDD--SYYSGSGADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRLDDASGFDSLELGPSPEQEAVAPCAVNGTCEFPLGTSTVGLIYVNPEGPLGVPDPAGSAADIRDVFRRMGMNDSETVALIGGGHAFGKFHGACATGPGADPTDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETKDEIPDIIMLTSDIALLYDEEYLALVELFASDLSYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTEGAKSAIMSILSSDPSYPALFVTLAWQCASTYRSTDYLGGCNGARIRFSPERDWAGNQSLDQVLSLLSLVQDEYPDVSYADLIVLAGNLALDLDDLPFCAGRVDAAEGDELISILEPREYDDVIVGVRDRMKIRGLSVAQMVALAGRPRSASHMVALGFSGSYTDEENPALSNAFYVTLLTETWEEVPGSNGQEFQAVGRSGIYVLATDLALVWDPEFKAQTVMYAEDNEQFLKDFASAWTAVMNADRFDGPTGNVCDDAPD 703
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BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: D7G6M6_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M6_ECTSI)

HSP 1 Score: 932 bits (2409), Expect = 0.000e+0
Identity = 457/506 (90.32%), Postives = 468/506 (92.49%), Query Frame = 1 
Query:   37 MGHKCRLGVLAALAFIASPASAGCPFLSGEKGSQADLNPGVDRALGSYDDDGSYYGG--ADFSRETYEALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAVAPCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGMNDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGLDQV 1548
            M   C+LGVLAALA  A PASA CPFL G+KGSQ DL  GVDRAL SYDD  SYY G  ADFSRETYEALQ DITA+FT+S DFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIR+MGGPVLGFCAGRLDDA+G DSL LGPS EQEAVAPCAVNGTCE PLGTSTVGLIYVNPEGP GVPDPAGSA  IRDVFGRMGMNDSETVALIGGGHAFGKFHGAC TGPG DP DAPEAPWPGTCGD DS TFGRAENTFTSGFEGQWTVEPLVWDN YFKDLLEYDWVMTESPAD VQWFPVLKEGATETEDEIPDIIMLTSD+ALL+D EYLAL ELFASD +YLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAP DLPDTDGAKSAI SILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPE+DWAGNQGLDQ+
Sbjct:    1 MSRTCKLGVLAALALAAVPASASCPFLGGQKGSQPDLGTGVDRALRSYDD--SYYSGSGADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRLDDASGFDSLELGPSPEQEAVAPCAVNGTCEFPLGTSTVGLIYVNPEGPLGVPDPAGSAADIRDVFGRMGMNDSETVALIGGGHAFGKFHGACATGPGPDPTDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETEDEIPDIIMLTSDIALLYDEEYLALVELFASDLSYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPADLPDTDGAKSAIMSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPERDWAGNQGLDQL 504
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BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: D7G523_ECTSI (PEROXIDASE_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G523_ECTSI)

HSP 1 Score: 931 bits (2405), Expect = 0.000e+0
Identity = 457/515 (88.74%), Postives = 471/515 (91.46%), Query Frame = 1 
Query:   37 MGHKCRLGVLAALAFIASPASAGCPFLSGEKGSQADLNPGVDRALGSYDDDGSYYGG--ADFSRETYEALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAVAPCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGMNDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGLDQVLSLLSPVQD 1575
            M   C+LGVLAALA  A PASA CPFL G+KGSQ DL  GVDRAL SYDD  SYY G  ADFSRETYEALQ DITA+FT+S DFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIR+MGGPVLGFCAGRLDDA+G DSL LGPS EQEAVAPCAVNGTCE PLGTSTVGLIYVNPEGP GVPDPAGSA  IRDVFGRMGMNDSETVALIGGGHAFGKFHGAC TGPG DP DAPEAPWPGTCGD DS TFGRAENTFTSGFEGQWTVEPLVWDN YFKDLLEYDWVMTESPAD VQWFPVLKEGATETEDEIPDIIMLTSD+ALL+D EYLAL ELFASD +YLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAP DLPDTDGAKSAI SILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPE+DWA NQGLDQ+ + L  + +
Sbjct:    1 MSRTCKLGVLAALALAAVPASASCPFLGGQKGSQPDLGTGVDRALRSYDD--SYYSGSGADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRLDDASGFDSLELGPSPEQEAVAPCAVNGTCEFPLGTSTVGLIYVNPEGPLGVPDPAGSAADIRDVFGRMGMNDSETVALIGGGHAFGKFHGACATGPGPDPTDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETEDEIPDIIMLTSDIALLYDEEYLALVELFASDLSYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPADLPDTDGAKSAIMSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPERDWASNQGLDQLQARLEDLAE 513
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BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: A0A6H5JAJ7_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ7_9PHAE)

HSP 1 Score: 847 bits (2189), Expect = 1.280e-293
Identity = 423/470 (90.00%), Postives = 430/470 (91.49%), Query Frame = 1 
Query:  832 GKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGLDQ---VLSLLSPVQDDYSDVSYADLIVLAGNLALEIDLSFCAGRVDVTEGDDLISVLEPREYDDVIVGVRDRMRIRGLSVAQMVALAGRPRSASHMIALGF------------------------------SGSYTSDEPPALSNAFYVTLLTETWEKVPGSDGQEYQAVGTSGVYVLATDLALVWDPEFKAQTVMYAEDNDQFLKEFASAWTAVMNADRYDGPTGNVCDDVSD 2142
            GK HGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDT+GAKSAIQSILSSDPSYPALFVTLAWQCAST+RSTD+LGGCNGARIRFSPEKDWAGNQGLDQ   +LSLLSPV+DDY DVSYADLIVLAGNLAL+IDL FCAGRVD TEGDDLISVLEPREYDDVIVGV DRMRIRGLSVAQMVALAGRPRSASHMI LGF                              SGSYTSDEPPALSNAFYVTLLTETWE+VPGSDGQEYQAVG SGVYVLATDLALVWDPEFKAQTVMYAEDNDQFLKEFASAWTAVMNADRYDGPTGNVCDDVSD
Sbjct:   29 GKLHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTEGAKSAIQSILSSDPSYPALFVTLAWQCASTFRSTDYLGGCNGARIRFSPEKDWAGNQGLDQARGILSLLSPVKDDYQDVSYADLIVLAGNLALDIDLLFCAGRVDATEGDDLISVLEPREYDDVIVGVHDRMRIRGLSVAQMVALAGRPRSASHMITLGFXMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSYTSDEPPALSNAFYVTLLTETWEEVPGSDGQEYQAVGKSGVYVLATDLALVWDPEFKAQTVMYAEDNDQFLKEFASAWTAVMNADRYDGPTGNVCDDVSD 498
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BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: D7FTZ8_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ8_ECTSI)

HSP 1 Score: 800 bits (2066), Expect = 5.200e-275
Identity = 401/507 (79.09%), Postives = 420/507 (82.84%), Query Frame = 1 
Query:   37 MGHKCRLGVLAALAFIASPASAGCPFLSGEKGSQADLNPGVDRAL----GSYDDDGSYYGGADFSRETYEALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAVAPCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGMNDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGLDQ 1545
            M   C +GVLAALA  A+P   GCPFLSG+   +  +NPG DRAL     SYD   S  GGADFS ETY+ALQ DIT MFT+S DFWPADFGNYAP MIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDK+LTLLQPIKLKYGDAVSWGDLITLTGNEAIR+MGGPVLGFCAGR DDA+GVDSL LGPS EQEAVAPCAVNGTCEAPLGTSTVGLIY                                           GKFHGAC TGPGADPIDAPEAPWPGTCGD +S TFGRAENTFTSGFEGQWTVEPLVWDN+YFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSD+ALL DPEYLAL ELFASDQA LD AFAA+WYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAP DLPD+DGA SAI  ILSSDPSYPALFVTLAWQCAST+R+TD+LGGCNGARIRFSPEKDWAGNQGLD+
Sbjct:    1 MRRTCEIGVLAALALFATPTFGGCPFLSGQN--EDAMNPGGDRALMSSSSSYD---SSSGGADFSSETYQALQADITTMFTDSQDFWPADFGNYAPFMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKSLTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRQDDASGVDSLELGPSPEQEAVAPCAVNGTCEAPLGTSTVGLIY-------------------------------------------GKFHGACATGPGADPIDAPEAPWPGTCGDANSTTFGRAENTFTSGFEGQWTVEPLVWDNEYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDIALLNDPEYLALVELFASDQAALDEAFAASWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPVDLPDSDGAASAIVGILSSDPSYPALFVTLAWQCASTFRATDYLGGCNGARIRFSPEKDWAGNQGLDE 459
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BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: D8LN39_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN39_ECTSI)

HSP 1 Score: 752 bits (1941), Expect = 1.800e-254
Identity = 386/607 (63.59%), Postives = 428/607 (70.51%), Query Frame = 1 
Query:   37 MGHKCRLGVLAALAFIASPASAGCPFLSGEKGSQADLNPGVDRALGSYDDDGSYYGGADFSRETYEALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAVAPCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGMNDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGLDQVLSLLSPVQDDYSDVSYADLIVLAGNLALEIDLSFCAGRVDVTEGDDLISVLEPREYDDVIVGVRDRMRIRGLSVAQMVALAGRPRSASHMIALGFSGSYTSDE 1857
            MG  C L  LA  A +A  AS GCPFLSG+K   + +  G +R L    DDG + GGAD+SRETYEA+Q DI +MF +S DFWPADFGNY PL IRLAWHC G+YR SDGRGGCDGGRIRF PE  WADNTNLDKALTLLQPIKLKYGDA+SW DLITLTG+ AI +MGGP+LGFCAGR DD +G DSL LGP+ EQEA APCAVNGTCE PLGTSTVGLIYVNP GP GVPDP  SA  IR+VF RMGMND+ETVALIGGGHAFGK HGAC +GPG DP DAPEAPWPGTCGD DSATFGRAENTFTSGFEG WT EP VWDN YF DLLEYDW+  ESPA  +QW PVLKE ATET+  +PDIIMLTSDVALL DPEYLA+ E FA+DQ  LD AF+ AWYKL +RDMG   RCVGTDV PPQ+FQLPL + P DLP   GAK AI  ILS + +Y  LFVTLA+QCAST+RSTD++GGCNGARIRF P+ +WA N GL                                                                           +VAQMVALAGRPRS+S M  LG+SGSYT D+
Sbjct:   63 MGRTCNLVWLAGFALVARTASGGCPFLSGQKDLGSRI--GGERLLSGDHDDG-HEGGADYSRETYEAIQADIVSMFVDSKDFWPADFGNYGPLFIRLAWHCAGSYRASDGRGGCDGGRIRFFPEHGWADNTNLDKALTLLQPIKLKYGDAISWADLITLTGDMAISSMGGPILGFCAGRQDDDSGYDSLELGPTPEQEATAPCAVNGTCELPLGTSTVGLIYVNPGGPMGVPDPEASAPQIREVFSRMGMNDTETVALIGGGHAFGKVHGACPSGPGPDPFDAPEAPWPGTCGDPDSATFGRAENTFTSGFEGAWTEEPTVWDNSYFVDLLEYDWIQAESPAGNIQWIPVLKEDATETD--VPDIIMLTSDVALLMDPEYLAIVEEFAADQYALDIAFSNAWYKLVTRDMGPHSRCVGTDVPPPQEFQLPLADTPKDLPSYSGAKEAIGRILSEESTYAPLFVTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGLS--------------------------------------------------------------------------TVAQMVALAGRPRSSSFMTGLGYSGSYTEDD 590
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BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: D7G7J0_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J0_ECTSI)

HSP 1 Score: 732 bits (1889), Expect = 1.610e-248
Identity = 358/502 (71.31%), Postives = 403/502 (80.28%), Query Frame = 1 
Query:   37 MGHKCRLGVLAALAFIASPASAGCPFLSGEKGSQADLNP-GVDRALGSYDDDGSYYGGADFSRETYEALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAVAPCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGMNDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGL 1539
            MG  C L  LA  A +   AS GCPFLSG++  Q   N  G +R L +   D  Y  GAD+SRETYEA++ DI A+F +S DFWPADFGNYAPLMIRLAWHC G+YR SDGRGGCDGGRIRF PE  WADNTNLDKALTLL PIKLK+GDA+SWGDLITLTG+ AI +MGGP+LGFCAGR DD++G DSL LGP++EQEA APCAVNGTCE PLGTSTVGLIYVNP GP GVP+P  SA  IR+VF RMGMND+ETVALIGGGHAFGK HGAC TGPGADPIDAPE PWPGTCGD DS TFG+ +NTFTSGFEG WT EP VWDN YF DLLEYDW+  ESPA  +QW PVLKE ATET+  +PDIIMLTSDVALL D EYLA+ E FAS+Q  LD AF+ AWYKL +RDMG + RCVGTDV PPQDFQLPLP+ PTDLP +  AK AI  IL +D +Y +L VTLA+QCAST+RSTD++GGCNGARIRF P+ +WA N GL
Sbjct:    1 MGRTCNLVRLAGFALVTGIASGGCPFLSGQEDQQQLGNHIGGERLLST---DSGYEEGADYSRETYEAIKADILAVFVDSKDFWPADFGNYAPLMIRLAWHCAGSYRNSDGRGGCDGGRIRFFPEHGWADNTNLDKALTLLTPIKLKHGDAISWGDLITLTGDMAISSMGGPILGFCAGRQDDSSGYDSLELGPTEEQEATAPCAVNGTCEVPLGTSTVGLIYVNPGGPMGVPEPTESAPQIREVFARMGMNDTETVALIGGGHAFGKVHGACPTGPGADPIDAPEDPWPGTCGDPDSDTFGKGDNTFTSGFEGAWTEEPTVWDNHYFIDLLEYDWIQDESPAGNIQWIPVLKEDATETD--VPDIIMLTSDVALLMDTEYLAIVEEFASNQEALDVAFSNAWYKLVTRDMGPYTRCVGTDVPPPQDFQLPLPDKPTDLPSSTEAKRAIGRILEADSTYASLLVTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGL 497
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BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: A0A8J4B542_9CHLO (PEROXIDASE_4 domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B542_9CHLO)

HSP 1 Score: 725 bits (1872), Expect = 6.350e-243
Identity = 364/648 (56.17%), Postives = 443/648 (68.36%), Query Frame = 1 
Query:  235 ALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAVAPCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGMNDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQSIL------------SSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGLDQVLSLLSPVQDDYSDVSYADLIVLAGNLALEI----DLSFCAGRVDVTEGDDLISVLEPREYDDVIVGVRDRMRIRGLSVAQMVALAGRPRSASHMIALGFSGSYTSDEPPALSNAFYVTLLTETWEKVPGSDGQ-EYQAVGTSGVYVLATDLALVWDPEFKAQTVMYAEDNDQFLKEFASAWTAVMNADRYDGPTGNVC 2127
            A++ D+ A+F +S + WPADFG+Y PLMIR+AWHC G+YR SDGRGGCDG R RF+PERSWADN NLDKA  LL PIK KYGDA+SWGDLI L G+ AI +MGGP+LGFCAGR+DDA+G  SL LGPS +QE VAPC+VNG CEAPLG ST+ LIYVNPEGP  VPDP  SA  IR+VF RM MNDSETVALIGGGHAFGK HGAC TGPG +P+  P  PWPGTCG+      G+  NTFTSGFEG WT  P+ WDN+YF +LL+YDW +   P    QW PVLKE A + ED++PDIIMLT+DVALL DP YL L +LFA++Q  LD AF+ AWYKL +RDMG + RC+G  V PPQ FQ PLP  P  +PD      AI   L            +  P Y ALF TLAWQCAS++R TD+ GGCNGARIR +P+KDW  N  +D+VL +L P++D +  ++YADLIVLAGN AL       + FC GR D    +  ++V   R ++D +V ++D   + GL+  + VAL    RS S    LG+SGS+T D P  LSN F+  LL   W  V  + GQ E +AVG  GVY++  DLA+ WDP F A    +  D+  F   FAS W  +MNADR+ GP GN C
Sbjct:   66 AVKADLKALFVDSQESWPADFGHYGPLMIRMAWHCAGSYRLSDGRGGCDGARQRFDPERSWADNVNLDKARGLLWPIKQKYGDALSWGDLIILAGDTAIESMGGPILGFCAGRIDDADGAASLPLGPSLDQEMVAPCSVNGECEAPLGASTMSLIYVNPEGPLAVPDPELSAPQIREVFSRMAMNDSETVALIGGGHAFGKTHGACPTGPGPNPMQQPWNPWPGTCGE--GPMKGKGNNTFTSGFEGPWTTNPIRWDNEYFVNLLKYDWKVYVGPGGHHQWEPVLKEDA-DPEDDLPDIIMLTTDVALLKDPIYLELVKLFAANQTALDIAFSHAWYKLVTRDMGPYSRCLGDQVPPPQPFQAPLPPPPAKIPDYKAVTKAITKALRVISPALPYDPVNGKPYYGALFATLAWQCASSFRQTDYTGGCNGARIRLAPQKDWPQNVAMDKVLKVLEPIKDSFPGLTYADLIVLAGNTALTDAKAKGMRFCGGRSDADSDEPPVTVTPQRVFNDKLVQLKDNAIVMGLTFREAVALKAMIRSPSQQQRLGYSGSWT-DNPTRLSNEFFKVLLDNDWVNVTSAAGQLEMKAVGKEGVYMMPCDLAIKWDPVFAAIAQEFVTDSTAFYTAFASGWNKMMNADRFKGPAGNEC 709
[Close]
BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: A0A8J4G544_9CHLO (PEROXIDASE_4 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4G544_9CHLO)

HSP 1 Score: 725 bits (1871), Expect = 8.070e-243
Identity = 363/648 (56.02%), Postives = 448/648 (69.14%), Query Frame = 1 
Query:  235 ALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAVAPCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGMNDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQSIL------------SSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGLDQVLSLLSPVQDDYSDVSYADLIVLAGNLALEID----LSFCAGRVDVTEGDDLISVLEPREYDDVIVGVRDRMRIRGLSVAQMVALAGRPRSASHMIALGFSGSYTSDEPPALSNAFYVTLLTETWEKVPGSDGQ-EYQAVGTSGVYVLATDLALVWDPEFKAQTVMYAEDNDQFLKEFASAWTAVMNADRYDGPTGNVC 2127
            A++ D+ A+F +S + WPADFG+Y PLMIR+AWHC G+YR SDGRGGCDG R RF+PERSWADNTNLDKA  LL PIK KYG+A+SWGDL+ L G+ AI +MGGP+LGFCAGR+DD +G  SL LGPS +QE VAPC+VNG CEAPLG ST+ LIYVNPEGP  VPDP  SA  IR+VF RM MNDSETVALIGGGHAFGK HGAC TGPG  P + P  PWPGTCG+      G+  NTFTSGFEG WT  P+ WDN+YF++LL+YDW +   P    QW PV K GA + EDE+PDIIMLT+DVALL DP YL L +LFA++Q  LD AF+ AWYKL +RDMG + RC+G  V PPQ FQ PLP  P+   D      AI   L            +  P Y ALF TLAWQCAS++R TD+ GGCNGARIRF+P+KDW  N  +D+VL +L P++D +  ++YADLIVLAGN AL       + FC+GR D    +  ++V  PR +++ +V V+D  ++ GL+  + VAL    RS S    LG+SGS+T+D P  LSN F+  LL+  W     + GQ E +AVG  G+Y++  DLA+ WDP F A    YA D+  F   FAS W  +MNADR+ GP GN+C
Sbjct:   64 AVKADLKALFVDSQESWPADFGHYGPLMIRMAWHCAGSYRLSDGRGGCDGARQRFDPERSWADNTNLDKARGLLWPIKEKYGEALSWGDLMILAGDTAIESMGGPILGFCAGRIDDTDGTASLPLGPSLDQEMVAPCSVNGECEAPLGASTMSLIYVNPEGPLAVPDPELSAPQIREVFARMAMNDSETVALIGGGHAFGKTHGACPTGPGPSPAEQPWNPWPGTCGN--GTMKGKGNNTFTSGFEGPWTTNPIRWDNEYFQNLLKYDWEVYIGPGGHHQWEPVRKPGA-DPEDELPDIIMLTTDVALLKDPIYLELVKLFAANQTALDIAFSHAWYKLVTRDMGPYSRCLGNQVPPPQPFQSPLPPPPSVTLDYKAITKAITKALRTVSPAIVGDQVNGKPYYGALFATLAWQCASSFRQTDYTGGCNGARIRFAPQKDWPQNVAMDKVLEVLQPIKDSFPGLTYADLIVLAGNTALTDAKAKRMKFCSGRSDADPSEPPVTVYPPRVFNNKLVQVKDNAQVMGLTPREAVALKALIRSPSQQQRLGYSGSWTND-PSRLSNEFFKVLLSNDWVNTTSAAGQLEMKAVGKEGIYMMPCDLAIKWDPVFAAIAQEYASDSYAFYLAFASGWNKMMNADRFKGPAGNMC 707
[Close]
BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Match: A0A8J4F3U4_9CHLO (PEROXIDASE_4 domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F3U4_9CHLO)

HSP 1 Score: 719 bits (1856), Expect = 1.390e-240
Identity = 363/649 (55.93%), Postives = 446/649 (68.72%), Query Frame = 1 
Query:  232 EALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAVAPCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGMNDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAI-------QSILSSD-----PSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQGLDQVLSLLSPVQDDYSDVSYADLIVLAGNLALEI----DLSFCAGRVDVTEGDDLISVLEPREYDDVIVGVRDRMRIRGLSVAQMVALAGRPRSASHMIALGFSGSYTSDEPPALSNAFYVTLLTETWEKVPGSDGQ-EYQAVGTSGVYVLATDLALVWDPEFKAQTVMYAEDNDQFLKEFASAWTAVMNADRYDGPTGNVC 2127
            +A++ D+ A+F +S D WPADFGNY PLMIR+AWHC G YRQSDGRGGCDGGR RF+PERSWADN NLDKA  LL PIK KYG+A++WGDLI L G+ AI +MGGP+LGFCAGR+DDA+G  SL LGPS +QE VAPC+VNG CEAPLG ST+ LIYVNPEGP  VPDP  SA  IR+VFGRM MNDSETVALIGGGHAFGK HGAC TGPG  P   P  PWPGTCG+      G+  NTFTSGFEG WT  P+ WDN+YF++LL+YDW +   P    QW PV K+ +    D + +I+MLT+DVALL DP YL L +LFA++Q  LD AF+ AWYKL +RDMG + RC+G  V PPQ FQ PLP  P   PD    + AI        S L +D     P Y ALF TLAWQCAS +R TD+ GGCNGARIRFSP+KDW  N  +D VL++L P++  +  ++YADLIV AG+ AL       L FC+GR D +  +       PR + + +V ++D  ++ GL+  +MVAL  R RS S    LG+SGS+T D P  L+N ++  LL   W  V  + GQ E +AVGT GVY++ TDLA+ WDP F      +A D + FL+ FA+ W  +M ADR+ GPTGN C
Sbjct:   64 DAVKADLKALFLDSKDSWPADFGNYGPLMIRMAWHCAGTYRQSDGRGGCDGGRQRFDPERSWADNVNLDKARGLLWPIKQKYGNALTWGDLIILAGDAAIESMGGPILGFCAGRVDDADGTASLPLGPSLDQEMVAPCSVNGECEAPLGASTMSLIYVNPEGPMAVPDPELSAPQIREVFGRMSMNDSETVALIGGGHAFGKVHGACPTGPGPSPAQQPWNPWPGTCGE--GPMKGKGNNTFTSGFEGPWTTNPIRWDNEYFQNLLKYDWEVHVGPGGHHQWRPVNKDASDP--DPVANIMMLTTDVALLKDPIYLELVKLFAANQTALDIAFSHAWYKLVTRDMGPYSRCLGDQVPPPQPFQAPLPPPPATKPDFKAVEKAITKALRTASSALPADMVGGKPYYGALFATLAWQCASNFRQTDYTGGCNGARIRFSPQKDWPQNVAMDSVLAVLEPIKASFPGLTYADLIVQAGSTALTNAKARKLKFCSGRSDASPDETPFPFQPPRVFSNKLVQLKDNAQVMGLTSREMVALQARLRSPSQQRRLGYSGSWT-DNPSLLTNEYFKVLLNNDWVNVTSAAGQLEMKAVGTEGVYMMPTDLAVKWDPVFATIAQEFATDANAFLEAFAAGWNKLMIADRFKGPTGNEC 707
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXZ4_9PHAE0.000e+089.08KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G6M6_ECTSI0.000e+090.32Catalase decomposes hydrogen peroxide to molecular... [more]
D7G523_ECTSI0.000e+088.74PEROXIDASE_4 domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JAJ7_9PHAE1.280e-29390.00KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FTZ8_ECTSI5.200e-27579.09Catalase decomposes hydrogen peroxide to molecular... [more]
D8LN39_ECTSI1.800e-25463.59Catalase is an enzyme, present in all aerobic cell... [more]
D7G7J0_ECTSI1.610e-24871.31Catalase is an enzyme, present in all aerobic cell... [more]
A0A8J4B542_9CHLO6.350e-24356.17PEROXIDASE_4 domain-containing protein n=2 Tax=Vol... [more]
A0A8J4G544_9CHLO8.070e-24356.02PEROXIDASE_4 domain-containing protein n=1 Tax=Vol... [more]
A0A8J4F3U4_9CHLO1.390e-24055.93PEROXIDASE_4 domain-containing protein n=1 Tax=Vol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig104contigEcto-sp6_S_contig104:212583..219533 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score938.3
Seed ortholog evalue2.1e-270
Seed eggNOG ortholog2880.D7G523
Preferred namekatG
Model size3889
KEGG rclassRC00034,RC00213,RC00767,RC02141
KEGG koko:K03782
KEGG ReactionR00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906
KEGG Pathwayko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009636,GO:0009987,GO:0009991,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019953,GO:0020037,GO:0022414,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034599,GO:0034605,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042594,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0071496,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748
Exons7
EggNOG free text desc.catalase activity
EggNOG OGs2QTDY@2759,COG0685@1
Ec32 ortholog descriptionCatalase
Ec32 orthologEc-26_000310.1
EC1.11.1.21
Cds size2172
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig104.942.1prot_Ecto-sp6_S_contig104.942.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig104 214721..219497 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348745.9373221-UTR-Ecto-sp6_S_contig104:212582..2142631682348745.9373221-UTR-Ecto-sp6_S_contig104:212582..214263Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig104 212583..214263 -
1682348746.0055397-UTR-Ecto-sp6_S_contig104:219497..2195331682348746.0055397-UTR-Ecto-sp6_S_contig104:219497..219533Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig104 219498..219533 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348745.9496453-CDS-Ecto-sp6_S_contig104:214720..2153831682348745.9496453-CDS-Ecto-sp6_S_contig104:214720..215383Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 214721..215383 -
1682348745.958679-CDS-Ecto-sp6_S_contig104:215758..2161391682348745.958679-CDS-Ecto-sp6_S_contig104:215758..216139Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 215759..216139 -
1682348745.9680145-CDS-Ecto-sp6_S_contig104:216584..2169161682348745.9680145-CDS-Ecto-sp6_S_contig104:216584..216916Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 216585..216916 -
1682348745.9774556-CDS-Ecto-sp6_S_contig104:217393..2175221682348745.9774556-CDS-Ecto-sp6_S_contig104:217393..217522Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 217394..217522 -
1682348745.986543-CDS-Ecto-sp6_S_contig104:218010..2185841682348745.986543-CDS-Ecto-sp6_S_contig104:218010..218584Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 218011..218584 -
1682348745.9961267-CDS-Ecto-sp6_S_contig104:219404..2194971682348745.9961267-CDS-Ecto-sp6_S_contig104:219404..219497Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 219405..219497 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig104.942.1

>prot_Ecto-sp6_S_contig104.942.1 ID=prot_Ecto-sp6_S_contig104.942.1|Name=mRNA_Ecto-sp6_S_contig104.942.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=724bp
MGHKCRLGVLAALAFIASPASAGCPFLSGEKGSQADLNPGVDRALGSYDD
DGSYYGGADFSRETYEALQEDITAMFTNSMDFWPADFGNYAPLMIRLAWH
CNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDA
VSWGDLITLTGNEAIRTMGGPVLGFCAGRLDDANGVDSLALGPSDEQEAV
APCAVNGTCEAPLGTSTVGLIYVNPEGPSGVPDPAGSAESIRDVFGRMGM
NDSETVALIGGGHAFGKFHGACDTGPGADPIDAPEAPWPGTCGDVDSATF
GRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPV
LKEGATETEDEIPDIIMLTSDVALLFDPEYLALCELFASDQAYLDTAFAA
AWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTDGAKSAIQS
ILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPEKDWAGNQG
LDQVLSLLSPVQDDYSDVSYADLIVLAGNLALEIDLSFCAGRVDVTEGDD
LISVLEPREYDDVIVGVRDRMRIRGLSVAQMVALAGRPRSASHMIALGFS
GSYTSDEPPALSNAFYVTLLTETWEKVPGSDGQEYQAVGTSGVYVLATDL
ALVWDPEFKAQTVMYAEDNDQFLKEFASAWTAVMNADRYDGPTGNVCDDV
SDDSDDSSSSSSDSSDDSSSDDH*
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mRNA from alignment at Ecto-sp6_S_contig104:212583..219533-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig104.942.1 ID=mRNA_Ecto-sp6_S_contig104.942.1|Name=mRNA_Ecto-sp6_S_contig104.942.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6951bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:212583..219533- (Ectocarpus species6 EcLAC_371)
AACAGCACAAAGTCTTGTCACCGTCAGCTGGCCATCATGGGTCACAAGTG
TAGGCTCGGGGTCCTGGCCGCGTTGGCGTTCATCGCTTCGCCTGCATCCG
CCGGCTGCCCGTTCCTCTCTGGCGAAAAGGTAAGATATAATCATGCTTGT
AAGTGCGGACGGACGCATGCCCCCGATGTACATACAGACTACGTTTTGTT
TTTCGTGTGCTTTTCGTTTACTCCAGCTGTGGGCGGTGGGAAACTGAACA
AATTGGGGTCGGATGCGAAAATTATCGGGAACTGCTGTAGCGTGTCGTTT
CGACGTTGCTGCTGCTGCTTTTCATCTCAGGTTACTTACTTGCTGGGGGA
AAGTGTTTTTCTTGCCATTCGTTCATGCCTGCAGTATTCTTGTCACCTCT
GTGTGGTAGACCTTCCAGGGGTTGGTCTTAGCCCTTAACCGTTGAACCCT
TTGACCAAGCTCCCGTCTTCGTGCAGCTGCCCTTGTCGTGTGCGCTCTGT
CACGCTGTAGTGGTGGGGCGCAAGTGTTTTTCCCGTTCTTGTTTCGGATC
GGTCAAAATACCTCGAGCGTCGAATCGTCGCACACCTACGCCGTTGTTCT
TCCTCGAGATGCCCCCAGTCAGCGAAAGGTGCCAAAAATATAGCTTTGGC
CTGGAACCAGGGGTCGCTATTCCCCGACAAACACGCAATATAACAACAAA
CTTTGCATGCGCTTGTGTTACTGACTGCTTTGGTGAGGTCATAGGGTTCA
GCTTTGACGCTCAGACAGACGAGTGCGATGAGATTCAGCCTTGACTCGCC
TATTGAATATGCACGCTCTCTTCGATCAACGGGGTTGATCATACCGTACC
CTTCACCAGGCTTCCCGGTGAAATATTCTGGACAATGTTCTGTGTGCACC
TCCCTCCAACCGCCTCTCCGCCCTGCTCTCCCGTACCCACGCTTCACAGG
GCTCGCAAGCCGACCTGAACCCCGGCGTGGACCGTGCTCTGGGGTCCTAC
GACGATGATGGCAGCTACTACGGAGGTGCGGACTTCTCCCGCGAGACCTA
CGAGGCTCTTCAAGAGGACATCACGGCCATGTTCACCAACTCCATGGACT
TCTGGCCGGCCGACTTCGGCAACTATGCTCCCCTGATGATCCGCCTCGCC
TGGCACTGCAACGGCAACTACCGCCAGTCGGACGGCCGCGGCGGCTGCGA
CGGTGGCCGGATCCGCTTCAACCCGGAACGCAGCTGGGCGGACAACACCA
ACCTAGACAAGGCGCTGACGCTCCTGCAGCCCATCAAGCTCAAGTACGGC
GACGCCGTCTCGTGGGGAGACCTCATCACCCTGACGGGTAACGAGGCGAT
CCGGACGATGGGCGGGCCCGTGTTGGGGTTCTGCGCCGGAAGGCTTGACG
ATGCAAATGGCGTCGACAGCCTCGCGCTGGGCCCCTCTGACGAGCAGGAG
GCCGTCGCTCCTTGCGCCGTCAACGGGACTTGCGAAGCCCCTCTCGGCAC
CAGCACGGTGGGCTTGATCTACGGTGAGCAGTCTACTGCCGTACTTCGTT
TTTTGTGGGAATAGGTGGCTAGATGTTTGAAGCCGCAAAGCCCCAACACA
CCATAAGGTTGTTTTGGCTTTTGAAGACACATACCCCAACAACCTAGAGC
AAGTGTTGGAGCTTGCCCCCCCTTCAGCGACGTGTACCATAACACACGAT
TTCGTTATTCTCTCGCGGTACTCCTGAGGGCTCACGATCATTTCTCCGTG
CGCCAGCCAAGCTAGATGGCCTTAGCTCGGGTATTGCTCAGCAGTATTGA
CGAGTCGACCATTCCTTATGGCCGTCGTACAACCACGTACAACCGCGGAA
AGCGTCCGCATCAGTTGGGCCCGTACGGATAGTGGAAGCTGCTGAGCGGA
GACCATAACGTTTCTATTCATGTTGACAACAACATCGCGTTTCTGACGCA
AGTCACTCATATGTACCCTCCCTTTTGAACCCCTCACTGTAACTGTATGT
ATGTACCCCAGTGAACCCCGAGGGGCCCTCCGGCGTTCCCGACCCCGCGG
GCAGCGCTGAAAGCATCCGGGATGTCTTCGGGCGGATGGGCATGAACGAC
AGCGAGACAGTGGCTCTAATCGGTGGAGGGCACGCCTTCGGTGAGTTAGT
TTGTATAGGTTGGCCGTGTCAGAGGCGGCAACGTACCATATACTAAACTG
TGGTTTGTTCAGTACGCATCGATCCGGCAGGCGTCAACCTTCTTGTCTGT
AGAAGCGCCTCGGCAGCTAGACACGTAGGCGGGTACACGGGTGACTGCTC
AAAGAAGCGTCCGGGCGGTCGATTCGTGCCTGCGTTGCACGTCTATTTCG
CTGCAGGTCCCCTTCCCGAACGTTTCGTCATCATCATTGATACAGACTCC
ATAGTTCCCAAACTCCCAAAAACCCGATCTCCCGCGCCCCTCTCCAACCT
ACCCAAGAGATGGGATCTCCGCGGCCCAAAGCAATCACCGTGTCTCTCAC
TGGCTTCGGAACTCCTCTTCCTCTTTGAGGGTGCTTCAGTGGTATCTGCA
CTCGCATCGCTGACTGTTTCGTTCCCCCATACGTTGTGTGTACGATCTTC
CCCTCGGCTCCTGACAGGAAAGTTCCACGGCGCGTGCGACACCGGGCCCG
GCGCCGACCCGATCGACGCCCCCGAAGCCCCCTGGCCGGGAACATGCGGC
GACGTCGACTCCGCGACCTTCGGCCGCGCCGAGAACACCTTCACGAGCGG
GTTCGAGGGCCAGTGGACGGTGGAGCCCCTGGTGTGGGACAACCAGTACT
TCAAGGACCTGCTCGAGTACGACTGGGTGATGACGGAAAGCCCCGCAGAC
CTCGTGCAGTGGTTCCCGGTCCTGAAGGAGGGAGCCACCGAGACGGAGGA
CGAGATCCCCGACATCATTATGCTCACCAGCGACGTCGCCTTGTTGTTTG
TGAGAGCGAAAGCGTCGGGTGTTTTTTTTTATCGCCTGCGTAAAGACTGA
ACGCTCAACACCCCGACGAACGGCCTACGTAGAATGTCGAACGGCTAACC
GAGATAGAACGTGAGCTCCGCCGTTGAGACGTAAGGACTTTGTAGATTCC
CTCGATGGTGTTCAGAGCTTTGTTTGCGCGATACTACAGTATGTTCTCCA
CGAACTATCTCGCAGCGATCTCTTGTTCAGACGCTTCGACTCCGGACGTG
TGACAATACAAAACTGTTCATATATTCAACATTGCCCGTCAGGAAAATAG
CAGTATCAGTCGAAAGAATCCACACTACAATACTGTAGTCCACAATACTG
TAGTCCACAACGTACGACAAACAAGTGAAAGGTTGAGTCGAAAAATTAAC
ACAGGTCTCCATCCGCACCATGCTGTCGCCCACTGCCCGCGCAGGACCCG
GAATACCTCGCCCTTTGCGAACTCTTCGCCAGCGACCAGGCCTACCTTGA
CACCGCCTTCGCCGCGGCTTGGTACAAGCTCACCTCTCGTGACATGGGCC
AGTTCCAGCGCTGCGTGGGCACCGACGTGGCGCCGCCTCAGGACTTCCAG
CTGCCGCTCCCGGAGGCGCCCACCGACCTCCCCGACACCGACGGGGCCAA
GTCGGCGATCCAGAGCATCCTGTCCAGCGACCCGTCCTACCCCGCCCTCT
TCGTCACCCTGGCCTGGCAGTGCGCGTCCACCTACCGCTCGACCGACTTC
TTGGGCGGCTGCAACGGGGCGAGGATCCGATTCTCTCCCGAGAAGGACTG
GGCCGGAAACCAGGGTCTCGACCAGGTGAGAGGTGTAAGAGTCGATGGCA
CATGGTTGTTTGTTTTTGCTGACGTTGGAAAGAACTTCTGTACGAAGACG
TTTCGACTGCGATTGTTGGTTCTGCCACCGGTCGTATCGGTGTGGATAAT
CTGTGTTGTCTGCCTTACTTGTTTGGAGTATCTATAGCAGCAGTAATATG
ACTTTCGGCTTCATCACCTCCTGACGTCGCTTTGTCTAGCAAACACGGTC
CCGCTGAGCCAATATCAATACCTATGCCGTGCGCGATAGGCAAGCTTGGC
ACAACACGAAGCCGATCGCAGTATGCATATATCCCCAGCTTCGCTCCTCC
TCACGGTGCCCGTCCCTGTCCCTGTCGCGCCCGTCAATCGCTGTGGATAG
GTTCTGAGCCTGCTCTCGCCGGTGCAAGACGACTACTCAGACGTGTCCTA
CGCCGACCTGATCGTGCTCGCGGGAAACCTCGCTCTCGAAATCGACCTGT
CGTTCTGCGCGGGCCGCGTGGACGTCACCGAGGGCGACGACCTCATCTCG
GTCCTCGAGCCCCGCGAGTACGACGACGTGATCGTGGGCGTGCGCGACCG
CATGAGGATCAGGGGCCTGTCGGTCGCGCAGATGGTGGCCCTCGCCGGCC
GCCCCCGCAGCGCCTCGCACATGATCGCCCTCGGCTTCAGCGGGTCCTAC
ACGAGCGACGAGCCCCCGGCCCTCTCCAACGCCTTCTACGTGACCCTCCT
CACCGAGACCTGGGAGAAGGTGCCCGGGTCCGACGGACAGGAGTACCAGG
CCGTCGGCACGTCCGGCGTCTACGTGCTAGCGACCGACCTGGCCCTTGTC
TGGGACCCGGAGTTCAAGGCCCAGACGGTCATGTACGCCGAGGATAACGA
CCAGTTCCTCAAGGAGTTCGCTTCGGCCTGGACCGCGGTGATGAACGCCG
ACCGTTACGACGGGCCCACTGGCAACGTCTGTGACGACGTCTCGGACGAC
TCCGACGACAGCAGCAGCAGCAGCAGCGACAGCTCTGACGACAGCAGCAG
CGACGACCACTAAGTGAGAACGTAGTGATACTAGGCCGGGGGGGCTTGCG
GTGAGGACCATGGCGTGGCAAGGACGACCGTACAGAGTTATTTCTCTGGT
CCAGTATAAATGTGCGCTTCTTCGCGTGTGTACCGGAACGTGTCTGGTTT
CCCCCTGATCTTCTGTGTCTGGTTTCCCGCTAATCTTGTTGTTCCCGCCG
CCGCCGCCCTCCCACTGCTGGTCGTCGTGGAAGCCGCGATCATCGTTTAT
TTGCAAAAGCGGGAGAGACGGGCAAACAGAGAGGACACGTTGCGAGGGTG
TTGAGGCACGGACAAGCTTCGTAAAAATACCATGTAGATAGAGGTGGATT
GCCCTTTCGAACGTCGGCAAAAATACACTAGCACAAGATGTCACTGCTGA
ACGTGACCCACCCACCGCGTTTTTCCGACTGTTGCTCCTCTCCTGGACGA
TGTTTCGCCATTTTTTTCAGCCGGACGAGTTCGGCGGCTCCCGACGCAAC
GTGTTCGTCTCCCCGCCGGCCTCTATTTCAGCTATAGCTGCTGACGTTCG
TTTAACACAGCAGCCGTGACGTGCTTGTAGTATTGATTTTGAGAAATTAT
TCATTCAAATAGAATAGTATCACAGGTGAAGGGGATGTGTTGAAGTCTTA
GCGGTGAGTTGGAAACCGGCTGGACACGGCTTTTTTAGGGTCTGTTTATG
CCCCAACACCGATTGTCTTATTAGTGATGCTAGCAGGTGCTAAATCATAA
AAAAACACAGCGGAAGTATCTACAATTTCGAACCTCCCGGTAGTCTTCTT
ACTGGGCCAGCGACAGAAATATCGGAAGAAACCCTCCGTTCCGTTTATGT
TTTGTGCAAGAGTGAGGTCGTGCACCGCTCGGTCATCCCTTTCGTTGAGA
GCAATTGGCCTCGATATGTTGCATCCAGCCTTGAGGCAGCAAGCGTGTTG
TTGTAGAGCGTTCCTGTTGAGAAGAGGTCGGCAGTAAAGCATCTGGAACT
CGTGGGCAATAAAAGAGAGACGGATTGTGAGGGCGTCATTGCGGCGAGTC
ATGCATGTTCTGTGGCCAAGCCTGGTTTCCCATGGCGGGTGCAGGCTTTT
GGGACTGAACGGCTTTGTGCGGCAAGCTTCCATGTGTCGTTGTGTACATC
AAATAGATGTGGCAGTATCAAACGGGGAAGAGGAGAGTCAAATCGGGATG
GCGTCTTTGTGAGGTCCATGCGTGTCATGAGTGTTTCCGTCTTGTGTTAC
CTTTGCATTTAATCGAAATTTTTGTGAACGCCGTGGGAATGTCATGTCGC
GGGATTCTTGTGCGTGCTGTAGCGGCACGTTTGAGCCGATGATAAAAGCG
TTGTGATTTGTAGAAAACAAGAATCGTTGAATCTGGCTACATGGAGGGTG
GCAATGACCTGGACTGGTCGGGTCCCGATCGATCGTGACTTATCTTCACA
GTGTTGCATCTTCGTTAGTGGCAGTTCCATTTGTCATGAAGAAGAGACCT
TTCAGGCGCTTCTGGTGTCTGAATACCTTCCGTTGAGTTCTTTCGCAATG
CGCACGACTCAACTGTAGACTATAAGCAGCACATCGAGTTAGGGAGACTC
CGAACCCCCACGGGTGCGAGCATCTACTGTAGTCCGTTTTCGCTTGGCCT
GGGTACACGTACTTTCGGCAAACTCTGTGGACGTGTCAGCTCTCAACACC
ATTTCGATGTGGTTGCCGTGGGGATAGCACCATTACCTCATGTCGCGGGA
GGGGCTCAACAAGTTCCGTCGCATCCAGTGTTTTCTCGGGAACAACTGTC
GAGATCGAAAGGCAATGACGCTCGTCGATGTAGAATAGTGTCGTAGACTA
TGCCGTAGACGGAAACAGTCGCGGACGATCTGTTCATTCCAGGTAGGCGT
TCTGTCGTAAAGTTAATGCTGTTTCAACTAAACTCTGAAATGTTGGCCTT
TCCGGCACGAGGTTGCTACGGCGGTATCTGACAACACAGTGTCAGACGGT
GGAGATCGCCCCACTCGCGCAACTCCTCCTCAGAAAATCCCCGGAAGTAA
TTAATTCATTGAGAATTTTGTGAATGGAATGAAAACGAATACTAATCGAT
TTCATTTATTTCCCGTAGGAGAGGACAAGAGACACCGTTCGGATGGCCGA
C
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:212583..219533-

>mRNA_Ecto-sp6_S_contig104.942.1 ID=mRNA_Ecto-sp6_S_contig104.942.1|Name=mRNA_Ecto-sp6_S_contig104.942.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2172bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:212583..219533- (Ectocarpus species6 EcLAC_371)
ATGGGTCACAAGTGTAGGCTCGGGGTCCTGGCCGCGTTGGCGTTCATCGC
TTCGCCTGCATCCGCCGGCTGCCCGTTCCTCTCTGGCGAAAAGGGCTCGC
AAGCCGACCTGAACCCCGGCGTGGACCGTGCTCTGGGGTCCTACGACGAT
GATGGCAGCTACTACGGAGGTGCGGACTTCTCCCGCGAGACCTACGAGGC
TCTTCAAGAGGACATCACGGCCATGTTCACCAACTCCATGGACTTCTGGC
CGGCCGACTTCGGCAACTATGCTCCCCTGATGATCCGCCTCGCCTGGCAC
TGCAACGGCAACTACCGCCAGTCGGACGGCCGCGGCGGCTGCGACGGTGG
CCGGATCCGCTTCAACCCGGAACGCAGCTGGGCGGACAACACCAACCTAG
ACAAGGCGCTGACGCTCCTGCAGCCCATCAAGCTCAAGTACGGCGACGCC
GTCTCGTGGGGAGACCTCATCACCCTGACGGGTAACGAGGCGATCCGGAC
GATGGGCGGGCCCGTGTTGGGGTTCTGCGCCGGAAGGCTTGACGATGCAA
ATGGCGTCGACAGCCTCGCGCTGGGCCCCTCTGACGAGCAGGAGGCCGTC
GCTCCTTGCGCCGTCAACGGGACTTGCGAAGCCCCTCTCGGCACCAGCAC
GGTGGGCTTGATCTACGTGAACCCCGAGGGGCCCTCCGGCGTTCCCGACC
CCGCGGGCAGCGCTGAAAGCATCCGGGATGTCTTCGGGCGGATGGGCATG
AACGACAGCGAGACAGTGGCTCTAATCGGTGGAGGGCACGCCTTCGGAAA
GTTCCACGGCGCGTGCGACACCGGGCCCGGCGCCGACCCGATCGACGCCC
CCGAAGCCCCCTGGCCGGGAACATGCGGCGACGTCGACTCCGCGACCTTC
GGCCGCGCCGAGAACACCTTCACGAGCGGGTTCGAGGGCCAGTGGACGGT
GGAGCCCCTGGTGTGGGACAACCAGTACTTCAAGGACCTGCTCGAGTACG
ACTGGGTGATGACGGAAAGCCCCGCAGACCTCGTGCAGTGGTTCCCGGTC
CTGAAGGAGGGAGCCACCGAGACGGAGGACGAGATCCCCGACATCATTAT
GCTCACCAGCGACGTCGCCTTGTTGTTTGACCCGGAATACCTCGCCCTTT
GCGAACTCTTCGCCAGCGACCAGGCCTACCTTGACACCGCCTTCGCCGCG
GCTTGGTACAAGCTCACCTCTCGTGACATGGGCCAGTTCCAGCGCTGCGT
GGGCACCGACGTGGCGCCGCCTCAGGACTTCCAGCTGCCGCTCCCGGAGG
CGCCCACCGACCTCCCCGACACCGACGGGGCCAAGTCGGCGATCCAGAGC
ATCCTGTCCAGCGACCCGTCCTACCCCGCCCTCTTCGTCACCCTGGCCTG
GCAGTGCGCGTCCACCTACCGCTCGACCGACTTCTTGGGCGGCTGCAACG
GGGCGAGGATCCGATTCTCTCCCGAGAAGGACTGGGCCGGAAACCAGGGT
CTCGACCAGGTTCTGAGCCTGCTCTCGCCGGTGCAAGACGACTACTCAGA
CGTGTCCTACGCCGACCTGATCGTGCTCGCGGGAAACCTCGCTCTCGAAA
TCGACCTGTCGTTCTGCGCGGGCCGCGTGGACGTCACCGAGGGCGACGAC
CTCATCTCGGTCCTCGAGCCCCGCGAGTACGACGACGTGATCGTGGGCGT
GCGCGACCGCATGAGGATCAGGGGCCTGTCGGTCGCGCAGATGGTGGCCC
TCGCCGGCCGCCCCCGCAGCGCCTCGCACATGATCGCCCTCGGCTTCAGC
GGGTCCTACACGAGCGACGAGCCCCCGGCCCTCTCCAACGCCTTCTACGT
GACCCTCCTCACCGAGACCTGGGAGAAGGTGCCCGGGTCCGACGGACAGG
AGTACCAGGCCGTCGGCACGTCCGGCGTCTACGTGCTAGCGACCGACCTG
GCCCTTGTCTGGGACCCGGAGTTCAAGGCCCAGACGGTCATGTACGCCGA
GGATAACGACCAGTTCCTCAAGGAGTTCGCTTCGGCCTGGACCGCGGTGA
TGAACGCCGACCGTTACGACGGGCCCACTGGCAACGTCTGTGACGACGTC
TCGGACGACTCCGACGACAGCAGCAGCAGCAGCAGCGACAGCTCTGACGA
CAGCAGCAGCGACGACCACTAA
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