mRNA_Ecto-sp6_S_contig104.941.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig104.941.1
Unique NamemRNA_Ecto-sp6_S_contig104.941.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A6H5L404_9PHAE (GAF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L404_9PHAE)

HSP 1 Score: 676 bits (1745), Expect = 1.170e-239
Identity = 364/388 (93.81%), Postives = 368/388 (94.85%), Query Frame = 1
Query:    1 MWTGCEVLQAIARNGGLVHLSKIRWQRSSSAAGLAFGAPSCRTVSARRVFSTAKRAKRGRGESGGTXXXXXXXXXXXXXXXXP-PTQAQLRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVATDNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYKGVDLAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNKPEGFDENDEKLVGMLAAHVGAFMGQVSEGRAGRHEYGEAVPLRRLPTPKN 1161
            MWTGCEVLQA ARNGGLVH SK+RWQR +SAAG AFGAPS R V ARRVFSTAKR KRG GESGGT     XXXXXXXXXXX  PTQAQLRTLFMHSA PMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEA ATRMGLPAPDLTLRQRGLRACKLAATSGAA GVVVGCILGMGTLLFMDTTHAEREKKQREMD+LFATILDDGHNIVGAAKCSLFFVDE EGELWTKVATDNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYY+GVDLAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNKPEGFDENDEKLVGMLAAHVGAFMGQVSEGRAGRHEYGEAVPLRRLPTPKN
Sbjct:    1 MWTGCEVLQATARNGGLVHFSKMRWQRPASAAGFAFGAPSRRPVCARRVFSTAKRTKRGIGESGGTTLSRSXXXXXXXXXXXXXPTQAQLRTLFMHSAAPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAFATRMGLPAPDLTLRQRGLRACKLAATSGAACGVVVGCILGMGTLLFMDTTHAEREKKQREMDSLFATILDDGHNIVGAAKCSLFFVDEAEGELWTKVATDNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYQGVDLAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNKPEGFDENDEKLVGMLAAHVGAFMGQVSEGRAGRHEYGEAVPLRRLPTPKN 388          
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A8J2F6T4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2F6T4_9DINO)

HSP 1 Score: 263 bits (672), Expect = 5.830e-78
Identity = 147/286 (51.40%), Postives = 187/286 (65.38%), Query Frame = 1
Query:  247 PPTQAQLRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVATDNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYKGVDLAMKTTTRNMLAVPVMSRSDEKDDGK----VIAVIEMMNKPEG-FDENDEKLVGMLAAHVGAFMGQV 1089
            PP    LR LF  SAVPMVGFG MDN VMI AGDLIDNT+GVKFGLATLTAAACGQV SDV GVCFGG V+A   ++GLP P LT  QR L   K  +T GA  GV+VGC LGM +LLFMD   AER KK +E+DT+FAT++ +G   +GA +CSLF V  E+  LWT+ AT   GE     +I +P    +VGE V  K ++NV D   +  + +  D A    T+ +L VPV S +DE+++ +    V+AV++++N   G F + D +  GMLA HVG F+ QV
Sbjct:  122 PPDSKTLRQLFFASAVPMVGFGFMDNMVMIQAGDLIDNTIGVKFGLATLTAAACGQVFSDVSGVCFGGVVDAFCLKLGLPVPQLTSAQRTLPLVKRWSTFGAVCGVIVGCTLGMTSLLFMDLEAAERAKKNQELDTIFATVVKEGSEALGAERCSLFVV--EDSVLWTRAATGLKGE----DIIKVPKEASLVGEAVLRKAVINVPDAYTHPKFNREHDKATGFRTKAVLCVPVFSENDEQEESQGGREVVAVVQLVNSKNGYFSDADLRAAGMLARHVGIFLDQV 401          
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A6U0JIP6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JIP6_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.740e-67
Identity = 126/282 (44.68%), Postives = 179/282 (63.48%), Query Frame = 1
Query:  250 PTQAQLRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVATDNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYKGVDLAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNKPEG------FDENDEKLVGMLAAHVGAF 1077
            PT+ QL  + + SA+PMVGFG MDN VMI AGDLIDN++G+ FGL+TLTAA  GQ +SDV G   GG V+A  +++ +P   L+  Q  L++ ++  T+G   GVV+GC+LGM +L FMDT   ERE+K RE+ T+F TI  DG  +V A +CSL+  D+++ ELWT+VA+      K G+++ IP  TG+ G  V+    +N+ D  +++ +   VD      TR+++AVP+M    E    +VI  I+M+NK         FDEND KL+ MLA HV AF
Sbjct:   45 PTRRQLMIVALRSAIPMVGFGFMDNIVMIQAGDLIDNSIGITFGLSTLTAAGFGQCISDVAGFTSGGLVDAAVSKLNMPTHGLSQAQLSLKSARIYHTAGGCVGVVIGCLLGMCSLFFMDTDKKERERKARELKTIFETITRDGSKLVSAERCSLWMHDQDKHELWTQVASGT----KKGEILRIPDNTGVAGAAVQEATTINILDAYEDSRFNPEVDQKTGFRTRSIIAVPIMQ--SEGSGSRVIGCIQMVNKKNSDFTDGVFDENDAKLLTMLAGHVKAF 320          
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A7R9U7C3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7C3_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.040e-66
Identity = 135/288 (46.88%), Postives = 184/288 (63.89%), Query Frame = 1
Query:  250 PTQAQLRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVAT------DNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYK-GVDLAMKTTTRNMLAVPVMSRSDEKD------DGK-VIAVIEMMNKPEG-FDENDEKLVGMLAAHV 1068
            P + QLR LF  +AVPMVGFG MDN VMI AGD ID+T+GV+FGLAT+TAAA GQ+ SDV GV FGG VEA   ++GLP P++T  QR +   K AA +G+  GVV GC+LGM  L  +D   AE  K+QRE++ +F T++ + H ++ A + SLF  D + GELW+K +       +++ E  T  LI I     ++GE  R  RL+N+ D SK+  +++  VDL     TRN+L  PV S  +  D      DGK VIAV+E++NK +G F  +DE++V MLA HV
Sbjct:   62 PNKKQLRDLFFAAAVPMVGFGFMDNTVMILAGDAIDSTIGVRFGLATMTAAAFGQICSDVSGVAFGGLVEAAFVKLGLPVPNMTQAQRRMPISKSAAMAGSIIGVVCGCLLGMVNLFALDLDAAEMAKRQRELNKIFRTVIAEAHQVLDAERASLFIYDRKRGELWSKASALANGQDESNAEEGTTNLIRISAQHSLLGEAARHARLINIEDCSKDARFHEFEVDLRAGFHTRNLLLCPVFSGVEAPDAATGGKDGKRVIAVLEVVNKEKGCFTPDDERVVRMLARHV 349          
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A7S4N214_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N214_9STRA)

HSP 1 Score: 231 bits (590), Expect = 3.790e-66
Identity = 124/283 (43.82%), Postives = 183/283 (64.66%), Query Frame = 1
Query:  250 PTQAQLRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVATDNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYKGVDLAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNKPEG------FDENDEKLVGMLAAHVGAFM 1080
            PT+ +L  + +HSA+PMVGFG MDN VMI AG++ID T+GV FGL+TLTAA  GQ VSDV G   GG V+A  T+M LP+  L+  Q  LR+ ++  T G   GVV GC+LGM +L FMDT  AE+ KK +E+ ++F  ++ DGH ++ A +C+L+  D E+ ELW+KVAT   G+     ++ IP +TG+ G  V+++ ++N+ D  ++  + K +D      TR++LAVPV     + ++GKVI  I+M+NK         FD ND K++ ML++HV  F+
Sbjct:  107 PTRRELLIVALHSAIPMVGFGFMDNLVMIQAGEMIDLTIGVTFGLSTLTAAGFGQCVSDVAGFTTGGLVDAAVTKMNLPSHGLSQAQLRLRSARVYHTVGGCIGVVTGCLLGMCSLFFMDTDRAEKLKKAKELTSIFEAVMTDGHKLIKAERCTLWMFDREKDELWSKVATGMKGD----NILRIPASTGVAGAAVKSEDIVNIHDAYEDDRFNKEIDQQTGYRTRSILAVPV-----KNEEGKVIGAIQMVNKKNEDGTDAVFDINDAKMMMMLSSHVSTFI 380          
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A813G1M1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G1M1_POLGL)

HSP 1 Score: 229 bits (583), Expect = 5.690e-66
Identity = 127/288 (44.10%), Postives = 183/288 (63.54%), Query Frame = 1
Query:  250 PTQAQLRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVATDNDGEIKTGKLITIPIT-TGIVGEVVRTKRLLNVADTSKNTNYYKGVDLAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNKPE------GFDENDEKLVGMLAAHVGAFMGQVS 1092
            PT+ QLR LF+ +AVP V FGI+D  V++ AGD IDNT+GVKFGL TL AAACGQV+SD CGV FGGT+EA+A ++GL  P LT  Q+ +      AT G   GV+VGC++GM  LL +D   AER KK++ + T+  T+++ G +++  ++ +L+ VDEE+ ELW+ +    +  +  G +I +P+T T I G V +    +N+ D +K+  + KGV  A     R+ML  PV+       +GKV+AVI++MNK +       F + D KL+GMLA H   FM Q+S
Sbjct:   42 PTRLQLRRLFVTAAVPFVAFGIVDQTVLLYAGDAIDNTMGVKFGLPTLAAAACGQVLSDTCGVTFGGTIEAMALKLGLQLPGLTDAQKRMGITTRIATLGGVCGVIVGCLIGMLNLLVIDLGAAERAKKEKALSTIMKTVMESGKSVLECSRATLWAVDEEKQELWSSIREHQEKNV--GNIIRVPLTSTSIAGWVAQNNEGVNIPDVTKDPRWSKGVKFADGFELRSMLCAPVVL------EGKVVAVIQLMNKNDKDGNSCAFLKEDVKLIGMLAHHTALFMEQLS 321          
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A8J1ZJD6_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZJD6_9DINO)

HSP 1 Score: 236 bits (602), Expect = 1.140e-65
Identity = 138/320 (43.12%), Postives = 182/320 (56.88%), Query Frame = 1
Query:  253 TQAQLRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVATDNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYKGVDLAMKTTTRNMLAVPVMSRSDEKDD-----------------------GK------------VIAVIEMMN--KPEGFDENDEKLVGMLAAHVGAFMGQVSEGR 1101
            T A  R LF+ SAVPM+GFG MDN VMI AGDLIDNT+GV  GLATLTAAACGQV SDV GVCFGG V+ +  ++GLP  DLT  QR L   K   T G+  GV+VGC LGM +LLFMD   A+R KKQ+E+DT+F T++ +G   +GA +CSLF VD E+ ELWT+ AT         ++I +P+   +VG  V    ++NV D  +++ + +  D      TRN+L VPV   S                            GK            V+AV++++N  +  GF + + +   MLA HVG F+ QV   R
Sbjct:  280 TSADKRKLFVSSAVPMIGFGFMDNMVMIQAGDLIDNTIGVHLGLATLTAAACGQVFSDVSGVCFGGVVDNLCAKLGLPVADLTTEQRQLPDAKRCVTFGSVCGVIVGCCLGMTSLLFMDLDAADRAKKQQELDTIFRTVIVEGSETLGAERCSLFVVDHEKQELWTRAATG------VKEIIKVPVDKSLVGTAVLEADVVNVPDVYRHSKFNRDHDDKTGFRTRNILCVPVFQHSPSTSSCSAVETSSEGTXXXXXXXXXXXTGKKPAVALSDPSENVVAVVQLVNSERKSGFADAEVRAAKMLARHVGIFLEQVESAR 593          
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A7S1UHG3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHG3_9STRA)

HSP 1 Score: 224 bits (571), Expect = 6.630e-64
Identity = 124/312 (39.74%), Postives = 183/312 (58.65%), Query Frame = 1
Query:  250 PTQAQLRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVAT-------DNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYK-GVDLAMKTTTRNMLAVPVMSRSDE----------------------KDDGKVIAVIEMMNKPEG-FDENDEKLVGMLAAHVGAFMGQVS 1092
            PT  QLR LF+++A PMVGFG MDN VMI AGD ID+T+GV+FGLAT+TAAA GQ+ SDV GV FGG VEA   +MGLP P++T  QR ++ CK  A  G+  GV++GC+LGM  L  +D    E  K+QRE++ +F T++ + H ++ A + SLF  D + GELW+  A        D+D    T  +  +     ++GE      ++N+ DT  +  ++   VDL     TRN++  PV +  +E                      K++ +VIAV+E+ NK EG F  +DE+++ M+A HV  F+ +++
Sbjct:   19 PTNKQLRALFLNAAAPMVGFGFMDNTVMILAGDYIDSTIGVRFGLATMTAAALGQICSDVSGVAFGGVVEAAFLKMGLPVPNMTSAQRRMKICKAYAMGGSIVGVIIGCVLGMLNLFALDLDAVEMAKRQRELNRIFRTVIAEAHEVLEAERASLFIYDRKRGELWSHAAHLEEGAEGDDDDADNTANVFRVSAGHSLLGEAALKGEIINIKDTEADDRFHDFEVDLRDGFVTRNLIICPVFAACEEQEAEEGAKAEGGVSNTEGNGGKKENRRVIAVLEVANKKEGSFTRDDERVIRMIARHVEVFLKEIA 330          
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A7S2WKW4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WKW4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.480e-63
Identity = 126/283 (44.52%), Postives = 179/283 (63.25%), Query Frame = 1
Query:  250 PTQAQLRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVATDNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYKGVDLAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNKPEG------FDENDEKLVGMLAAHVGAFM 1080
            PT  QLR + + SA+PMVGFG MDN VMI AG+ ID T+GV FGL+TLTAA  GQ VSDV G   GG V+A  +++ LP  +L+L Q GLR  ++  T+G   GVV GC+LGM +LLFMDT  AER KK +EM ++F T++D GH ++ A +CSL+ +D+E  +LW+ VAT    EI+      I  + G VG      +++N++D   ++ +   +D     TTR++L VPV     + DDG+VI V++M+NK         F+ +D ++V MLA HV  F+
Sbjct:   65 PTDRQLRIVALRSAIPMVGFGFMDNLVMIQAGEFIDLTIGVTFGLSTLTAAGFGQCVSDVAGFTSGGVVDASVSKLKLPHHNLSLAQLGLRRSRIYLTAGGCVGVVFGCLLGMTSLLFMDTNKAERMKKAKEMKSIFNTVMDAGHKLILAERCSLWVLDKETNDLWSNVAT-GIAEIR------IKQSQGFVGSCASMGQVINISDAYNDSRFNPAIDKESGFTTRSVLCVPV-----KDDDGEVIGVVQMINKKNEDGTNAVFESSDIRVVEMLALHVNCFI 335          
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Match: A0A0G4FEZ4_VITBC (GAF domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FEZ4_VITBC)

HSP 1 Score: 217 bits (552), Expect = 2.320e-61
Identity = 126/283 (44.52%), Postives = 182/283 (64.31%), Query Frame = 1
Query:  247 PPTQAQ-LRTLFMHSAVPMVGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGGTVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLLFMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWTKVATDNDGEIKTGKLI--TIPITTGIVGEVVRTKRLLNVADTSKNTNYYKGVDLAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNK--PEGFDENDEKLVGMLAAHVGAFM 1080
            PP  A+ LRT F+ +AVP++GFG MDN +M+ AG+LID+TLGV FGLATLTAAA GQ+ SD  G+ FGG +EA+A R+GLP P++T  QR     K+  T+GAA GV  GC+LGM  LLFM+   AER+KKQ+E+DT+F  ++ DG  +    + +LF  D+ + ELW+KV +   GE +  +++  T     G    V   K ++NV +  K+  +   VD      TR++LA PV+     ++DG+V  VI ++NK   +GF ++DE+++ MLA HV  FM
Sbjct:   10 PPVPAKDLRTQFVCAAVPLIGFGFMDNTIMLRAGELIDSTLGVTFGLATLTAAAVGQLCSDTSGIVFGGWIEAMAQRLGLPTPNVTPAQRQQIPFKVVTTAGAAVGVCFGCLLGMANLLFMNVDKAERQKKQKELDTIFEMVMSDGPKMFDCERVTLFLYDKSKEELWSKVVS---GEQEGFQIVLKTNAAEQGFTRWVFYNKTIVNVREARKDARFDPSVDHRTGFVTRSVLAGPVV-----REDGEVDGVIMLLNKHNSKGFTKDDERMLRMLANHVRIFM 284          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L404_9PHAE1.170e-23993.81GAF domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A8J2F6T4_9DINO5.830e-7851.40Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A6U0JIP6_9STRA1.740e-6744.68Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7R9U7C3_9STRA1.040e-6646.88Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S4N214_9STRA3.790e-6643.82Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A813G1M1_POLGL5.690e-6644.10Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A8J1ZJD6_9DINO1.140e-6543.13Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A7S1UHG3_9STRA6.630e-6439.74Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WKW4_9STRA1.480e-6344.52Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A0G4FEZ4_VITBC2.320e-6144.52GAF domain-containing protein n=1 Tax=Vitrella bra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig104contigEcto-sp6_S_contig104:180350..186464 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score716.5
Seed ortholog evalue6.9e-204
Seed eggNOG ortholog2880.D7G6S1
Preferred nameTMEM65
Model size1968
Hectar predicted targeting categoryother localisation
GOsGO:0003205,GO:0003231,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005886,GO:0005911,GO:0007275,GO:0007507,GO:0008016,GO:0008150,GO:0014704,GO:0016020,GO:0019866,GO:0023051,GO:0030054,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044057,GO:0044291,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0048513,GO:0048731,GO:0048856,GO:0050789,GO:0051239,GO:0065007,GO:0071944,GO:0072359,GO:1903522,GO:1903779
Exons8
EggNOG free text desc.regulation of cardiac conduction
EggNOG OGsKOG3689@1,KOG3689@2759,KOG4619@1,KOG4619@2759
Ec32 ortholog descriptionGAF domain
Ec32 orthologEc-26_000330.1
Cds size1164
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig104.941.1prot_Ecto-sp6_S_contig104.941.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig104 181154..186464 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348745.8390718-UTR-Ecto-sp6_S_contig104:180349..1811531682348745.8390718-UTR-Ecto-sp6_S_contig104:180349..181153Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig104 180350..181153 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348745.8487408-CDS-Ecto-sp6_S_contig104:181153..1813271682348745.8487408-CDS-Ecto-sp6_S_contig104:181153..181327Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 181154..181327 -
1682348745.8561049-CDS-Ecto-sp6_S_contig104:181809..1819181682348745.8561049-CDS-Ecto-sp6_S_contig104:181809..181918Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 181810..181918 -
1682348745.86664-CDS-Ecto-sp6_S_contig104:182451..1825491682348745.86664-CDS-Ecto-sp6_S_contig104:182451..182549Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 182452..182549 -
1682348745.8739843-CDS-Ecto-sp6_S_contig104:182959..1831031682348745.8739843-CDS-Ecto-sp6_S_contig104:182959..183103Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 182960..183103 -
1682348745.8820674-CDS-Ecto-sp6_S_contig104:184007..1842291682348745.8820674-CDS-Ecto-sp6_S_contig104:184007..184229Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 184008..184229 -
1682348745.894014-CDS-Ecto-sp6_S_contig104:184942..1850491682348745.894014-CDS-Ecto-sp6_S_contig104:184942..185049Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 184943..185049 -
1682348745.9028745-CDS-Ecto-sp6_S_contig104:185792..1860401682348745.9028745-CDS-Ecto-sp6_S_contig104:185792..186040Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 185793..186040 -
1682348745.9109585-CDS-Ecto-sp6_S_contig104:186402..1864641682348745.9109585-CDS-Ecto-sp6_S_contig104:186402..186464Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig104 186403..186464 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig104.941.1

>prot_Ecto-sp6_S_contig104.941.1 ID=prot_Ecto-sp6_S_contig104.941.1|Name=mRNA_Ecto-sp6_S_contig104.941.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=388bp
MWTGCEVLQAIARNGGLVHLSKIRWQRSSSAAGLAFGAPSCRTVSARRVF
STAKRAKRGRGESGGTTSSRSSAAVEAAAAATPPTQAQLRTLFMHSAVPM
VGFGIMDNFVMISAGDLIDNTLGVKFGLATLTAAACGQVVSDVCGVCFGG
TVEAIATRMGLPAPDLTLRQRGLRACKLAATSGAASGVVVGCILGMGTLL
FMDTTHAEREKKQREMDTLFATILDDGHNIVGAAKCSLFFVDEEEGELWT
KVATDNDGEIKTGKLITIPITTGIVGEVVRTKRLLNVADTSKNTNYYKGV
DLAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNKPEGFDENDEKLVG
MLAAHVGAFMGQVSEGRAGRHEYGEAVPLRRLPTPKN*
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mRNA from alignment at Ecto-sp6_S_contig104:180350..186464-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig104.941.1 ID=mRNA_Ecto-sp6_S_contig104.941.1|Name=mRNA_Ecto-sp6_S_contig104.941.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6115bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:180350..186464- (Ectocarpus species6 EcLAC_371)
ATGTGGACTGGATGCGAGGTCCTGCAAGCAATTGCACGCAATGGTGGTCT AGTGCACCTCAGGTATCGTGCTATCGTGTAGATAGATGGACGCATCGTCA TCACAGCGAAGCTACAGCAGTACTGCTGTCCTCACCTGAGCTGCTCGGTG TATTTCCGCACCGACTCTCTCCCATCCTCCAACAGGACAGAGGCAGCGAT TGTCCCTCACCGACCGGGATGCCGCCACAGCAGCTGTGGGGTTGACTTCG AGTGATTCGCGTGCGTTCTTCTGGCAGTCGCCGGGTTGTAAGCCTGTTGC TCTCTCGCTGCCCGCTGGTGTGTCTAAATTCTGTGGAGTGTGGAGTGATC ACGCCGCATTTTTGCCCGCCGTTTCGCGTTCCTATCCATGCTTGTGGGCC GCCCCTCTCTCGCGGCGCCGGTAGCAAGATACGATGGCAGCGATCGTCCT CAGCTGCAGGCCTTGCTTTTGGAGCGCCTAGCTGCAGAACGGTAAGTGCG CGACGTGTGTTCTCAACAGCGAAACGAGCGAAACGAGGAAGAGGAGAAAG CGGCGGAACCACTTCGAGCAGATCATCGGCAGCAGTTGAAGCCGCGGCAG CGGCGACGCCTCCAACGCAAGCGCAGCTGCGAACGCTTTTCATGCACTCC GCGGTGCCGATGGTTGGATTTGGTGAGTCTTGCGATGCGGGGGGGCAAGG CAGTGTAGAAGTCCTGAGGTTGATTAGTGTAGTCTATAGCCCCTTGCTTG TTCATTCTGCTGCCACAACATAGAACGTGCGGACTCCGTGCATAGCAAGC ACAGCAAGCGCGCTGTTTTGTACTAGGCTACATTTTTTTTTTTTTTTTTG TCTTCACTTCAAATCAGCGCTCACAGCACTATTTTGTACCGTTTACTCCA ACCCGTGGTCACACAGAAGAGCCCCTCTCTACCCTCCCCTCCTGCGGTAA TTTGCCTTCGATTTTTAATGCGAGAAGAGTTCAGCACTCTCTTCCCTCTG TGTAGGTGTACACACTAACTACAATAGCGCTATCCACTAGGCCAGACGCG GAAGCGAGAAAAAAACTCACTTTGCAAGAAAATCTCGCTTACGCCGGGAT TCGAACCCCTGACCTGATCTCTAGAAGGTTCCGAGGGATACAAACTACTG TAGACCACCGGGGCGACCGGCTATCGTACATACTGGCGCCCGCAAATAAA GGCTGGGGTTCTTAGTTGCCTGTTGAGGCTGAAGAAAATGTTTTCATGAG TTTTGCACTTTTGCCTCATGTTCTTAACAGGTACCCATCGTATCAAGTTT TTGTTCGGTATAGGTGCTACAGGTGCTACTACTCCAAGCAGGCTGACCGT TCTTCGGACTTGTTGCCTCGCTGCTGCCACCCTCTCCCCGCTTCCTCGTC GACTACACCCCAAAGGGATAATGGACAATTTTGTGATGATCAGTGCTGGC GACCTCATCGACAATACTCTAGGGGTGAAGTTTGGGCTGGCGACGTTGAC CGCAGCGGCTTGTGGACAAGTGGTAAGTAAGAAGAGTTCTGCTCGAGTTG CAGCAGTCTCCGCGTTTCGTGCGCAGCGTCGCTCTGCAACGCTGCTGTAC GAAAAAGCCCTGGTGCTTACCCCCTCCTGTGTGACCCTGGAGGTTGTCGT TGTAGGAAAAAATACACTGAAAAATGTAGTACTTGCTACATTCACTGACA AGTGTAGTACACGCCCCACAACGAAAATATGGGGACTGTCGCCATAATAA ATACCATGGTAGGACGAAAACACGCGAAGACACACATTGAAAACTCCTCG TTTTACACTACTGCTGTCTTGCTCAGAGAGAACAGGTACGAAAGGGAGAG GGGGGTACGAACATTAGGTTGAGGGAAACGCAGGAGAGAGACAACAACAA CAACAAAGGAGAGGCAACACACGCACCATACAGGTACAGAGTGTGCGCAG GGAAGCAAAGCCGCAGCGTGCGTTATACTCTCTAACCCTTGGCCCCAACC CCCCCCGAGGTTTGATATCAACCAACCGTTTCTCTGTACAACAACAAACC TTCGCAACAAAACGCACAATACTACCTCATTCTCTTCCGGGAATGCACAT GAGTACACCAAACCCGGGCGCTCTTTCGTCTTTTATGGGCAAGATCGTGG GACCACGCCATTCAATACGGCCTTGCGCTCGTTTGTGCCGCCACTTGTTG TTGTCCCTCAACGCGCGCTTTTCGCTCTCTCGCAGGTGAGCGACGTGTGC GGAGTCTGCTTCGGAGGCACAGTGGAGGCCATCGCGACGAGGATGGGGCT GCCTGCCCCTGATCTTACGCTGAGACAACGGGGGCTCCGGGCGTGCAAGC TGGCGGCGACGTCGGGAGCTGCTAGCGGGGTCGTTGTGGGGTGCATCCTG GGAATGGGTACGCTCCTCTTCATGGACACCACCCACGCTGAACGGGAAAA GAAGCAGGTGATGCACTGCTATGGAGGTGTATATATCTCGCCAATACCCC GAAAAATGAGTTAGCAAAAGGGGCCCATTCAGAAACACGAGATCATGCTC ATGCTCGTCAAGGGACGACAAGTAGTTGAGCCCTCAACGAGAAAGGAGAA ATCGAGAGAGAAGGGAAGGAAGCATGGGGAACATGCCACAAGAGTTAGGG AGTGGATTTTCGTTGTTTATGGTAGTCTGCCCCCAATGTGCGGCGTGCGT TGGGTATTTCGTATGGTTGGCCGAAGGGGGCCTAACAAGGGCCGTATTGA GTGCTGCTTTTTTAAGCTGGTGCGGGTGTTGAACAGAGGTATTGCTCTAA TTATCTGCGCCGATGTCACATGGCCTTCCTTCTTTCGGGCGACACGCATG GTCAACGTGAGCGTGTAGCCCAAACCGCATGCATACCATTCCCGTTCCTG CTCGTGCGAGTTCTGCCCAACTGCTTTGATTCAGCCCTTGTGACTGGGGC CTACGGCATTCTTGCGACAACCAATAGCGAGAGAGCTGTCTCTGATGCGG AGTTGAGTGTCTGCCGCAAAAGCGAAGCTGCTGGCTGCGCCGAAGTTTTC TGTATCGTTATTCCGTGACACGCATGCCATCGATGGAGCGCCTTTGATGG ATGATATGTCAACGACCCGGGACAGGCTGGGCGCCGCAAACACAAAACCC GTATACTGAGCGCAAAGTATTTCTGCTGCGCCCCCCCCCCCGCGCGCGCG CTTTCGAAGGGCGGTGGCTTGCTCAGGACAAACTTCTCGGTCGCCCGTTG CCTTCGCCAAAGCTTGTTCTGTGTTTCTCTCGCCACCTTTTTCCGTGCCG CGGAGAGGCTTGAAAGACTCCGGTTACCTTTGCCGTGCCGTGTAACGTCT GTGTCCGGCAGCGAGAGATGGACACGCTGTTCGCCACCATCCTCGATGAC GGGCACAATATCGTCGGGGCGGCCAAGTGTTCCTTGTTTTTTGTCGACGA GGAAGAGGGAGAGCTGTGGACCAAGGTCGCCACCGACAACGACGGAGAGA TCAAGGTCAGGACTTTCTGCCATCTCTGTCGATTGAGCGAGCGAGCGATG AGCGGAGGGTGGCGGTGACGGCGTGTGGGTTCTTCCTCATCCCTCCTGCT CTGTTCGCTAGGATAGACGACGAATATCTACTGCTGTTGAATTTTTGCTT CAGCCGAAGGGACGGGGTAAAGCGATGGTCCGTACAGGACGCGGCCGGGA TAGTATGTGGTAATTTTCGTTGGTACCTCGTCTACCAGACAGCCGCCCCT TGACATTCTACTACAAGAAATAGGATGTACTGCGTGATGCTGACTCGTGG TGTACCGTTGTTCGGTACTGTCGGCACCACGTGACCCTACCTTCCTGCCC CTGCGTTTGTACCCTGGTTCTCGTGTCGGTTCGGAAACTGGTTCTCATGC CTGTTCGAAACCTAGACGGGCAAGCTGATAACGATCCCGATCACGACAGG GATCGTTGGCGAGGTGGTCAGGACGAAGAGGCTGCTCAACGTCGCTGATA CGTCGAAGAACACGTGAGTGTACGAACGAAGCGCCTGCGGGGGCTCCTAG GTTTCCCATTGACCCCGGTTTAGATCGCCCCCAACTGCGTCAATTACGTT ATTGTTTTAGCCTTCTGCGCGAAAAGCGAACCTTGGAGTATGCATGCGAT AGGTCATGCGCAATGTTTTTTTCGTGGGCTCGTCGAAAAGTAGGACAATG TAAACATAATTAAATCAGCACGCGATTGATTCATGGTTCCGATTTTTCCT GGGTGTCAGTCTAAACCGTTCGGTGAGGCATGTCTGAAGCACCCGCCGGG GTCACATAGGAGCACCTCCCCGTATTTTCTCCTCCGGTGCTTGCTTTCAT TTGGCTTCGCAAGAACGGTCGCGAGAGTTTGTAAACGTTCTGTGGAGAGT TGTTCGTCATGCGGGATTCTGTTTTGGCCATGGAGAACCAACGTCATCCT TCAGGCCCAAGTGCCGCACCTACAGCCGTTGGCAATGGACCAACATCTCT TATCTGTGCATACATTTCGACGGACGCTGGTTTCGTAAATGAGCAGAAAC TACTACAAGGGAGTGGACCTCGCGATGAAGACCACAACACGGAACATGTT GGCGGTGCCGGTGATGAGCCGTAGTGACGAGAAGGACGACGGGAAAGTAA TCGCGGTGAGAGAGCACCTCCATCTTTCAGCTATATAGCGTTTCGCCGTT GGCTATCGTGTGTGGTTGCCTGATTTGGTTGTGAACAAATCGTGTACAGG AGAGGCAAGTCACGCTGCCGTCGAGGCACGCTCTCCCGCGGACTGCCCTC GTCAGCGGAACCGTAGTCGCATACAGCAACGACTTCAGAGAAGTAACCTC AACGGCTCCCTTGGAATCTCAACCGGTCTTGTTGCGAGATACTTCGACGG TACTACCGGACATATTGATTGATGATGACACCGTTGTATCATTATTCTGC GTGTGTGTGTGCCTTTTTTGTTGAAGTCTTGGTTCGTCCGTCGTCCACAT TTTGAAGCACCCAACGAGGCTATCGTTGTTTTTTGTATTCACAGTTGTGT TTGATTATTCCCGACCTCGGATGCTTTCGCGTGTTCCCGCGATTCCTGCG CCGCATCTCCATGCGCCACCACAACAAACCCCTGAAGGTTATTGAGATGA TGAACAAACCGGAGGGCTTTGACGAGAACGACGAGAAACTGGTGGGGATG CTTGCCGCCCACGTGGGGGCCTTCATGGGACAGGTGTCGGAGGGAAGGGC GGGCCGACACGAGTACGGCGAAGCGGTGCCCTTGCGGCGCTTGCCCACTC CCAAGAACTGACCAGGTCGCAGGGGCAGGACGTTAACGCCAAACCCTAAG GGTATTTACAGTCGTTCCCGCTTTCGAGCCGCTGGTGGTGGTCCTTTAAT AATCAGTGTCGTTATAATCCCCCCCCCCGCCCCTGTTGTTTTGACGTCCT GCGGGGCTCCATGCTTCTGAACATTGTAGTGGAGTGTATCTGTTATGCGG GGCGTCGTAGTGTTAGTGTCCTTCAAGCAGGAGCGACCGTAACCTGGTGT GCTTAGACTACTTTTGTCGCCGACTGCTGCGCTTGAAGCTATCTATGTAA TCTCGTGTGTCCAGAGTGTCACTTCTTGGGAAATGAATTGGCGGTCTTCT TGCACCTTGATGGTTGGAAAATGCGTGCTAGTTTGAGGCTTGGGTGTTGT TATGTACAAATCTTGTGTGATGACGCTCTTTGAATTCCCAAGGCACATTC AACCGAAGATCCCGTAGATGAGAGTGTTGTCCTCGAGAGCTGGGCCCTGC GAGGTAGATCGCTACATGATTAGCAAACGACGTCGTGAGGGAAGAGGTAT GAGTGTGCTACCTGTGGGTTGATGTCAACTACTAATTTCTTGCCCTTTTT CCCATCTTTTAGGGGTTTAGAGTGAGACAAGTCCGCCCTGCTGCCCACAT TCGTTCGTAGTACACAGCCAATCAGCACTGCCGGCCTTGAGAGAATGGCG AGGCAGACGGTGCATGAAGCCCACGGCCGGTTGGTAGGGTAAAATGGGCA CGGCCGCCAATCATTGCCGTGCTCGCACCACGTTTTCTTGTTGTGGTCTT CGATCATCATGTGGC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:180350..186464-

>mRNA_Ecto-sp6_S_contig104.941.1 ID=mRNA_Ecto-sp6_S_contig104.941.1|Name=mRNA_Ecto-sp6_S_contig104.941.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1164bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:180350..186464- (Ectocarpus species6 EcLAC_371)
ATGTGGACTGGATGCGAGGTCCTGCAAGCAATTGCACGCAATGGTGGTCT
AGTGCACCTCAGCAAGATACGATGGCAGCGATCGTCCTCAGCTGCAGGCC
TTGCTTTTGGAGCGCCTAGCTGCAGAACGGTAAGTGCGCGACGTGTGTTC
TCAACAGCGAAACGAGCGAAACGAGGAAGAGGAGAAAGCGGCGGAACCAC
TTCGAGCAGATCATCGGCAGCAGTTGAAGCCGCGGCAGCGGCGACGCCTC
CAACGCAAGCGCAGCTGCGAACGCTTTTCATGCACTCCGCGGTGCCGATG
GTTGGATTTGGGATAATGGACAATTTTGTGATGATCAGTGCTGGCGACCT
CATCGACAATACTCTAGGGGTGAAGTTTGGGCTGGCGACGTTGACCGCAG
CGGCTTGTGGACAAGTGGTGAGCGACGTGTGCGGAGTCTGCTTCGGAGGC
ACAGTGGAGGCCATCGCGACGAGGATGGGGCTGCCTGCCCCTGATCTTAC
GCTGAGACAACGGGGGCTCCGGGCGTGCAAGCTGGCGGCGACGTCGGGAG
CTGCTAGCGGGGTCGTTGTGGGGTGCATCCTGGGAATGGGTACGCTCCTC
TTCATGGACACCACCCACGCTGAACGGGAAAAGAAGCAGCGAGAGATGGA
CACGCTGTTCGCCACCATCCTCGATGACGGGCACAATATCGTCGGGGCGG
CCAAGTGTTCCTTGTTTTTTGTCGACGAGGAAGAGGGAGAGCTGTGGACC
AAGGTCGCCACCGACAACGACGGAGAGATCAAGACGGGCAAGCTGATAAC
GATCCCGATCACGACAGGGATCGTTGGCGAGGTGGTCAGGACGAAGAGGC
TGCTCAACGTCGCTGATACGTCGAAGAACACAAACTACTACAAGGGAGTG
GACCTCGCGATGAAGACCACAACACGGAACATGTTGGCGGTGCCGGTGAT
GAGCCGTAGTGACGAGAAGGACGACGGGAAAGTAATCGCGGTTATTGAGA
TGATGAACAAACCGGAGGGCTTTGACGAGAACGACGAGAAACTGGTGGGG
ATGCTTGCCGCCCACGTGGGGGCCTTCATGGGACAGGTGTCGGAGGGAAG
GGCGGGCCGACACGAGTACGGCGAAGCGGTGCCCTTGCGGCGCTTGCCCA
CTCCCAAGAACTGA
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