Homology
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
D7G6R8_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R8_ECTSI)
HSP 1 Score: 792 bits (2045), Expect = 2.640e-284
Identity = 413/415 (99.52%), Postives = 414/415 (99.76%), Query Frame = 1
Query: 139 MASAEVMAMPVDTPTGDAAGKERQQQAAAEDAGAAQDVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYSM 1383
MASAEVMAMPVDTPTGDAAGKERQ QAAA+DAGAAQDVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYSM
Sbjct: 1 MASAEVMAMPVDTPTGDAAGKERQHQAAADDAGAAQDVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYSM 415
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
A0A835ZCH4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH4_9STRA)
HSP 1 Score: 683 bits (1762), Expect = 1.350e-241
Identity = 352/379 (92.88%), Postives = 368/379 (97.10%), Query Frame = 1
Query: 244 QDVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYS 1380
QD++VK KSLQKH+EFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNE+IDANYGIVGSTAGSNYFVRILSTLDRE LKPNTSVALHRHSHSVVEILPPESDSTIQLMQE+PDV Y DIGGMDMQKQEVKEAVELPLTHF+LY+QIGIDPPRGVL+YGPPGTGKTMMAKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSV+FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+VFTAC +KMNLSEEVDLEDYVNRPEK+SAADISAI QEAGLQAVR+NRYVVLGKDLDKAYK +VNK D E AFYS
Sbjct: 18 QDLFVKYKSLQKHLEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEMIDANYGIVGSTAGSNYFVRILSTLDREKLKPNTSVALHRHSHSVVEILPPESDSTIQLMQEKPDVAYTDIGGMDMQKQEVKEAVELPLTHFELYRQIGIDPPRGVLLYGPPGTGKTMMAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRLVFTACVSKMNLSEEVDLEDYVNRPEKISAADISAICQEAGLQAVRQNRYVVLGKDLDKAYKNNVNKADKELAFYS 396
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
K8Z3K8_NANGC (26S proteasome regulatory subunit T3 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3K8_NANGC)
HSP 1 Score: 667 bits (1720), Expect = 5.410e-235
Identity = 338/380 (88.95%), Postives = 364/380 (95.79%), Query Frame = 1
Query: 244 QDVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYSM 1383
+D+Y +LK LQ+ +EF+DIQEEYIKDEMKNLKRELIRAKEE+KRIQSVPLVIGQFNE+IDA+YGIVGSTAGS Y+VRILSTLDRE LKPN SVALHRHSHSVV+ILPPESDSTIQLMQE+PDV+Y+DIGGMD+QKQEVKEAVELPLTHF+LYKQIGIDPPRGVLMYGPPGTGKTMMAKAVA AT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPS+VFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKRMVF ACTAKMNL ++VDLEDYVNRPEK+SAAD++AIAQEAGLQAVRKNRYV+L +D D+AYKKHV K D EH FYSM
Sbjct: 32 EDLYTRLKQLQRQLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDSTIQLMQEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDEAYKKHVTKADKEHWFYSM 411
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
A0A6V1PIA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PIA9_HETAK)
HSP 1 Score: 663 bits (1710), Expect = 1.600e-233
Identity = 332/384 (86.46%), Postives = 366/384 (95.31%), Query Frame = 1
Query: 232 AGAAQDVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYSM 1383
A ++ D+YVKLKS QKH+EFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNE++DANYGIVGSTAGS+Y VRILSTLDRE LKPNTSVALHRHSH+VVE+LPPESDSTIQLM E+PDVTY +GG+DMQKQE++EAVELPLTHF LYKQIGIDPPRGVL+YGPPGTGKTM+AKAVAN+T+A+FIS+VGSEFVQKYLGEGPRMVRDVFRLAREN+P++VFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIM TNR DTLDPALLRPGRLDRKIEFP PDRRQKR+VF A TAKMNLSE++DLEDYVNRPEK+S+AD++AI QEAGLQAVR+NRYV+LGKD D+AYKKHVNK D EHAFYSM
Sbjct: 25 AASSTDLYVKLKSFQKHIEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEMLDANYGIVGSTAGSSYMVRILSTLDREALKPNTSVALHRHSHAVVEVLPPESDSTIQLMAEKPDVTYQQVGGLDMQKQELREAVELPLTHFQLYKQIGIDPPRGVLLYGPPGTGKTMIAKAVANSTTAAFISMVGSEFVQKYLGEGPRMVRDVFRLARENAPAIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMCTNRPDTLDPALLRPGRLDRKIEFPEPDRRQKRLVFQAATAKMNLSEDLDLEDYVNRPEKISSADVAAICQEAGLQAVRQNRYVILGKDFDEAYKKHVNKADKEHAFYSM 408
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
A0A7S2XX15_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX15_9STRA)
HSP 1 Score: 655 bits (1691), Expect = 1.050e-230
Identity = 333/379 (87.86%), Postives = 361/379 (95.25%), Query Frame = 1
Query: 247 DVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYSM 1383
D YV+LKSL+KH++FLD+QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNE+ID NYGI GSTAGSNY+VRILSTLDRE LKPNTSVALHRHSH+VVEILPPESDSTIQL+QE+PDV+Y DIGGMDMQKQE++EAVELPLTHF+LYKQIGIDPPRGVL+YGPPGTGKTM+AKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSPS+VFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+T VKVIMATNR DTLDPALLRPGRLDRKIEFP PDRRQKR+VF ACT+KMNLSE++DLEDYVNR EK+SAADISAI QEAGL AVR+NRYVVL KD DKAYK + NK D EHAFYS+
Sbjct: 26 DEYVRLKSLKKHVDFLDLQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEMIDTNYGIAGSTAGSNYYVRILSTLDREKLKPNTSVALHRHSHAVVEILPPESDSTIQLLQEKPDVSYSDIGGMDMQKQELREAVELPLTHFELYKQIGIDPPRGVLLYGPPGTGKTMIAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTTVKVIMATNRPDTLDPALLRPGRLDRKIEFPNPDRRQKRLVFQACTSKMNLSEDLDLEDYVNRAEKISAADISAICQEAGLCAVRENRYVVLPKDFDKAYKNNTNKQDKEHAFYSI 404
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
A0A7S2RC03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RC03_9STRA)
HSP 1 Score: 651 bits (1679), Expect = 1.510e-228
Identity = 335/379 (88.39%), Postives = 357/379 (94.20%), Query Frame = 1
Query: 244 QDVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYS 1380
+D+YVK KSLQK +EF IQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQF+E+ID NYGIV STAGSNY+VRILSTLDRE LKPN SVALHRHSHSVV+ILPPESDSTIQLM E+PDV Y DIGG+D+QKQEV+EAVELPLT F+LYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPS++FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKRMV ACT+KMNLSEE+DLEDYVNRPEK+SAAD+SAI QEAGLQAVR+NRYVVL KD D AYKKHVNK D + AFYS
Sbjct: 47 EDLYVKYKSLQKQLEFYGIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFSEMIDENYGIVMSTAGSNYYVRILSTLDREQLKPNASVALHRHSHSVVDILPPESDSTIQLMAEKPDVGYQDIGGLDIQKQEVREAVELPLTQFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVLQACTSKMNLSEEMDLEDYVNRPEKISAADLSAICQEAGLQAVRENRYVVLTKDFDNAYKKHVNKADKDFAFYS 425
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
H3HD78_PHYRM (AAA domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=H3HD78_PHYRM)
HSP 1 Score: 639 bits (1648), Expect = 3.650e-224
Identity = 322/382 (84.29%), Postives = 358/382 (93.72%), Query Frame = 1
Query: 238 AAQDVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQ--ERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFY 1377
A D+Y K KSLQ+H+EFLDIQE YIKDEMKNLKRELIRAKEE+KRIQSVPLVIGQF E++DANYGIVGSTAGSNY+VRILSTLDRE LKPN+SVALHRHSH+VV++LPPESDS+IQ+MQ ERPDV+Y DIGGMD+QKQEV+EAVELPLTHFDLYKQIG+DPPRGVLMYGPPGTGKTM+AKAVANAT+A+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP++VFIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKR+++ ACTA MNL +EVDLEDYVNRPEK+S+ADI++I QEAGLQAVRKNRYVVL KD DK YK + + DT FY
Sbjct: 23 AKTDLYAKYKSLQRHLEFLDIQEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDANYGIVGSTAGSNYYVRILSTLDREKLKPNSSVALHRHSHAVVDVLPPESDSSIQMMQMSERPDVSYSDIGGMDIQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTANMNLGDEVDLEDYVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFDKGYKNAIKRADTTFEFY 404
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
M4BL12_HYAAE (AAA domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BL12_HYAAE)
HSP 1 Score: 636 bits (1640), Expect = 5.970e-223
Identity = 319/379 (84.17%), Postives = 358/379 (94.46%), Query Frame = 1
Query: 247 DVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQ--ERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFY 1377
D+Y K KSL++H+EFLDIQE YIKDEMKNLKRELIRAKEE+KRIQSVPLVIGQF E++DANYGIVGSTAGSNY+VRILSTLDRE LKPN+SVALHRHSH+VV++LPPESD++IQ+MQ ERPDV+Y DIGGMD+QKQEV+EAVELPLTHFDLYKQIG+DPPRGVLMYGPPGTGKTM+AKAVA+AT+A+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP++VFIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKR+++ ACTAKMNL +EVDLEDYVNRPEK+S+ADI++I QEAGLQAVRKNRYVVL KD DK YK + + DT FY
Sbjct: 26 DLYAKFKSLERHLEFLDIQEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDANYGIVGSTAGSNYYVRILSTLDRERLKPNSSVALHRHSHAVVDVLPPESDTSIQMMQMSERPDVSYSDIGGMDIQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVAHATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTAKMNLGDEVDLEDYVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFDKGYKNAIKQADTTFEFY 404
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
A0A8K1FEB1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEB1_PYTOL)
HSP 1 Score: 635 bits (1639), Expect = 8.460e-223
Identity = 319/379 (84.17%), Postives = 358/379 (94.46%), Query Frame = 1
Query: 247 DVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQ--ERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFY 1377
D+Y K KSL++H+EFLDIQE YIKDEMKNLKRELIRAKEE+KRIQSVPLVIGQF E++D+NYGIVGSTAGSNY+VRILSTLDRE LKPN+SVALHRHSH+VV++LPPESDS+IQ+MQ E+PDV+Y DIGGMD+QKQEV+EAVELPLTHFDLYKQIG+DPPRGVLMYGPPGTGKTM+AKAVANAT+ASFI VVGSEFVQKYLGEGPRMVRDVFRLA+ENSPS+VFIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKR+++ ACTAKMNLS+EVDLED+VNRPEK+S+ADI++I QEAGLQAVRKNRYVVL KD +K YK + + DT FY
Sbjct: 26 DLYSKFKSLERHLEFLDIQEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDSNYGIVGSTAGSNYYVRILSTLDRERLKPNSSVALHRHSHAVVDVLPPESDSSIQMMQMSEKPDVSYQDIGGMDVQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTAKMNLSDEVDLEDFVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFEKGYKNAIKRADTTFEFY 404
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Match:
F0YA82_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA82_AURAN)
HSP 1 Score: 632 bits (1629), Expect = 2.310e-221
Identity = 318/378 (84.13%), Postives = 354/378 (93.65%), Query Frame = 1
Query: 247 DVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYS 1380
D+Y K K++++ +FLD+QE+YIKDE+KNLKRELIRAKEEIKRIQSVPLVIGQFNE++DA YGI STAGS Y+VR+LSTLDRE LKPN+SVALHRHSHSVV++LPPESDSTIQLM E+P VTY DIGG+D+QKQE++EAVELPLT F+LYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAN+T+ASFISVVGSEFVQKYLGEGPRMVRDVFRLAREN+P+++FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+VF ACTA MNLS+ VDLEDYV+RPE+VSAAD SAIA EAGL AVR+NRYVV+ KDLD AYKKHVNK DT+ AFY+
Sbjct: 22 DLYAKYKTMEQEKDFLDVQEQYIKDEIKNLKRELIRAKEEIKRIQSVPLVIGQFNEMVDATYGIASSTAGSVYYVRVLSTLDREKLKPNSSVALHRHSHSVVDVLPPESDSTIQLMMEKPKVTYKDIGGLDVQKQEMREAVELPLTQFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANSTTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPAPDRRQKRLVFQACTANMNLSDTVDLEDYVSRPERVSAADCSAIANEAGLHAVRENRYVVMPKDLDAAYKKHVNKADTDFAFYT 399
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.938.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.64e-284 / Id = 99.52 Expect = 1.35e-241 / Id = 92.88 Expect = 5.41e-235 / Id = 88.95 Expect = 1.60e-233 / Id = 86.46 Expect = 1.05e-230 / Id = 87.86 Expect = 1.51e-228 / Id = 88.39 Expect = 3.65e-224 / Id = 84.29 Expect = 5.97e-223 / Id = 84.17 Expect = 8.46e-223 / Id = 84.17 Expect = 2.31e-221 / Id = 84.13 Sequence D7G6R8_ECTSI A0A835ZCH4_9STRA K8Z3K8_NANGC A0A6V1PIA9_HETAK A0A7S2XX15_9STRA A0A7S2RC03_9STRA H3HD78_PHYRM M4BL12_HYAAE A0A8K1FEB1_PYTOL F0YA82_AURAN Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 801.2 Seed ortholog evalue 2.3e-229 Seed eggNOG ortholog 2880.D7G6R8 Preferred name PSMC4 Model size 2065 KEGG ko ko:K03063 KEGG Pathway ko03050,ko05169,map03050,map05169 KEGG Module M00341 Hectar predicted targeting category other localisation GOs GO:0000166,GO:0000228,GO:0000502,GO:0000731,GO:0000785,GO:0000790,GO:0001673,GO:0001701,GO:0001824,GO:0002020,GO:0002082,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005829,GO:0005838,GO:0005911,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006914,GO:0006919,GO:0006950,GO:0006970,GO:0006972,GO:0006974,GO:0006996,GO:0007034,GO:0007041,GO:0007088,GO:0007275,GO:0007346,GO:0008047,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0008540,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009506,GO:0009628,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010562,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010918,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016197,GO:0016234,GO:0016236,GO:0016462,GO:0016504,GO:0016567,GO:0016579,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017025,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019985,GO:0022411,GO:0022607,GO:0022624,GO:0023051,GO:0023056,GO:0030054,GO:0030071,GO:0030111,GO:0030162,GO:0030163,GO:0030177,GO:0030234,GO:0030312,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030970,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031593,GO:0031595,GO:0031597,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0034098,GO:0034214,GO:0034399,GO:0034404,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034976,GO:0035639,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036402,GO:0036435,GO:0036503,GO:0036513,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042623,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0043009,GO:0043065,GO:0043067,GO:0043068,GO:0043073,GO:0043085,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043248,GO:0043254,GO:0043280,GO:0043281,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043531,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045184,GO:0045202,GO:0045732,GO:0045787,GO:0045838,GO:0045840,GO:0045842,GO:0045862,GO:0045893,GO:0045898,GO:0045899,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0045981,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051788,GO:0051881,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0055044,GO:0055086,GO:0060255,GO:0060260,GO:0060261,GO:0060828,GO:0061134,GO:0061136,GO:0061641,GO:0061857,GO:0061919,GO:0062012,GO:0062013,GO:0062033,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070646,GO:0070647,GO:0070682,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0071218,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071944,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0080090,GO:0090068,GO:0090085,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0098772,GO:0098796,GO:0098827,GO:0140030,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902680,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903862,GO:1904288,GO:1904949,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990381,GO:1990730,GO:2000058,GO:2000060,GO:2000112,GO:2000116,GO:2000142,GO:2000144,GO:2000152,GO:2000158,GO:2001056,GO:2001141,GO:2001169,GO:2001171,GO:2001252 Exons 7 EggNOG free text desc. proteasome-activating ATPase activity EggNOG OGs COG1222@1,KOG0727@2759 Ec32 ortholog description P-loop containing nucleoside triphosphate hydrolase Ec32 ortholog Ec-26_000370.1 Cds size 1248 COG Functional cat. O Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko03051
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348745.4568794-UTR-Ecto-sp6_S_contig104:148160..148298 1682348745.4568794-UTR-Ecto-sp6_S_contig104:148160..148298 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig104 148161..148298 + 1682348745.5261638-UTR-Ecto-sp6_S_contig104:158085..158764 1682348745.5261638-UTR-Ecto-sp6_S_contig104:158085..158764 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig104 158086..158764 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348745.4661787-CDS-Ecto-sp6_S_contig104:148298..148463 1682348745.4661787-CDS-Ecto-sp6_S_contig104:148298..148463 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 148299..148463 + 1682348745.4735055-CDS-Ecto-sp6_S_contig104:150372..150511 1682348745.4735055-CDS-Ecto-sp6_S_contig104:150372..150511 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 150373..150511 + 1682348745.4809692-CDS-Ecto-sp6_S_contig104:151618..151830 1682348745.4809692-CDS-Ecto-sp6_S_contig104:151618..151830 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 151619..151830 + 1682348745.4887536-CDS-Ecto-sp6_S_contig104:152475..152637 1682348745.4887536-CDS-Ecto-sp6_S_contig104:152475..152637 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 152476..152637 + 1682348745.4960306-CDS-Ecto-sp6_S_contig104:153245..153473 1682348745.4960306-CDS-Ecto-sp6_S_contig104:153245..153473 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 153246..153473 + 1682348745.5074158-CDS-Ecto-sp6_S_contig104:153732..153882 1682348745.5074158-CDS-Ecto-sp6_S_contig104:153732..153882 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 153733..153882 + 1682348745.5163047-CDS-Ecto-sp6_S_contig104:157893..158085 1682348745.5163047-CDS-Ecto-sp6_S_contig104:157893..158085 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig104 157894..158085 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.938.1
>prot_Ecto-sp6_S_contig104.938.1 ID=prot_Ecto-sp6_S_contig104.938.1|Name=mRNA_Ecto-sp6_S_contig104.938.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=416bp
MASAEVMAMPVDTPTGDAAGKERQQQAAAEDAGAAQDVYVKLKSLQKHME back to top mRNA from alignment at Ecto-sp6_S_contig104:148161..158764+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig104.938.1 ID=mRNA_Ecto-sp6_S_contig104.938.1|Name=mRNA_Ecto-sp6_S_contig104.938.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10604bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:148161..158764+ (Ectocarpus species6 EcLAC_371)AAAGGCGAGGAGAGCATCACCCTGCCTGGCGGAGTAAGCAAGCTTGGCAC
GGCGGTAGCGTTCGGCAGCATTTGGGTGGGTTGGATAGATCAAGGGGGCT
CAAGGCAAGAAGTGGACCTAAGGAGGCGCTGAGGGACT ATGGCTTCGGCG
GAAGTGATGGCAATGCCTGTAGACACGCCAACAGGAGATGCTGCAGGCAA
AGAGCGGCAGCAGCAGGCAGCAGCAGAGGACGCCGGCGCAGCTCAGGATG
TCTACGTCAAGCTCAAGTCTCTGCAGAAGCACATGGAGTTCCTTGACATC
CAG GTAAGGCTCTGGCGGCAAGTGCGACGTATTTTTGTATCAGGTGCTTC
GCTGTTACGTTGTGGCATACCGCGATGATGGCGGTGGTGCGGAGATCTCT
CGACTTCGGTGTGCCCCTGCTCTCTACCTCAAAAACAAGATAAAAAAATG
TGTACCATAACAAATCCGTCACCCATGATGTCAATGACACTTTCGTACAG
TACTGCTACAGTACTCTGTGAGGTACACAGCCCAGCGGGTAGGTCTGAGT
AAGGTTGATCCCACAGCTGGGCGAAGAGTTAACCACCCAAACAAAAGCGA
GAAACGCGCGTAGATATAGATGCCCTGCTGCGGAAATAAATAAACAAATG
GCCCGCGAAAATTGTTTGAAGACGAGTAACGCAATACAGAAATCGGCAAG
GACCTAAATGATGGGTAAACCTCGTCAACCTACATGTACGATCGGAGTCG
CGTGAGATACCGCACCCCCTCGACAAGTTTGCAAAGCTCAACTACTCTGC
AGCAAACACCGCGACGGTATGGTACCGACAAATGGCGGCGTTGGAACAGC
AGTGTCGTCGAGAGCATCCCGACAACAGCAGTGCTGTTGTCGTTTGATTT
ATTGTCATCCTCTTCGTCGCGAATCGAGCTACATGCTTGAAAAAACGGTC
TAGGGGGTGTGGTATCTTACGCGACCTACCGTACATTGCACGTATCAGCA
TGTTGTGGGTTCGGGTCTCTCTCGGAAGGCGTCTGTTGCGTTATACACCT
TCTGCTGCGTCACCCTGGCTGGTGCGTCAAACCCATCCATCTATGTACAT
ACAGTGAATTGTGTTGACGGCTGGGGCCCGGTATCTATGCGGCGAAAAGA
AACATGGACATTACTCCCGTGTCCTCGGCGAATGTACGTACCAAGGGGCA
GACCTAAACATTTAGACAGCGATCGATCAAACACGCGCCCGCCATTGCAG
AAAAAAATTACGCCTCCTGAACGGAGTTTTTTCATTTTGTGGCATGGAGA
GAAAATCTACGAGTCTAACCTTGATCTGATCAAGGCGGGTGTCAATCATC
GGCTTTCGCCTCTGTACCCGATAGGGCTATCTCTTTCTCGACCTGATCAT
GTTGGGGCTGGTTATTGCGGTGTGGTCATGTGTACAGCAATAGCAATGAG
AGGTCGGAGATGCTCTGTAACGGCGTGTGGGCCTTCCTCCTCGGCCGCAG
CAGCGTGCCTCCGAAAACCTCCTACAAACCCCCACCTGAAGGGTTTTTCT
ACTCAATGTCCGGTCAGAGCAGCAGCAATAGCTTCCTACAGACCACCTGC
CTAGACAGAGCCAACTCCTCTCTGTCTGCTGCAGCTTCCCCATGTCTGCT
TTCTGTGCAAGACGTCTCCCTCAATTCTGCTGCTGTTTCGCTCTTTTTGT
TGGTGTAGTTCTCCCCCGCCCCCGCCCCCCCACGAGGGGGGAGAGATTGA
CTGCATGCATGCACCCTTGGGAGCACAGCTGTTTCCGGCCTGCAATCCAT
GTACACGGCACGGGGGAGCTTCCGCATTTTTCGGGAGAAAACCCATTTAT
GGCTATCGTTGGCATAGGCTTCGCTTGCGTTACCATTTCGGCACAGCAGC
GGTGATCTCAACAACACAAGCGGAAGCTTCGGTGCCTTCGGGACAAGGGG
GAGGTTCGACGCTGGGTACCCTTATGAGCCGGACGCAGGAGAGGCCGTCC
CTCGTCTACTACGTATTTATCTGTCAGGGATCGATTGTTGAGGGTTGTTG
CCGACGCCCGCCTTTCCTTCGGTCGGCTGCTGAGTCACCCCACGTGTGCA
TGGATCCGACCGCACCTGCTGAGAGACCGGCCTTGTGCTCGGTTTGATCT
AACGGTATCACACGCCGGAACGAATAACCGTACCACATGTTTTCTGGGTG
GGTGTTGCGCAGGAGGAGTACATCAAGGACGAAATGAAGAACCTAAAGCG
GGAGCTCATCCGGGCGAAGGAGGAGATCAAGCGGATCCAGTCGGTGCCGC
TGGTGATCGGGCAGTTCAACGAGATCATCGACGCGAACTACGGCATCGTC
G GTGAGTCTTGATTTACTCAAGGCAAACAAGCATTTAAATAGTCTGTTAC
GGCCCTTATCTTGTGCCATGCCAAGAGAGCTGTGTCATCCTGTGCACGCA
ACTGCACTGCACCGTGTACAAGTATCTCTTTCCGCATGCCGATTTTTTGG
GTGTAAAGTGAGACAAAATCTCCCAGCTTTTGTGACTGCACCGCGAGTCA
TTTCTACGGCAAACCTCTCCAGAAGGCTGCGAGATAATCAGCCGAGACAC
ACGGCCACCGTTGTAGACTAACCTCTAGGTGGAGGGTGCGTGTGTGTCTG
CTGCAACATTGCGTCGGCGAAGACCTGAAACTAACTCCGCTTGAAGGATG
CACCACGGAAGTAGACGCGTCCCATGCTGTATCTACGACAGCCATTTCGA
TACTGGCCAGGCTGACGATTGCAGCGATACTTTGGTTGGTTACGCGCTTG
GGAAAGTTGAAGTTGGGTAAATTAGATTCCCTTGACCGCGTAGCAGAAGA
CACAGACGTTTTGCGCGTTGCGTGAGGACTTTGCCCCGTTCTGTTTGTTA
CACCGCCCGGGCCACGTTCTGTTATGCGGACCATCGACGGTATCGAATCA
TTTTCGTGACACATTCTCGGGTGTTTTTCCCTCCAGATTCCCTTGGTGCC
CGGCCACCAAGAACATCTACCTCGCTCAATGAAGGGCGGATCTGAGGTTT
ACCACGGTTTACCATGTATAGCACTCGAGCATTTCGTATATGCCGGAAAA
GGGGGAATAGGGACGGGGCAGTCATCGTCGTAAATCCTCTGCCGCTGTTG
GTCCTTGTCACACCCGCTTGGTTCGAATCGCGAAGTGTGCGTTCGCGTTC
CCCGCAGCTAGCGTAGCCAACAGACCACCAAACACGAAAAGACTGCCCAC
GGGGGAGATATCACTGCGTGCTGCTCGGGAAATCGTGGGAAAACAGAACT
TTCGCTGACTGTATGGATTCATCGCTAATCTATCTTAGGATCTTTTCTTC
GATAGAGGTGGGGTGTACTGAAGAAGTAAAAAAGATTGCTGTCCGTTTAA
TTACATCCGCACACCCACCCACCCACCCGCGTGCATCGTGTATGTATGTA
TCTTGTAGGGTCGACGGCGGGATCGAACTACTTCGTTCGCATCTTGAGTA
CCCTGGACCGAGAGGTGCTAAAGCCGAACACGTCGGTAGCGCTGCACCGC
CACAGCCACAGCGTGGTGGAGATACTGCCTCCGGAGAGCGACTCCACGAT
CCAACTCATGCAGGAGAGGCCGGACGTGACGTACCACGACATCGGGGGCA
TGGACATGCAGAAGCAGGAG GTGGGTGGGGGGACCTTTCTCTGTCTGTCT
CTCTCTCTCTCTCTCTGTCCGTTGCGTTCGTGCCACAAGTGTTACCTGTC
GTTGTTTAATCTGAAGGAGGCGTGGGGGGTGGGTCGGTCTTTGGAGGGTT
AATTATGTCTCTGGTTGTTGCCGCCTTTTGTTTCGTGCTCCAACCGCTCG
CTGCCTGTGGTTCTTCAATCTGTGGCCTTCGACGCTATTTTTCAAGCTTC
GTTGTTGTTGAGCCTACACATGCCTCCGTGTTCCGCGCTGCCGGGATTGT
GGAATTGCACTTTCCCCACAGGAGAACAGTTTGAGTTTCAGCGGTAGAGG
TTCCTGTTTTAAGGCCGGTTGCCCTGCTTAAGGCCGGTGAAATCTCGTGG
CATGCACAGATGGAATGTTTTAAGTTTTCTCGTACTCTAAATAACGCCGG
GTGCCCGAAACAAGGCCGGCGAAATAATCCGTTGGACCATCGCGGCCTTG
GAACAGGAAACTGTAGTTGTACTAGAAGCAGGGTAACCACGGTGACACTA
TTAATACTCGTACAAAACTACGAGGATACGAGGAGCGGCAGCAGCGTGCT
TTTCCAACTCTTCTGAAGCAGTCCCTCTCCTCCCTCCCTCCATCCCTCTC
GACCCGTCAACTCAGGTGAAGGAAGCGGTTGAGCTCCCGCTGACGCACTT
CGACCTGTACAAGCAGATCGGCATCGACCCCCCGAGAGGTGTGCTCATGT
ACGGCCCTCCGGGAACGGGGAAGACGATGATGGCCAAGGCCGTGGCTAAC
GCCACGAGCGCTTCGTTCATCAGCGTG GTAAGTTCTGGCGGGGGGGGCAC
CAGTCGGACACCAAGCATGCTCGTCACTAGAGCAGTTACAGCAGTAGCGG
CTATTGTACCAGTACGGTTTAAGAGATTGTTTTTGAGGGAAAGCATGTAC
TCTACTCACGGATTTGGGTGTGTATTTCTTGTACTTTTGGCTTGCCCCGA
TCCTCTTGTTAATCGATATGTATAACAGCAGTAGTAGCAGCTGCTGTTCT
TTAAAGTAACGAAAGTCTGCCTTGTTCTTTGAAATCCAGTGTCCAACAGT
ACCGGTTTGTGCCGCTCGCTCGTGTACATTCGCCGTTAGGTCTACCATAG
CGTCCGTTGGTCGCGACTCTTCCCCCGCGTAATCTATGCTTGTCCTAGTA
TAGTCGGGATTGATAGGTACGGTGTGGGCAGTGTCCGGTGAACATCAGGA
GAAGATACAAACCACGAGACTCAAGGAACTAGAGTAACCCTGAAGCTACC
CGCATGAATGCCCATCGTGGCGAAACCTGTGTGTAGCAACCGCAGAGGTG
CATGCACTCGCCCACGCTGCCGTCACCCCGTGTCAAATCGTCCGAACGGC
GTAAATGACAAATTTCCACTCGTCCGTGCCAACAGGTGGGGTCAGAGTTC
GTGCAGAAGTACCTTGGGGAGGGGCCCCGCATGGTGAGGGACGTCTTCCG
CCTGGCGAGGGAGAACTCCCCTAGCGTGGTCTTCATCGACGAGATCGATG
CCATCGCCACCAAGCGCTTCGACGCGCAGACAGGAGCTGACCGCGAGGTG
CAGCGAATCCTGCTCGAGCTGCTCAACCAGATGGACGGTTTCGACCAGAG
CACCAACGTTAAG GTGAATAATGACGGTTTCAGCAGCCAGCGTGTGATAA
TGATATTTTGCAGCTGCCGTCGAGATGGTGTTTATGAGGCGAGGCAAATT
CGATTTGGCTCGTCCACGCACCTCCCAAGGCTCACCAATTTTTTTTCGCG
GCGGTTTTTAAGTGTCTCGGGTGACTGATGACCATGGCGGCGGTTTAATC
ATCCACCGGCTTTTTGTCCTGCACACGCGATGCTGTCACCTCCTAAACCC
ACTACTTGCTTGTCTGTATCAGGTGATCATGGCGACGAACAGGGCGGATA
CGCTGGACCCGGCTCTGCTGCGGCCGGGGAGATTGGACCGCAAGATCGAG
TTCCCGGTGCCGGATCGACGGCAGAAGCGCATGGTGTTCACGGCTTGCAC
CGCCAAGATGAACCTTAGCGAG GTGTGTAACCGGCTGACATCGGTTTTCT
TGCCCCCCCGCCACCAACAAAAAAAACGCACCGCAATCTTGCGTGCCTGA
GCAACACAATTAACATGGTTCCGGTGTTACTGCTGTGCTTTTGACTGCGG
TATTTGTCTTGGGGGGTTCCACTGCCTTGTGCTGTCTACATGGCACGGTG
CCGGTGCTCGCGCGTGTAACAATGAAAAAGACACGATATCCGCTTAGCCA
AGCACACAGAAACAACGGCAGTCGCACCGCACCCTGCCACCAACCGATGC
ACCACAGGCCTTGCGATAACTACTCGCATACGGAAAGCATGCAACACATG
AGCCGAAAACAAAATTCTACATAAGTGGAAGGCACCCACCCACCCGTGTC
TCGGCGCGAAGTCCACGCCCCTCGGTCTGCTCTCGACTCACATAGCGCCC
ATAGTAAAGTGGCCGACACACGGCTGTTGAGCACTGCCATGATGATGATG
GCATCTGCTACTGCTGCTCTTGCTGCTGCTGTGACCACTCAGGGCGTTAG
TGCCTTGTGTGCGTGCTTTCTTTGCTCTCGCCACGCATACATATCTATCT
GCTCACCGCGCATTCCCTCTCTCGTCTCCCCAGCAACCCAAAAGCAATCA
AAGTTTAGTTGCGAGGGAGGTGTAGAGATTGACGAAATCGCAGACAGCCT
CCCATACCTGGAGCACCTGTGTGCGTCCCGTTCTTCCTGGCGCTTGTCTA
CACGCCTCTCGGTGTACATTTTGGCCACGTACAGTATCAACCAGGGTCAC
ACGGGAGCTTTTTTATTTTTCTTTAAATATTTTACTACCCCACTTTTTCC
TCCTGCGGTGTGTGATGTGAAAACCTTCCATCAGCGTGATGTGGAAACCT
TCCACCGTGTGTATGATCGGCTCCTGTGGTGGTGTGCAAAGATGAGTTGA
TGCCAGGGGGGTGCGCCCGTCGTGTTAGTTGTTGGTTGCTGTGGCGTGGC
GTGGCAGCACTACAGCAGTACCTTCTTGTCTTGTTTTTTTTGCCCGTTGG
CTCTGTTCCAAGCGTGTGCTGTGAGTGTGCAAGCAAAGCGAAGCAGAGCG
GCGGTGTGGCTGTAGGCTGCCGCAATATCACATCCACACAACGCCCTTTC
TAGTAGATACAAGTGTAATGCCGAAACCGCACAAGGGggggggggctaGG
GGCTAGGGTGTCGTGGAGCTTGTACTGCAATTGTACAGACGGCGGCTGAG
CTTACGTTCATTCTTCGCGCCGCACGAGTCGTTTGATTTTTCTGCGATGC
TGTTTGTGTTGCTGCGAGACACCGAAAGAAGCACGCGAGCGTGTTGAAGG
CGGGGGGCATACAATGGCATGAAGGAGGATTTGTTTCGAGATGATCCAAC
CCCCCGCTCTCCGGGTTGCCCTTCTACATTTAAGATATAAATATAAACAA
AAACGGGTTGTCATAAGTTGGGCGCAAAACATGCCCGAACATGACCTGCC
ACCGGAATGGACAAAAACGCGTGTATCCCTCGCCTGAAATTCAACTTTTA
CACACGAACTAATTTCTTGAAATATTGGTGGGTAGGGGGCGTCAGGGAGA
GGAACCCTTCTGTGTGACTGACCACGGGTTGGAGATTAGTGTTGGATGTC
GAATCTGTTTATTGAATCGATATCCAACACTATTGGAGATAGCTCCTTCC
CGGCAGAGGAAGCGCTGTGAGCGGTGATGAAAAGTGTTGAACGAAAAAGA
ATGGAAAAGTAGACAGAAGTGGGTACGAGTCTTCCCACCCCTTTCTCAGA
CTAAAAGCGGGTACGCGATTTTTGCATTTCGGAGACCAATCGTGACAGGG
AACAGCCGCTCGAAATATTATCATTCCGACGCATGGAAAACATGGGCAGG
GCCCATTCACAGCATGGGCATGAATTTTTACGAACTTCAGGGCACGTCTT
CACCCCATACAGCGCCGCGGCGCACATGGCCTCAACAGGTTGCCCGATTT
TTCGTCCGAAATTGCGGTGGTTATACTCCCACCGAAATTTCCTATTTTTT
TCATGTACACCCACCCGTTTCTGCTGTGTGACCCACTTTTGGCGTGCGGT
GACGTGGAGATCGATTTTCGAATGAAAAAATCGGATGAAAGTGGATACGT
TTCGGGCAAAAGTGGGTCACACAGCAGAAAAAGGTACAGGTGTTCATAAA
ACAAGAAAGTACGTGGTAGATTTCGGTGGGTATGATGTGAAGACAACAAC
AAAACCCGCCGCCGGAAGGAATCCGGACGAAATCGGGCAATCGGGCAACT
TGTTGAGGCCTTGTGCGTAGCGGCGATGTGTAGGAAGGACAAGTACCCGA
AAGTCCGTAGTAGTACTGTACATGTTCATGCTCCCCTGCCCGTGTTTTCC
ATGCATCGGAATGATATTTTGAGTGGTTGTGCCCTGTCACGGAAAAATTA
AAATTGGGTTAGGCCCGATTGTTTCTGCCGCTCCTCCTGCCAACCAATAT
GAATACGAAGAAAGAATAGTAATAGTACGATGGTGATAGGGGTTGCCCCC
TGCCGCATCTCTCACCACGTAGCACGGTTTCATGGAGCGCGGCGGTAGAA
GATTCTTGCTTGGTGTTTTTGTGTGAAAGCATCGAAGTTTGTCCGTTCCC
GGTGGTCTCGTACGGTTCCAACCATGGTTTCGCCGATGGTGGCTCCTCGT
TCCACCACATCACCAGATCTTGTCCATGCGAGAGCGACCATCTTTTCCCC
TTTAACGGTTTGGTCTGAACCGCGCGGGTCATCCATGGTTTCACCGGTTC
CTAAATCAACCAGATTTTTTTGGGGACCCCGGATTCCAAAGTTGCTCCGT
CCATGATCCGGCCCGTGCGGGTCGATCATGGTTACATCGATTACTGTATG
GTTCACCAGGTCTCCCTTCGAGAGAAGCAAGTTGCTTCGTCCGTGATTCG
ACCCGTGCTGAACTTGTCCGTGCGTGTCAACCTTGGTTTCACCGATTATT
TTCTCAACCACATCTTCCAAGTTGATCCGTCCACAGCAGTTCGGCCCCGT
GCTGCTAAATTGTCTGCTCCGCCCGCGGTTCGGTCGGTGCGGGTCAACAA
TTTTTTCACATAGTGGCCATGCCAGAGGAAAGCCACTTGCCCCTTTCCTC
CCTTACCCCGCCCAAGTCAACCACATTGTTCACCAATTGTTGCACTTTTC
TGTAGAAAGTCTATTTATCTCGTCGTCTCAGGCTCGTGGTTGACGAGAAG
TTGCGGCAAAGCTGTCTATGTATCTGACCGGGACACCTCCACTAGATGAC
TCCCCGCAGAATTCGTAGCGCGAAAGGTAGTATTTTGTACAAATTGGAAT
GTTGTGGGAGTGGGTCGAAAGGGCATGTTTTGGGTGTACAACAAGGAGGA
GCCGTTGGACACAAAGGGGTGCACATCACAGGAAATGAGGGGAGAGGGGG
GGGGGGGGTGCTCGGTTGCACCCTGCTGCACCGCGTTGCTGCTCTGACCA
GACACAATGTCCGAAAAGCACACAGCGTTAATACACCGCTACATATTTCT
ACATGCTGTGGGGTTGAACGTGATATACAGTATGCACCAGCCGCGGGCGT
GTGCCCGTGGCCAGAGTAGGTAGGGCCATGCACCAATGCCACGGGGGTCC
CGCGTGCATGTTACCTCCCGCTGTTACAGCAATTTTCCCCGCCGTTTGTG
GGGGAGAAAATATTAGCGTTATGTTATATCTGTGAGGTTGCTTGCGTGCT
TGCGTGCGTGCGTGCGTGCAACCTGCCTCATGCCTCGTGTGCAATGATAG
TGCTGTTTCCCTCATTCGCTTCGTACCCTCTTGCTTCCTTCTCGTACCGC
CCACCCTCATCATCGTGCTTTTTTTGTCTTTCATCGCTTTGTATGCACAG
TTCTTGCCCCTGACACATCCGATTTTTTTTCTATCTTTCACGCCCCCCCT
AAGCCGATTTTTAGTCGGCAGTTCACCTCTTATACCCCCCCCTCCTCCCG
CCCACCGAAACAAATTACGCGCGGCGTGAGCAGGAAGTGGACCTAGAGGA
CTACGTCAACAGGCCCGAGAAAGTAAGCGCGGCTGACATCTCCGCCATCG
CGCAGGAGGCCGGGCTGCAGGCGGTGCGCAAGAACCGATACGTAGTGCTC
GGCAAGGATCTGGACAAGGCCTACAAGAAGCACGTCAACAAGCACGACAC
CGAGCACGCCTTCTACTCCATGTAG AACTCCTACCACGCCTAGTGTAGAT
ACTTTTGAGCCATCATCATTTGGTGGGGGGGGGGGGCGTTGTATTGGTGC
GTGACGGGGGTAGGGTGTGCACTCGCCACCCCCGTGCGCGTGCGGTCGTG
TCGTGGATACGATAGATGTTGCACCTGCCTGTCAACAAGCACAAGAGAGA
CGTATAGAAAGGAAGGGACGTGGGGGTGGCGTTCCATCACGGCGTTCGTT
CATGGCGCTGCTGCCGCTGTGACTGGTTGAGTAGTGGTTGACTGAGTCGG
AAAGAACTCTTTCACGTTCTGAAGTACTGCCTGAATCTACTTTCGCGAAC
GGTGCGGCAGGAATGTTTCACGGAATGTTCCACGTGGTAACGAAATGGCG
TGTCCGTTGTGGTTCTTTGAAGCGATGAAAATATGTTTTTTTCTCCGCAC
GGTCTTGAGAAAACATTGACGCTACGACAAAAGGCGTAGAACACTCCATT
GGAACAAGGTTATCGTGGAACAATTATTGCTGATTTGTCGTGGACCATGA
AATACTACCGAATAGATGTATGAGCCACCCCCCCAAAACCAAACACGTGT
TTTCGTGCGCCAAACAAACGGCCCACCGAGGGGATGATCACCGAGCCCGT
AACCATACAGCAGTGGCCAGGGTGCGGGAACGGCAGTGAAGGTCCTCTCA
ATCT back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:148161..158764+
>mRNA_Ecto-sp6_S_contig104.938.1 ID=mRNA_Ecto-sp6_S_contig104.938.1|Name=mRNA_Ecto-sp6_S_contig104.938.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1248bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:148161..158764+ (Ectocarpus species6 EcLAC_371) back to top