mRNA_Ecto-sp6_S_contig104.936.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI) HSP 1 Score: 3392 bits (8794), Expect = 0.000e+0 Identity = 2040/2202 (92.64%), Postives = 2055/2202 (93.32%), Query Frame = 1 Query: 1 MATFSGGLDGSEGRGIPSAEFVGSCFRKGRKDGLLLYYVEKAPRDYPFEVESKAAGAASLDWSVMRKHLKVDAFCMETFRWYGAKVAEVSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVEATIAGMGALSTKKKPDNAEGMLDGGGEDGTGSWPGGNXXXXXXXXXXDAKDTLFLKELGTKGQEWEANGRSFVRRPPPPPIPSPAITRPPPDSRMLTAPNRGPFSKPAPNASAAXXXXXXXXXXXKPAASAGPIRIAANLNAMGGGVRAGXXXXXXVLSGSYKAEGNGAPKLIGGPKPXXXXXXXXXXXDFLSQGGGAGTGGGGALPRPVPAVKAVKSGPTAEERLQQRIAEKLEKQAKAEKLAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQXXXKARLLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLEQKRLEKXXXXXXXXXXXXXXXXXRGIEKERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPGQLPCPSGFPPSAFGDVVSAWACLQLFGTLMHLKRFSLDELMVGLANGAPAVEARDGSAPTPFFSSQAGDPPADAAEDLLDIIPAPVGSDPNEDAGGVGGYGHGMGGVLRRVETRRMAAARXXXXXXXXXXXXXXXXXXXXXXXXLDPLGEVMRILRHLLKSEEAKPFADVPSDDDVAPESESGLGDDGGFGGDRDGDGGVVKKEEEKAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAAAAA----GREGLEEGRVLLRSDTDSKGARRGSAGCKDPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHNRRGTEAEMITARMLMESPDVKTVRELGSVKVRLRPLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARVSQLKALHKWLDRRGVRERTLKASAIAALREHLIANLGVSAQELEPVRRPYGGSSRGRSEVDVFGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKVLSDVLLTDGQGEPLQQALDYAAIDMVKGALLESESRLHHSFVVGPGWEGQACTEWRLGVSFAGQGADQNRGGGXGRETDVPAGGATPSFTEPXXXXXXXATSELVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWEAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLGFDTGTAEEDDIGRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTPDEEEKQKNDGNDSGDAKKKPPKLDETPEARSPTANGVSPTPTSPGXXXXXXXXXXXQXXXXXXXXXXXTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------VAPGGVLRVSMRLSNEMPEFVVVTSKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLMVEWDDEAGMNTVNPWEVEAVSAATAAARRRAPGMPGVGEHIG 6564
MATFSGGLDGSEGRGIPSAEFVGSCFRKGRKDGLLLYYVEKAPRDYPFEVESKAAGAASLDWSVMRKHLKVDAFCMETFRWYGAKVAEVSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVV ATIAGMGALSTKKKPDNAEGMLDGGGEDG GSWPG N DAKDTLFLKELGTKGQEWEANGRSFVRRPPPPPIPSPAITRPPP+SRMLTAP+RGPFSKPAPNASA+ KPAA+AGPIRIAANLNAMGGGVRAGXXXXXXVLSGSYKAEG+GAPKLIGGPKPXXXXXXXXXXX F QGGG GALPRPVPAVKAVK+GPTAEERLQQRIAEKLEKQAKAEKLAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQXXXKARLLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLEQKRLEKXXXXXXXXXXXXXXXXXRGIEKERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPGQLPCP GFPPSAFGDVVSAWACLQLFGTLMHLKRFSLDELMVGLANGAPAVEA DG PP DAAEDLLDIIPAPVGSDPNEDAGGVGGYG G VLRRVETRRMAA XXXXXXXXXXXXXXXXXXXXXXXXLDPLGEVMRILRHLLKSEEAKPFADVPSDDDV PESESGLGDDGGF KAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAA GR GLEEGRVLLRSDTDS+GARRG+ GC DPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVK+VQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHNRRGTEAEMITARMLMESPDVKTVRELGSVKVRL+PLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARVSQLKALHKWLDRRGVRERTLKA ALREHLIANLGVSAQELEPVRRPYGGSSRGRS+VDV GGGGNEG DGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKVLSDVLLTDGQGEPLQQALDYAAIDMVKGALLESESRLHHSFVVGPGWEGQACTEWRLGVSFAGQGADQNRGGG GRETDVPAGGATPSFTEP ATSELVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDW+AAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLGFDTGTAEEDDIGRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTPDEEEK + DG+DSGDAKKKPPKLDETPEARSPTANGVSPTP SPGXXXXXXXXXXX XXXXXX XXXXXXXXXXXXX XXXXX PD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V PGGVLRVSMRLSNEMPEFVVVTSKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLMVEWDDEAGMNTVNPWEVEAVSAATAAARRRAPG+PGVGEHIG
Sbjct: 1 MATFSGGLDGSEGRGIPSAEFVGSCFRKGRKDGLLLYYVEKAPRDYPFEVESKAAGAASLDWSVMRKHLKVDAFCMETFRWYGAKVAEVSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVAATIAGMGALSTKKKPDNAEGMLDGGGEDGPGSWPGANGDNNGCSDSVDAKDTLFLKELGTKGQEWEANGRSFVRRPPPPPIPSPAITRPPPNSRMLTAPDRGPFSKPAPNASASSAASSS-----KPAANAGPIRIAANLNAMGGGVRAGXXXXXXVLSGSYKAEGSGAPKLIGGPKPXXXXXXXXXXXXFYGQGGGXXXXXXGALPRPVPAVKAVKTGPTAEERLQQRIAEKLEKQAKAEKLAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQXXXKARLLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLEQKRLEKXXXXXXXXXXXXXXXXXRGIEKERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPGQLPCPRGFPPSAFGDVVSAWACLQLFGTLMHLKRFSLDELMVGLANGAPAVEA-DG-------------PPDDAAEDLLDIIPAPVGSDPNEDAGGVGGYGEG---VLRRVETRRMAAXXXXXXXXXXXXXXXXXXXXXXXXXXLDPLGEVMRILRHLLKSEEAKPFADVPSDDDVTPESESGLGDDGGFX--XXXXXXXXXXXXXKAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAXXXXXXXXGRGGLEEGRVLLRSDTDSEGARRGATGCNDPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKRVQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHNRRGTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARVSQLKALHKWLDRRGVRERTLKA----ALREHLIANLGVSAQELEPVRRPYGGSSRGRSDVDVLGGGGNEGXXXXXXXXXXDGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKVLSDVLLTDGQGEPLQQALDYAAIDMVKGALLESESRLHHSFVVGPGWEGQACTEWRLGVSFAGQGADQNRGGGGGRETDVPAGGATPSFTEPKKQQQQ-ATSELVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLGFDTGTAEEDDIGRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTPDEEEKHQTDGSDSGDAKKKPPKLDETPEARSPTANGVSPTPPSPGXXXXXXXXXXXPQASPSXXXXXXXXXXXXXXXXXXXXXXGEASPSSAATCAPGAXXXXXTPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAPVAPAVVPGGVLRVSMRLSNEMPEFVVVTSKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLMVEWDDEAGMNTVNPWEVEAVSAATAAARRRAPGIPGVGEHIG 2173
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE) HSP 1 Score: 1909 bits (4946), Expect = 0.000e+0 Identity = 1278/1744 (73.28%), Postives = 1304/1744 (74.77%), Query Frame = 1 Query: 1 MATFSGGLDGSEGRGIPSAEFVGSCFRKGRKDGLLLYYVEKAPRDYPFEVESKAAGAASLDWSVMRKHLKVDAFCMETFRWYGAKVAEVSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVEATIAGMGALSTKKKPDNAEGMLDGGGEDGTGSWPGGNXXXXXXXXXXDAKDTLFLKELGTKGQEWEANGRSFVRRPPPPPIPSPAITRPPPDSRMLTAPNRGPFSKPAPNASAAXXXXXXXXXXXKPAASAGPIRIAANLNAMGGGVRAGXXXXXXVLSGSYKAEGNGAPKLIGGPKPXXXXXXXXXXXD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLSQGGGAGTGGGGALPRPVPAVKAVKSGPTAEERLQQRIAEKLEKQAKAEKLAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQXXXKARLLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLEQKRLEKXXXXXXXXXXXXXXXXXRGIEKERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPGQLPCPSGFPPSAFGDVVSAWACLQLFGTLMHLKRFSLDELMVGLANGAPAVEARDGS-------------------------APTPFFSSQAGDPPADAAEDLLDIIPAPVGSDPNEDAGGVGGYG---------------------------------------------------------------------------------------------HGMG-----------GVLRRVETRRMAAARXXXXXXXXXXXXXXXXXXXXXXXXLDPLGEVMRILRHLLKSEEAKPFADVPSDDDVAPESESGLGDDGGFGGDRDGDGGVVKKEEEK---AEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAAAAAGREGLEEGRVLLRSDTDSKGARRGSAGCKDPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHNRRGTEAEMITARMLMESPDVKTVRELGSVKVRLRPLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARV-----SQLKALHKWLDRRGVRERTLKASAIAALREHLIANLGVSAQELEPVRRPYGGSSRGRSEVDVFGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKVLSDVLLTD 4248
MATFSGGLDGSEGRGIPSAEFVGSCFRKGRKDGLLLYYVEKAPRDYPFEVESKAAGAASLDWSVMRKHLKVDAFCMETFRWYGAKVAEVSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVV ATIAGMGALSTKKKPDNAEGMLDG GEDG GSWPG N DAKDTLFLKEL TKGQEWEANGRSFVRRP D RMLTAP+RGPFS+PAPNASA KPAA+AGPIRIAANLN+MGGG+R GXXXXXXVLSGSYKAEG+GAPKL+GGPKP XXXXXXXXX FLSQG GAGTGGGGALPRP AVKAVK+GPTAEERLQQRIAEKLEKQAKAEKLAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQXXXKARLLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AKLEQKRLEKXXXXXXXXXXXXXXXXXRGIEKERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPG+LPCP GFPPSAFGDVVSAWACLQLFGTLMHLKRFSLDELMVGLANGAP V+ARDGS APTPFFSSQAG PPADAAEDLLDIIPAPVGS PNEDAGGVGGYG HG G+LRRVETRRMAA XXXXXXXXXXXXXXXXXXXXXXXXLDPLGEVMRILRHLLKSEEAKPFADVPSDDDVAPESES LGDDGGFGG G+GGVV KEEEK AEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGS A AAAGR LEEGRVLLRSDTDS+ ARRG+AGC DPLEMVRQMGSEEY+RWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHNRR TEAEMITARMLMESPDVKTVRELGSVKVRL+PLGLDRDRRRYWLFATGE L ++ + V S ++ W V S AALREHLIANLGVSAQELEPVRRP+GGSSRGRS+VD FGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGL ALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKT GWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLT+MPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVK + T+
Sbjct: 122 MATFSGGLDGSEGRGIPSAEFVGSCFRKGRKDGLLLYYVEKAPRDYPFEVESKAAGAASLDWSVMRKHLKVDAFCMETFRWYGAKVAEVSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVAATIAGMGALSTKKKPDNAEGMLDGVGEDGPGSWPGANGDNNGSSDSVDAKDTLFLKELATKGQEWEANGRSFVRRPXXXXXXXXXXXXXXXDRRMLTAPDRGPFSRPAPNASATAAASSF-----KPAANAGPIRIAANLNSMGGGIRTGXXXXXXVLSGSYKAEGSGAPKLMGGPKPGVXXXXXXXXXXXXXXXXXXXXXXPGAAXXXXXXXXXXXXXKLSGPKPGXXKLIGAPKLSATKPXVXKPSXXXXXXXXXXXXXXGAAHKXXXXXXXXGSKGGPRPGETVGVPKQMGGGXXXXXXXXXXXXXXXXXXXXXXVMKQGASAMRQDPRGMQHVQGGRXXGGMKPAGXXXXXXXXXXXXXXXXXXXXXXKRGVEGAGGFLSQGRGAGTGGGGALPRPGSAVKAVKTGPTAEERLQQRIAEKLEKQAKAEKLAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQXXXKARLLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKLEQKRLEKXXXXXXXXXXXXXXXXXRGIEKERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPGKLPCPRGFPPSAFGDVVSAWACLQLFGTLMHLKRFSLDELMVGLANGAPEVQARDGSSPFPSQQQQNDHLGTAWAGHTSDGNAPTPFFSSQAGGPPADAAEDLLDIIPAPVGSGPNEDAGGVGGYGLRCGREGKQETYWRNLLPSVNRAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGGAPETTLPGLRDSRELVQASPHGFPELLRLVAIHREGLLRRVETRRMAAXXXXXXXXXXXXXXXXXXXXXXXXXXLDPLGEVMRILRHLLKSEEAKPFADVPSDDDVAPESESDLGDDGGFGG--QGEGGVVNKEEEKEEKAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSTAVAAAGRGELEEGRVLLRSDTDSEDARRGAAGCNDPLEMVRQMGSEEYKRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHNRRSTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGE--ALTTGYSWSTTRFGGVTPGFPSSRRSTSGWT----VEASESAPSRRAALREHLIANLGVSAQELEPVRRPFGGSSRGRSDVDRFGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGLSALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTCGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTEMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKACDRFVKTN 1852
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE) HSP 1 Score: 1071 bits (2771), Expect = 0.000e+0 Identity = 651/762 (85.43%), Postives = 658/762 (86.35%), Query Frame = 1 Query: 4483 PSFTEPXXXXXXXATSELVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWEAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLGFDTGTAEEDDIGRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTPDEEEKQKNDGNDSGDAKKKPPKLDETPEARSPTANGVSPTPTSPGXXXXXXXXXXXQXXXXXXXXXXXTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------PDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------VAPGGVLRVSMRLSNEMPEFVVVTSKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLMVEWDDEAGMNTVNPWEVEAVSAATAAARRRAPGMPGVGEHIG 6564
P F EP A SE VGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRML+IEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDW+AAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLS+EAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAEL KTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLGFDTG AEEDD+GRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTPDE EKQK DGNDS D KKKP LDETPEARSPTANGVSPTP PG XXXXXXXXX XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P +P XXXXXXXXXXXXXXXXXXXXXXXXXX +APGGV RVSMRLSNEMPEFVVV SKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECL+VEWDDEAGMNTVNPWEVEAVSAATAAARRRAPGMPGVGEHIG
Sbjct: 2 PYFAEPLLQQ---AASEPVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLHIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSMEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELSKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLGFDTGAAEEDDVGRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTPDEGEKQKTDGNDSSDVKKKPSILDETPEARSPTANGVSPTPLWPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASQPRSPSTAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPAIAPGGVFRVSMRLSNEMPEFVVVASKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLIVEWDDEAGMNTVNPWEVEAVSAATAAARRRAPGMPGVGEHIG 760
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.820e-46 Identity = 115/336 (34.23%), Postives = 171/336 (50.89%), Query Frame = 1 Query: 4642 VEELARRMLYIEALVFKQDTV--VDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWEAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQG-GSSRRAKGAQPFATIEL----------------EPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELA 5592
V +L +L +E+ + + TV VD RW + RRRKWR FV A+T+ QL+ AW A + +DW A ++ L RR FL +P+ RN+MPD GD V+Y+GDGH +L + G +WG PP G V V+ I+Y G QPFAT +L EP E LGL PP + G LNRLL++++ F+ PV + PDY +V++ PMDL +W++ Y ++E+F+++LALV NC YC ++P L + V +TL P+L + + D L +++I+A P+ A
Sbjct: 1685 VSDLVPALLDLESALAHKQTVLGVDGRW-QGARRRKWRAFVARARTSAQLVIAWSALEACLDWATAAAVWAALSRRAFLQNIPSQGRNTMPDIGDVVVYFGDGHTAALTFDKALGLSAMWGGQPPVEGAVLLCRVQEIAYCTGVPQGSELSPMQPFATFKLXXXXXXXXQVIPSDHQEPEVPTLPKEPLGLKPPGDSRGMLNRLLRRSLAVASRTPGSQPFMQPVDYSTNPDYREVVARPMDLGTIWRQTVEGHYATLEQFEQDLALVLDNCHAYCDSRYPWLSKDCERVVKAARDTLAHPELNQQAREAFFD-----TLLPLSYTSSITAKPDTA 2014
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: A0A5D6YQF5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQF5_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.560e-29 Identity = 79/245 (32.24%), Postives = 128/245 (52.24%), Query Frame = 1 Query: 4732 RRRKWRTFVNNAQTAPQLLAAWGAFKD-VIDWEAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWG-SDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELG-----LLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAA 5445
+RR+WR + A T QL D ++ +A Y+ LDR+ + L RN +P+ G +V+Y+GDGH +L+ +AKA + + S+PPR V+S+SYH GG P+A + L P P + + L P P +L+R+L + V ++ + D FL PVS +P+Y +++ +PMDL+ + ++ A YR + ++ L+ SNC L+C +FP LPP A
Sbjct: 1552 KRREWRLALEGACTYAQLAFLLHLLLDECVNVDAFMDQYARLDRKDWFKLRAKESRNFIPEVGKDVVYFGDGHAQALKEDAKAKKKRLAKKSEPPRSRATLVCAVESVSYHHGGGD-------PYALVVLAPRPDVSGYSFVRAPGSVLCPQPSPAQRLSRILMRVVSKLKLQTDAGPFLEPVSDREFPEYKEIVLQPMDLSAVTRKVRALEYRDAGQLLADMRLICSNCELFCDGRFPALPPLA 1789
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: A0A8K1CUW3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUW3_PYTOL) HSP 1 Score: 140 bits (352), Expect = 3.500e-29 Identity = 94/306 (30.72%), Postives = 153/306 (50.00%), Query Frame = 1 Query: 4579 VLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVF----KQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAF-KDVIDWEAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGY-RGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSF-----EELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNV 5463
+ T+ S G S + +EL + +EA + +DT+ R S +RR+W+ + ++T Q++ F + I+ EA L+R+ ++ L P RN +P+ G V+Y+GDGH +L+ +AK R SDPP T TV ISY+ GG P+A + + P +S E L P P +L R L++ V ++ D FL PVS +P+Y ++I PMDL+K+ + C Y+SV+ F ++ L++SNC ++C+ +FP LPP A V++
Sbjct: 1481 ITSTEADHSAGWKSRVQAASTCQELQVLLAELEAAIVGSRGAEDTI---RVSWKRKRREWQLSLEGSRTFSQVVFLLHLFLAECINVEAFMDLSIRLERKDWIKLRPKESRNFIPEVGKHVVYFGDGHAQALKEDAKTKKKRFTRKSDPPIHKTTLLCTVAGISYYHGGGD-------PYALLVIHPADDLQSHAIVRQEGSFLCPQPSPLQRLARTLQRIVTKIKLNPDAGPFLEPVSDRDFPEYKEIIPHPMDLSKISAKIKGCEYKSVDSFLSDVKLMSSNCTVFCEGRFPALPPLARNLVDL 1776
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: A0A3M6VTY9_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTY9_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.020e-28 Identity = 86/251 (34.26%), Postives = 128/251 (51.00%), Query Frame = 1 Query: 4732 RRRKWRTFVNNAQTAPQL-LAAWGAFKDVIDWEAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGY-RGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELG-----LLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNV 5463
+R +WR + + T QL L ++ I+ EA Y LDR+++L L P +N +P+ G V+Y+GDGH L+L+ + K+ R SD P TV+ +SYH GG P+A L+P P E + L P +L R+ + + ++ AD FL PVS +P Y +VI PMDL + ++ S+ Y + EF +L LV NC+L+C+ +FPTLPP A VNV
Sbjct: 1493 KRHEWRLALKGSCTYAQLVLLLHLLLEEFINVEAFLDLYIRLDRQEWLKLRPKDTQNFIPEVGMSVVYFGDGHALALKEDEKSKRKRFTQKSDTPVRNATVICTVEKVSYHHGGGD-------PYALAVLQPIPDMAQHESIRKPGTHLCPLPSREQRLARVFLRILAKLKTLADAGPFLEPVSAQEFPQYKEVILHPMDLGTMTEKASSLGYNNAAEFMSDLRLVRDNCQLFCEGRFPTLPPLAHNLVNV 1736
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: A0A397EKR1_9STRA (Bromo domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EKR1_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.650e-28 Identity = 80/251 (31.87%), Postives = 127/251 (50.60%), Query Frame = 1 Query: 4702 VVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAF-KDVIDWEAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFG--KLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAA 5445
++ A W + +RR+WR+ V+ A+T+ Q++ + ++ + +A +LDR ++L L P RN PD GD+V+Y+GDGH +++ + + D P GT ISYH G P+A + LEP G + T P KL R+L + L PVS+ +P Y D++ PMDL K+ + +Y SV+ F R++ L+A NC+L+C+ +FPTLPP A
Sbjct: 279 LLQAGWKQ--KRREWRSSVDAARTSAQVMVLFECLVRNCLVLDAFVDYVVQLDRNEWLKLRPKPARNFCPDVGDQVVYFGDGHAQAVQLDQRKKNNKPVKCDAPLVGTSLVCRATHISYHHGSGD-------PYAIVTLEPEMTAALRRPPGSVLCTSPSSVQKLGRILSRXXXXXXXXXXXXXXLDPVSKADFPTYTDIVLHPMDLGKIAAQIKDGKYSSVDAFVRDVTLMADNCQLFCEGRFPTLPPMA 520
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: A0A418B6I9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B6I9_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.770e-28 Identity = 91/268 (33.96%), Postives = 136/268 (50.75%), Query Frame = 1 Query: 4663 MLYIEALVFKQ--DTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKD---VIDWEAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFG--KLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAA 5445
+L +E +F D +V W +R WR+ V ++T PQLL A D ++D A +LDR+++L L P RN P+ +V+Y+GDGH +++A+ K + D P GT V ISYH G P+A + L P G T P KL R+L + V +R D FL PVS+ +P Y D+I PMDL+K+ + +Y++V+EF ++ L+A NC+L+C+ +FPTLPP A
Sbjct: 778 LLELEQYLFTNLNDDLVQDVWKR--KRHDWRSAVEASRTFPQLLVLVMALLDKCFIVD--AFIDYVVQLDRKEWLKLRPKPSRNFCPEVDQQVVYFGDGHDQAVKADRKN--KKPVKCDAPLVGTTLICRVTHISYHHGSGD-------PYAMLTLRPESDAALARAPGSYLCTSPSAVQKLGRILARIVSKLRAEPDAGPFLDPVSKADFPTYTDIIVHPMDLSKISQNVHDGKYKTVDEFVGDVKLMADNCQLFCEGRFPTLPPMA 1032
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Match: A0A024TEJ5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEJ5_9STRA) HSP 1 Score: 136 bits (342), Expect = 4.830e-28 Identity = 91/268 (33.96%), Postives = 136/268 (50.75%), Query Frame = 1 Query: 4663 MLYIEALVFKQ--DTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKD---VIDWEAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFG--KLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAA 5445
+L +E +F D +V W +R WR+ V ++T PQLL A D ++D A +LDR+++L L P RN P+ +V+Y+GDGH +++A+ K + D P GT V ISYH G P+A + L P G T P KL R+L + V +R D FL PVS+ +P Y D+I PMDL+K+ + +Y++V+EF ++ L+A NC+L+C+ +FPTLPP A
Sbjct: 1298 VLELEQYLFTSLNDDLVQDVWKR--KRHDWRSAVEASRTFPQLLVLVMALLDKCFIVD--AFIDYVVQLDRKEWLKLRPKPSRNFCPEVDQQVVYFGDGHDQAVKADRKN--KKPVKCDAPLVGTTLICRVTHISYHHGSGD-------PYAMLTLRPESDAALARAPGSYLCTSPSAVQKLGRILARIVSKLRAEPDAGPFLDPVSKADFPTYTDIIVHPMDLSKISQNVHDGKYKTVDEFVGDVKLMADNCQLFCEGRFPTLPPMA 1552 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.936.1 >prot_Ecto-sp6_S_contig104.936.1 ID=prot_Ecto-sp6_S_contig104.936.1|Name=mRNA_Ecto-sp6_S_contig104.936.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=2189bp MATFSGGLDGSEGRGIPSAEFVGSCFRKGRKDGLLLYYVEKAPRDYPFEVback to top mRNA from alignment at Ecto-sp6_S_contig104:121447..144286- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig104.936.1 ID=mRNA_Ecto-sp6_S_contig104.936.1|Name=mRNA_Ecto-sp6_S_contig104.936.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=22840bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:121447..144286- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:121447..144286- >mRNA_Ecto-sp6_S_contig104.936.1 ID=mRNA_Ecto-sp6_S_contig104.936.1|Name=mRNA_Ecto-sp6_S_contig104.936.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=6567bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:121447..144286- (Ectocarpus species6 EcLAC_371)back to top |