mRNA_Ecto-sp6_S_contig103.908.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig103.908.1
Unique NamemRNA_Ecto-sp6_S_contig103.908.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.908.1 vs. uniprot
Match: D7G0T6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T6_ECTSI)

HSP 1 Score: 863 bits (2229), Expect = 5.790e-316
Identity = 429/438 (97.95%), Postives = 432/438 (98.63%), Query Frame = 1
Query:    1 MRLSRLPLIFGVLTGSILVCFPSAVPAESTQPDHLTLDWSEWIDPPVAPVTDNWATSSMEALLTTPCVDAAQTGGCHQLRPAQVRTLVHDCARRLKVAGDLCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKHEMVHSDLDFSTGNLETRFYWAPFCFGPESVGAKLATVMDGVQTAKRGDKRSVIITAFGVHDSYELPLLVKGSASTSYMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAWADPTAEKGQLSKAVHASPNTTTRSTTETNGVSFSFGAPGTTAATDPTPPLVFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAGEGNEDAEGGIYLVDDSVSLFRNLSCYRESNPIHFHEPVKLVEGKMLWDLLALVERESASPLVP 1314
            MRLSRLPLI GVLTGS LVCFPSAVPAESTQPDHLTLDWSEWIDPPVAPVTDNWATSSME LLTTPCVDAAQTGGCHQLRPAQVRTLVHDCARRLKVAGDLCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKH+MVHSDLDFSTGNLETRFYWAPFCFG ESVGAKLATVMDGV+TAKRGDKR+VIITAFGVHDSYELPLLVKGSASTSYMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAWADPTAEKGQ SKAVHASPNTTTRSTTETNGVSFSFGAPGTTAATDPTPPLVFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAGEGNEDAEGGIYLVDDSVSLFRNLSCYRE NPIHFHEPVKLVEGKMLWDLLALVERESASPLVP
Sbjct:    1 MRLSRLPLISGVLTGSTLVCFPSAVPAESTQPDHLTLDWSEWIDPPVAPVTDNWATSSMEELLTTPCVDAAQTGGCHQLRPAQVRTLVHDCARRLKVAGDLCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKHDMVHSDLDFSTGNLETRFYWAPFCFGSESVGAKLATVMDGVKTAKRGDKRTVIITAFGVHDSYELPLLVKGSASTSYMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAWADPTAEKGQWSKAVHASPNTTTRSTTETNGVSFSFGAPGTTAATDPTPPLVFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAGEGNEDAEGGIYLVDDSVSLFRNLSCYRERNPIHFHEPVKLVEGKMLWDLLALVERESASPLVP 438          
BLAST of mRNA_Ecto-sp6_S_contig103.908.1 vs. uniprot
Match: A0A6H5L6U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U4_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 2.600e-130
Identity = 225/444 (50.68%), Postives = 275/444 (61.94%), Query Frame = 1
Query:   46 SILVCFPSAVPAESTQPDHLTLDWSEWIDPPVAPVTDNWATSSMEALLTTPCVDAAQTGGCHQLRPAQVRTLVHDCARRLKVAGDLCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKHEMVHSDLDFSTGNLETRFYWAPFCFGPESVGAKLATVMDGVQTAKRGDKRSVIITAFGVHDSYELPLLVKGSASTSYMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAW--ADPTAEKGQLSKAVHASPNTTTR-STTETN-------------------GVSFSFGAPGTTAATDPTPPLVFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAGEGN--EDAEGGIYLVDDSVSLFRNLSCYRESNPIHFHEPVKLVEGKMLWDLLALVERESASP 1305
            ++L C  S V A S  P    LDWSEW DPP + + ++ A S M++             G   +  A VR LV  CA RL+++ D+CG  E P  +D YRL HM SG LPCGFEER   E +ED+ASK++FHFIGDST RRLGESFVSIFTG+GS H +V  D++FS+GNL+  FYWAP C GPESVGA L TVMD V  AK G KR+VIITAFGVHD++EL     G  S SY   LP D V+   +R A LGAC+  T QLV+ AAA  +    A P  E+     A H  PN +T+    ET+                   G   +  A    AA+ P  PL+FLMQNNRYPP S E+ + E+L RIQR  V EWEA EG+  +D E G++LVDDSV L+ NLSCYR +NPIHF EPVKL+EGKMLWDLL LV+  S  P
Sbjct:   13 ALLACLASVVCAASVYPSDPHLDWSEWDDPPASHLNNDPAKSIMDS------------NGRQHVDEAGVRRLVTTCALRLELSADVCGKGEVPDPQDAYRLHHMHSGGLPCGFEERLGKEAMEDIASKYSFHFIGDSTSRRLGESFVSIFTGRGSTHPVVQRDINFSSGNLKVHFYWAPLCSGPESVGAMLTTVMDAVLAAKDG-KRAVIITAFGVHDAFELQHAANGHGSPSYQSTLPQDIVEKDGMRAAALGACRDATTQLVRTAAATAVPGTAAPPVEEEQSPGDAQHQLPNVSTQVGRHETSQKQAAGIPPNNVRGGSVGAGKEDALDASAPPAASGPLQPLLFLMQNNRYPPGSVENAFQEDLHRIQRQAVGEWEASEGSKGDDGERGLFLVDDSVGLYGNLSCYRSANPIHFDEPVKLMEGKMLWDLLVLVDNGSVLP 443          
BLAST of mRNA_Ecto-sp6_S_contig103.908.1 vs. uniprot
Match: D7G0V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V6_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 8.770e-100
Identity = 200/447 (44.74%), Postives = 247/447 (55.26%), Query Frame = 1
Query:   46 SILVCFPSAVPAESTQPDHLTLDWSEWIDPPVAPVTDNWATSSMEALLTTPCVDAAQTGGCHQLRPAQVRTLVHDCARRLKVAGDLCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKHEMVHSDLDFSTGNLETRFYWAPFCFGPESVGAKLATVMDGVQTAKRGDKRSVIITAFGVHDSYELPLLVKGSASTSYMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAW--ADPTAEKGQLSKAVHASPNTTTR------STTETNGVSFS-----------------FGAPGTTAATDPTPPLVFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAGEGN--EDAEGGIYLVDDSVSLFRNLSCYRESNPIHFHEPVKLVEGKMLWDLLALVERESASP 1305
            ++L C  S V A    P    LDWSEW  PP + + D+ A S+M+             GG   +  A VR        RL  AG                         PC  +ER   + +E +ASK++FH IGDST RRLGESFVSIFTG+GS H +   D DFS+GNL+  FYWAP C GPESVGA LA+VMD V+ AK G KR+VIITA+GVHD++EL     G  S SY  ALP D V+   +R A LGAC+ TT QLV+AAAA  +    A P  E+          PN +T+       T+E                         GA    AA+ P  PL+FLMQNNRYPP S E+ + E+L  IQR  V EWEA EG+  +  E G++LVD+SV L+ NLSCYR +NPIHF EPVKL+EGKMLWDLL LV+  S  P
Sbjct:   13 ALLACLASVVLAAPVYPRDPHLDWSEWDAPPASHLKDDPAKSTMDG------------GGRQHVDDAGVR--------RLHPAG-------------------------PCVSQERLGKDAMEYIASKYSFHLIGDSTSRRLGESFVSIFTGRGSIHRIAQRDRDFSSGNLKVHFYWAPLCSGPESVGAMLASVMDAVRAAKDG-KRAVIITAYGVHDAFELHHAANGHGSPSYKSALPQDVVEKDGMRAAALGACRDTTTQLVRAAAATAVPGTEAPPVEEEQSPGDGRRQLPNVSTKVEVGPHETSEKQAAGIPPHNVRGGSVGAGNEDTLLGASAPPAASGPLQPLLFLMQNNRYPPGSVENAFQEDLHIIQRQVVGEWEASEGSKGDGGERGLFLVDNSVGLYGNLSCYRNANPIHFDEPVKLMEGKMLWDLLVLVDNGSVLP 413          
BLAST of mRNA_Ecto-sp6_S_contig103.908.1 vs. uniprot
Match: D7FZD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD7_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 3.020e-54
Identity = 131/357 (36.69%), Postives = 169/357 (47.34%), Query Frame = 1
Query:  220 GGCHQLRPAQVRTLVHDCARRLKVAGDLCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKHEMVHSDLDFSTGNLETRFYWAPFCFGPESVGAKLATVMDGVQTAKRGDKRSVIITAFGVHDSYELPLLVKGSASTSYMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAWADPTAEKGQLSKAVHASPNTTTRSTTETNGVSFSFGAPGTTAATDPTPPLVFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAGEGNEDAEGGIYLVDDSVSLFRNLSCYRESNPIHFHEPVKLVEGKMLWDLLALVER 1290
            GG H L        V  CA RL + G  C  + +     D+R+P M SG LPCGFE R P    ED+AS++  HF+GDST RRL ESF+SI TG  S H   H   + +   L+  F+WAP+C   +     L  +MD    A  G +R++I+TAFGV DS                         +G    A LG C      LVQ A         P       ++ + ASP                              PLVFL+QNN + P S +D +L +L +IQR  V       G ++A   +YLV D  S+F  LSCYR S  IHF++PVKLVEGKMLWDL+ LV R
Sbjct:   63 GGLHDL--------VRQCAERLDLPGYTCEKNSSSA---DFRIPLMGSGDLPCGFETRLPTSTFEDLASRYAIHFMGDSTSRRLVESFISIATGNRSAHVYYHESRNLTVDGLQVNFHWAPYC--RQVKNESLHEIMDN--QALDGGRRAIIVTAFGVWDS------------------------SHGGGDEAALGVCADAVRSLVQVA--------QPPPAGSTTAENIAASP------------------------------PLVFLLQNNPFLPGSEQDLFLRDLHQIQREIVDS-----GEQEA---VYLVHDRESIFNRLSCYRMSESIHFNDPVKLVEGKMLWDLIELVAR 334          
BLAST of mRNA_Ecto-sp6_S_contig103.908.1 vs. uniprot
Match: A0A6H5JGU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU9_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 4.400e-49
Identity = 144/425 (33.88%), Postives = 196/425 (46.12%), Query Frame = 1
Query:  208 AAQTGGCHQLRPAQVRTLVHDCARRLKVAGDLCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKHEMVHSDLDFSTGNLETRFYWAPFCFGPESVGAKLATVMDGVQTAKRGD-----------------KRSVIITAFGVHDSYELPLLVKGSASTS-YMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVM------------------AWADPTAEKGQLSKAVHAS---PNTTTRSTTETNGVSFSFGAPGTTA---------------------ATDPTPPLVFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAGEGNEDAEGG-------IYLVDDSVSLFRNLSCYRESNPIHFHEPVKLVEGKMLWDLLAL 1281
            A Q GG H+L        V DCAR+L + G  C   + PV++D YR+P MESG   CGFE   P+E L D+A K+ F FIGDST RRL ESFVSI +G+ S H +VH  +D S G+L+  F WAP C     + A +   + G +++  G                  +R+VI TAFGVHD+ EL    +       Y   LP + V       A L  C+  T +LV+ AAA                     + ++ T E G+    V+A         +      GVS       +                              LVFL+QNN + P S  D +L++L RIQ   + E  A +G E            ++L+ D  SL+ ++SCYR    IHFHEPVKLVEGKMLW L+ +
Sbjct:  223 AGQPGGVHRL--------VSDCARQLMLPGFSC---DEPVLQDQYRVPLMESGNASCGFETLMPDEKLLDLALKYEFLFIGDSTTRRLAESFVSIVSGRASTHPVVHHRIDMSRGDLKVTFLWAPCCSVDGGISAAVRDAL-GFRSSTYGSGNNNDGXXXXXXENGSPRRTVIFTAFGVHDATELRKAERDPELNQWYPMGLPQEAVAAQGPTAAALETCRDATRELVEVAAAXXXXXXXXXXXDGGGDVGNNPSLSEATGEGGEGQVVVNADGRRDGIADKKLRGGGGVSSEVAVHESDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFLLQNNPFNPRSELDYFLQQLHRIQEQVIDEAAAKQGCEXXXXXXXXXXXRVFLLRDRDSLYSSMSCYRIDGSIHFHEPVKLVEGKMLWHLVEI 635          
BLAST of mRNA_Ecto-sp6_S_contig103.908.1 vs. uniprot
Match: D7FUL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL3_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 3.210e-43
Identity = 148/446 (33.18%), Postives = 192/446 (43.05%), Query Frame = 1
Query:  208 AAQTGGCHQLRPAQVRTLVHDCARRLKVAGDLCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKHEMVHSDLDFSTGNLETRFYWAPFCFGPESVGAKLATVMD------GVQTAKRGD-----------KRSVIITAFGVHDSYELPLLVKGSASTS-YMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAWA-------------------DPTAEKGQLSK-----AVHASPNTTTRSTTETNG-----------------VSFSFGAPGTTAATDPTPPL-------------VFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAG--------EGNEDAEGG----------IYLVDDSVSLFRNLSCYRESNPIHFHEPVKLVEGKMLWDLL 1275
            A Q GG H+L        V DCAR+L + G  C   + PV+ D YR+P MESG   CGFE R P+E L D+ASK+ F FIGDST RRL ESFVSI +G+ S H +VH  +D S G+L+  F WAP C     V A +   +       G      GD           +R+VI TAFGVHD+ EL    +       Y   LP   V       A L  C+  T +LV+ AA                          DP+  +          AV+A       +  +  G                 V  S G                           VFL+QNN + P S  D +L++L RIQ   + E  A         E ++D E            ++L+ D  SL+ ++SCYR    IHFHEPVKLVEGKMLW L+
Sbjct:  195 AGQPGGVHRL--------VSDCARQLVLPGFGC---DEPVLADQYRVPLMESGDASCGFETRMPDEKLLDLASKYEFLFIGDSTTRRLAESFVSIVSGRASTHPVVHHRIDMSRGDLKVTFLWAPCCSVGGGVSAAVRDALGFRSSTYGSDNNYDGDDXXXXXXXXSPRRTVIFTAFGVHDATELRKAERDPELNQWYPMGLPQAAVATDGPTAAALQTCRDATRELVEVAAXXXXXXXXXXXXXXXXXXXXXXXXXKDPSLSEAXXXXXXXQVAVNADGRRDGIADKKLRGGXXXXXXXXXXXXXEVAVHESDGHGSNXXXXXXXXXXXXXXXXXXXXXXXVFLLQNNPFNPGSEHDYFLQQLHRIQEQVIDEAAAEQAAAKQGCEQHQDCEQXXXXXXXXXXRVFLLRDRDSLYSSMSCYRIDRSIHFHEPVKLVEGKMLWHLV 629          
BLAST of mRNA_Ecto-sp6_S_contig103.908.1 vs. uniprot
Match: A0A6H5JFC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC3_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 2.120e-32
Identity = 99/269 (36.80%), Postives = 134/269 (49.81%), Query Frame = 1
Query:  409 LEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKHEMVHSDLDFSTGNLETRFYWAPFCFGPESVGAKLATVMDGVQTA--KRGDKRSVIITAFGVHDSYEL-----PLLVKGSASTSYMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAWADPTAEK------GQLSKAVHASPNTTTRSTTETNG--VSFSFGAPGTTAATDPTPPLVFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAGEGNEDAEGGIYLVDD 1170
            LED++S++ FHF+GDST RRL ESFVSI TGQ S H +VH  +D S+G+L+  F+WAP C    S   K+   +D +  A  + GD R++IITAFGVH+++ L       L + +A +S+      D         A L  C+  T+QLV  A       A    EK        L  A    P       T T G  VS S    G        PPLVFL+QNN Y P S ED +LE L  +Q   V++            G++++DD
Sbjct:   79 LEDLSSRYVFHFVGDSTTRRLAESFVSILTGQASPHFVVHERIDMSSGSLKVIFHWAPMCIDARS---KIQASIDEIVAAQLRNGDARAIIITAFGVHNAHRLYGDQAGTLPRYTAPSSH------DTFREEDAEAAALNVCEEVTSQLVHVANLTAGRSASANQEKLYSPGHRGLDVADEGDPKFGRPRGTWTGGGDVSLSIDDEG-------LPPLVFLLQNNHYFPGSEEDRFLEHLHDVQDRVVRQGAKDIARHGENAGVFVLDD 331          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G0T6_ECTSI5.790e-31697.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L6U4_9PHAE2.600e-13050.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0V6_ECTSI8.770e-10044.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZD7_ECTSI3.020e-5436.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGU9_9PHAE4.400e-4933.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUL3_ECTSI3.210e-4333.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFC3_9PHAE2.120e-3236.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig103contigEcto-sp6_S_contig103:268340..273939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1317
Hectar predicted targeting categorysignal peptide
Exons3
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-23_001550.1
Cds size1317
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348741.8826146-CDS-Ecto-sp6_S_contig103:268339..2690951682348741.8826146-CDS-Ecto-sp6_S_contig103:268339..269095Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig103 268340..269095 -
1682348741.8923962-CDS-Ecto-sp6_S_contig103:269867..2700411682348741.8923962-CDS-Ecto-sp6_S_contig103:269867..270041Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig103 269868..270041 -
1682348741.9013433-CDS-Ecto-sp6_S_contig103:273552..2739391682348741.9013433-CDS-Ecto-sp6_S_contig103:273552..273939Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig103 273553..273939 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig103.908.1prot_Ecto-sp6_S_contig103.908.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig103 268340..273939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig103.908.1

>prot_Ecto-sp6_S_contig103.908.1 ID=prot_Ecto-sp6_S_contig103.908.1|Name=mRNA_Ecto-sp6_S_contig103.908.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=439bp
MRLSRLPLIFGVLTGSILVCFPSAVPAESTQPDHLTLDWSEWIDPPVAPV
TDNWATSSMEALLTTPCVDAAQTGGCHQLRPAQVRTLVHDCARRLKVAGD
LCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIG
DSTIRRLGESFVSIFTGQGSKHEMVHSDLDFSTGNLETRFYWAPFCFGPE
SVGAKLATVMDGVQTAKRGDKRSVIITAFGVHDSYELPLLVKGSASTSYM
DALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAWADPTAEKGQLS
KAVHASPNTTTRSTTETNGVSFSFGAPGTTAATDPTPPLVFLMQNNRYPP
NSPEDNYLEELRRIQRGEVQEWEAGEGNEDAEGGIYLVDDSVSLFRNLSC
YRESNPIHFHEPVKLVEGKMLWDLLALVERESASPLVP*
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mRNA from alignment at Ecto-sp6_S_contig103:268340..273939-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig103.908.1 ID=mRNA_Ecto-sp6_S_contig103.908.1|Name=mRNA_Ecto-sp6_S_contig103.908.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5600bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:268340..273939- (Ectocarpus species6 EcLAC_371)
ATGCGGCTGTCTCGACTACCTCTCATCTTTGGAGTTTTGACCGGATCGAT TCTGGTATGCTTTCCGAGCGCGGTTCCCGCAGAGTCTACCCAGCCCGACC ACCTGACGCTAGACTGGAGTGAGTGGATCGACCCACCAGTGGCGCCTGTG ACGGACAACTGGGCCACCAGCAGCATGGAAGCACTGTTGACCACGCCCTG CGTGGATGCTGCACAGACGGGTGGATGCCATCAACTTCGGCCAGCACAAG TGCGGACGCTGGTGCACGATTGTGCCCGCCGGTTGAAGGTCGCGGGCGAT CTCTGTGGGCATTCCGAGACTCCCGTCGTCGAGGATGACTATCGGCTTCC TCACATGGAGTCGGGAGTGCTTCCTTGTGGATTTGAGGTGAGCGTTCGGT TTTGTATGTACACAGCAGTACTTCATGTGCAGATTTCAACAAAAAAAATC ACTGCGAGAATCAGCAGGAACTCAACAGCACTGCTGTGGAGGGCCAGGCG CAATCCAGCTTGTTAAGGGTGCTCTAGACGATGGCTGCTGCCATGCTGAC TCATCGGAGAGCTGTCGCTGCGGCTCTCTGTATAGGAGCGCCAACCCCTC GCATGTTTTTTCATACCACGTGGACTAAGTTCTGCTGTGTAGCATACAAG TAAGATTTTTTTTTTCGCGCAAACTTCCTGCAGCGGCTACCCACCAGTTG ACTACATACAGCAGCAGTGCAGCAGATTTACAAATCGGTCAGCGACGACG AGGCAGGGGAGAGACCCACGTTGAGTGCTACTTTGTGTAAAAAGTCTCCG TCCATGCGTAGATAGGGATACATGTACACACACACACAAACACACAAACT ATCGTATAGAATCCTTGACGGAATTTCCTACAACGGATTCTTACTCTTGC TCACATTGATTGATATTTTTCTCAGCACACACAGACCCCACAGCAGTCAC CACTAGCTTCAAAGACGCCTGCAGGTGTGGTGCGTACAGCCCCCAAGTTC TGGTGACGATCCAACCATCATGGAGGGAGAACTCTGTGGTGATGTGGTGA GAGGTCTGTCTCTTGGTCGAATCCGTGGCAAATCAGGGGGGGGAATGCCA GCCAAAAAATATCCGTCGGGCCAACTTTCAGTTGCGCCATACAGTAGAAG AGACTCGTGTAGCTCTTTTTTTTTTTCGTCTTCACATCAAATCAGCGCTC ACAGCACTAAATAGTGCCGTCTACGTCAACCCGTGATCACACAGAAGAGC CCCTCTCTACGCTCCCCTCCTGCGGTACGTTGCCTATGGTGTTTAATGCG AGAAGAGTTCAGCACTCTCTTCCCTCTGTGTGCGAACTAGCGCTATCCAC AAGGTCAGCAGCGGAAGCGAGAGAACAAAATTCACTTTGCAAGAAAAGCT CGCTCACGCCGGGATTCGAACCCCTGACCTGACCTCCAGAAGATGCCGAG GATGCCAACTAGACCACCGGGCGGGGCGTCCGAGTTTACGAACTCAATAG TCCACAAGAATAGGGAGCCCGTGGTCGAAAAACCCGGCACGGGTATCAAT GCACGTACTCTTCTTCTTGCGCTGTGGACTCGCGTATGTATCTGTTTTCG TCGAAAATCTGCATCATGTCCTTAAGACTATCTTGTCTGAATCACTATTT GTTGGAGGTGATTTTCTTGTGCTCGCCCCGGTGCTCTAGTGGTATCCTCG AAAACCGCTAAATAGTGGCTAAGGTCGTGAGTTCGAATCTCCATGGGGTG AAAAAAATTACAGTTGCGGGTAAGAGCGAAACATTGCTAAAAAGGCTCTC GAAGTTAGCACCGTTGATGAGGGAAACGGACCACTGGACCCTTCTCGCGA AAAAGAAATCAGCACGCACCGCAGGAGGAAGGTGGGGTACGACAGTAAAT AAGAACAGAGACCCTCTTCTCACGTGTGACCCTGGTTGCAAGACCCTGGA TGGTTGTACAGTACATCGATAGTTGTACGAAAAAATGAAATACACTGAAA CTGTAGTACACGTCTATCTCACCACGAAAAATGACGCGACTACTGCCTTC ACCGTAATGAACAGGACGAATACACATACACACACACCATTTGAAGCACG TGTGTTTTCGACAAATTGAGAACTCCGACGTCGCTACTTGCAAGCCTTGG GCGATGTCGATAACGTATGTATTTTGATGTAGTACTAAGACATATGCTGT AGAGGCACCGTTTGTGTACTGCCTGTATTTTCACCGGCATTATTCCAGTA CAGGATGACGAATGACTTGGTTATTCCGTCTGTGCACGCAACAAAAAACA CCGCGACTTTTCCGGGCACCGGCCCCACTATAGTCGGATGAAGGCTATCG GCGCCAGGTATGCGGCCTTTTTTTTCATGCAAACGCTGAGCGCGATTCAA CGGTACAACGTAGGGGCACACGTGCTGTGGGAGCTCGGGATTGAGGTCGT TGTAGGACTAGCGTTAGGCAAGCCGTACGAAAGTGGCACGTGTCTTGCTC TGCAACTGCTCCCACCTGATATCTGTGTCAACCCCCCCACACATGCCTTA TGCAAATAGCGCAAAATCTGCTGTGGAGTTTACAGCTAGCCACAACCCCT CAAGGGGAGTACTACACCACATACTATCATCGTGTTGGACATCGGTTCAA TCAATCGATACGAACGATATCGATACTGCGAAGCGAGCAGGCGAACACAG TGAGAGGACGCGCGATTGCGCGGAAGTTCGCCGTGCGAGCCCAAGCGCCC CCCCCCCCAAGCTGATTGAGGAGCACCACAGGAGGCCACACCGGAGGCCC GCCATTTGGACCTATTTTGCTCCATTTCCCATCACCATTGCCGAAAAGTT GGCCTCAGCAACAGGCTGTGAAAAGCCAACTGGTTGAACAAACGCGTGTG GGTGAACACATGATATCGGAAAATGCAGCATGTGGTCCATCATTCATTCT TTTTACCGTAAAATAGGCTACTTTCCTTCAAAGCTCAGTGGTATCGCAGA TCATCAACAAAGATATTAAGTTTGTCATCATCATTCGTCATTGTCATCAG CAAGTATATAAAGTTTGTCGAACAGTGTGTAGAAAGCCAAGCTCGCACAA TGAATTTACCCAAAAACCAATACTTGCGGGCTATTGCATTGGGTCTATAT AAACAGACGATTCGCACAGAGAAAGGATAGTCCTCTCGATGTCGGCTTAG GCTTGCGTTTTGATGTCGACCATGCCCAACGCTTCCTCCACGTCATCAGC ACATGCGGCAGACGCAGTTGCCCCCCCGGACGAAGCGCTTATGCAATCCC AGCAACCCCAGCACTGCAGCCCACAGCTTCGAAGCGTGCAGCGTGGGGTT TGTGTGTTTTATTTTATTTGCATCGACCGCTAACCTGCTGACCGATGAAA ATACGTCAGTCTCAGCGCGACTGAAAGCACAAATACAGTATTTGTGTATG CTTGGGTTTGATACCTTTCGATTCTCATCTGCTGCTGCGATGTGGTGCCA TGGAACGATACGAAAGACTAGGTCACGTGTGAACGTCTACAACAGTAGTA GTCTGAATTTTTATGGGACAACAACAAATTCTTGGCCATATCTTGTCGAG GCACAACATACGTGGAGGCAAAACATACGTGGTACGGCATGGCTCCGCCC GCACTCAACGACGAAGTTGACCTTCACAATTCTGTAAAGTATTGGCAAAT ACTTCGTGAAGTATTGGCAAATATTACCAAGTGGCTCTTGCCAAAGTCTT CCTCTCTTGCGAGGGTACGTGGTGCTACTATAGAATTTAGCCATTTCCTT TTTCCTGGACAGGGAAACGTGAACACAATCTCCCTTCTTGTTTCTGAAAG CTTCAACAACCCGTTGCCGTGTGTATCTTTCCGTTGCGGTATCACTAGGA GCGTACGCCGAACGAAGTCTTGGAGGACATGGCCTCCAAGTTCACCTTCC ATTTCATTGGCGACAGTACCATCCGCAGACTCGGGGAGAGCTTCGTGTCA ATATTCACGGGACAAGGATCAAAACATGAGATGGTTCACAGCGACTTGGA CTTCTCTACAGGGAACCTAGAGGTGCGCAAGTTGCTCCCATGAAGGTACA AGCAGCTAGAGATGACACGCTTTCATTCCGATCACCGTTCTAGCTATTGT TAGCTCGCCTGCGCACCGCCGTGAATTGCTGTCGTATCTCTTATTAACTG ATTGGAGACTGCGGTTTTGAAGTCGGGCACCCTTCTCATGATGCGGTTGA AACTCACTTATATTGCGTGGTATCTCCGACCTTTCTCCGACGCTGCCGAG CGCGTCTTCCGTGAAGCACTACGGGAAGAAGCTCCCAACCCCTCGGTGAT GGAACCATTGAAACGTTAAAACGTCAAGACGCGCACAATATCTCTTTGGG TCCCTCCCACACTTGCGACCGAACGTCTTCTGTAGAGCCCACAAGGCCGT ACGTTAGGCAGGATATATGCCGCGCAGGCAACGAAATATACGAGTATTAA GAATGGTGGTGCAAGGCTGTTTCGCCTCTAAACTGATATAGGCGTTTAGG CTATTATTACCTAGCCGAGGGTTGTTCAAGGCATGTATTGTTTGTTCGAC GATCACTTTCGGTTGGGCATTGCTGCTCCATTTCCTTGGAGCAAACTGTG CCCGGCGAGCGTATGTCGGCGAGCGTTGTATATCCCGCCGCCTAGGGTGA TGTGATGAAACCGGACTAAAGGGAAGGTCCGAGTCGACACACGGGGCTGT CCTCGGTATCTTATACTGCACGACTCAGACATCGTCAAACCTAGGTTGAC TAACGAAATGTCTGGCGCGTTTCCCGGACTTCCTAAAAACCCAGACTCGC TTTTACTGGGCACCCTTCTGTTTCGGGCCTGAGAGTGTTGGCGCGAAACT GGCGACCGTCATGGACGGAGTGCAAACTGCGAAGCGGGGCGACAAGCGCT CAGTTATCATCACAGCATTTGGAGTCCACGACTCGTATGAGCTACCGCTG CTCGTCAAGGGGAGTGCGAGCACCTCGTACATGGACGCCCTCCCTCCAGA CTTCGTTGACAATGGCAGTGTGAGGACCGCCACCCTTGGCGCTTGTCAGG CCACCACCGCCCAGCTTGTACAAGCAGCTGCTGCGAAGGTGATGGCATGG GCCGACCCGACCGCGGAGAAGGGGCAATTGTCGAAGGCGGTGCACGCCTC GCCGAACACTACCACCAGGAGTACGACGGAAACGAACGGGGTTTCGTTTT CATTCGGAGCGCCTGGGACAACAGCGGCAACGGACCCCACACCCCCGCTG GTCTTTCTCATGCAAAACAACAGATACCCTCCAAACTCTCCGGAAGATAA CTACCTGGAAGAGCTCCGTCGAATACAGCGAGGAGAGGTTCAGGAGTGGG AGGCAGGCGAGGGCAATGAGGACGCTGAGGGAGGCATATATCTTGTGGAC GACAGCGTTAGTCTCTTCCGCAACCTATCATGCTACCGCGAAAGCAACCC TATCCACTTCCATGAGCCCGTGAAACTCGTGGAAGGAAAGATGCTTTGGG ACCTGCTTGCACTCGTCGAGCGCGAGAGCGCATCGCCTCTCGTCCCCTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:268340..273939-

>mRNA_Ecto-sp6_S_contig103.908.1 ID=mRNA_Ecto-sp6_S_contig103.908.1|Name=mRNA_Ecto-sp6_S_contig103.908.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1317bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:268340..273939- (Ectocarpus species6 EcLAC_371)
ATGCGGCTGTCTCGACTACCTCTCATCTTTGGAGTTTTGACCGGATCGAT
TCTGGTATGCTTTCCGAGCGCGGTTCCCGCAGAGTCTACCCAGCCCGACC
ACCTGACGCTAGACTGGAGTGAGTGGATCGACCCACCAGTGGCGCCTGTG
ACGGACAACTGGGCCACCAGCAGCATGGAAGCACTGTTGACCACGCCCTG
CGTGGATGCTGCACAGACGGGTGGATGCCATCAACTTCGGCCAGCACAAG
TGCGGACGCTGGTGCACGATTGTGCCCGCCGGTTGAAGGTCGCGGGCGAT
CTCTGTGGGCATTCCGAGACTCCCGTCGTCGAGGATGACTATCGGCTTCC
TCACATGGAGTCGGGAGTGCTTCCTTGTGGATTTGAGGAGCGTACGCCGA
ACGAAGTCTTGGAGGACATGGCCTCCAAGTTCACCTTCCATTTCATTGGC
GACAGTACCATCCGCAGACTCGGGGAGAGCTTCGTGTCAATATTCACGGG
ACAAGGATCAAAACATGAGATGGTTCACAGCGACTTGGACTTCTCTACAG
GGAACCTAGAGACTCGCTTTTACTGGGCACCCTTCTGTTTCGGGCCTGAG
AGTGTTGGCGCGAAACTGGCGACCGTCATGGACGGAGTGCAAACTGCGAA
GCGGGGCGACAAGCGCTCAGTTATCATCACAGCATTTGGAGTCCACGACT
CGTATGAGCTACCGCTGCTCGTCAAGGGGAGTGCGAGCACCTCGTACATG
GACGCCCTCCCTCCAGACTTCGTTGACAATGGCAGTGTGAGGACCGCCAC
CCTTGGCGCTTGTCAGGCCACCACCGCCCAGCTTGTACAAGCAGCTGCTG
CGAAGGTGATGGCATGGGCCGACCCGACCGCGGAGAAGGGGCAATTGTCG
AAGGCGGTGCACGCCTCGCCGAACACTACCACCAGGAGTACGACGGAAAC
GAACGGGGTTTCGTTTTCATTCGGAGCGCCTGGGACAACAGCGGCAACGG
ACCCCACACCCCCGCTGGTCTTTCTCATGCAAAACAACAGATACCCTCCA
AACTCTCCGGAAGATAACTACCTGGAAGAGCTCCGTCGAATACAGCGAGG
AGAGGTTCAGGAGTGGGAGGCAGGCGAGGGCAATGAGGACGCTGAGGGAG
GCATATATCTTGTGGACGACAGCGTTAGTCTCTTCCGCAACCTATCATGC
TACCGCGAAAGCAACCCTATCCACTTCCATGAGCCCGTGAAACTCGTGGA
AGGAAAGATGCTTTGGGACCTGCTTGCACTCGTCGAGCGCGAGAGCGCAT
CGCCTCTCGTCCCCTGA
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