mRNA_Ecto-sp6_S_contig103.899.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: D7FXU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU8_ECTSI) HSP 1 Score: 352 bits (903), Expect = 2.380e-122 Identity = 177/190 (93.16%), Postives = 181/190 (95.26%), Query Frame = 1 Query: 1 MVYATCIDGSVVHTTVTGTPPGDLEDRTIDPVSLTRRTLLDANPRCISKVEGLRAEIMEEREEAEKAAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPLAQVVPTTICFCDKYPDV 570 MVYAT IDGSVVH T TGTPPGDLEDRTIDPVSLTRRTLL+A PRC+SKVEGLRAEIMEEREEAEK AVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTN GDLEVSVDG +VLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGG+Y WGIQAREPLAQVVPTTICF DKYPDV Sbjct: 1 MVYATSIDGSVVHATATGTPPGDLEDRTIDPVSLTRRTLLEAIPRCMSKVEGLRAEIMEEREEAEKEAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNTGDLEVSVDGFLVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGEYAWGIQAREPLAQVVPTTICFSDKYPDV 190
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: D7FMM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM4_ECTSI) HSP 1 Score: 333 bits (853), Expect = 2.850e-110 Identity = 167/190 (87.89%), Postives = 175/190 (92.11%), Query Frame = 1 Query: 1 MVYATCIDGSVVHTTVTGTPPGDLEDRTIDPVSLTRRTLLDANPRCISKVEGLRAEIMEEREEAEKAAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPLAQVVPTTICFCDKYPDV 570 MVYAT IDGSVVH T TGTPPGDLEDR+IDPVS TRRTLL+ANP+ +S VEGLRAEI+ E EEAEKAAVEG+GL +SKMVTVLGFLPFGKHGFRRRRARE AAAHLGEA LSVTNKGDLEVSVDGSIVLRKSGPSWFGFR+KDSTYEVRVTEDGV VSRGGKYDWGIQAREPLAQVVP T CFCD YPDV Sbjct: 313 MVYATSIDGSVVHATATGTPPGDLEDRSIDPVSQTRRTLLEANPQRMSIVEGLRAEIVAETEEAEKAAVEGQGLKRSKMVTVLGFLPFGKHGFRRRRARERAAAHLGEAALSVTNKGDLEVSVDGSIVLRKSGPSWFGFRKKDSTYEVRVTEDGVVVSRGGKYDWGIQAREPLAQVVPATTCFCDMYPDV 502
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: D7G0T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T0_ECTSI) HSP 1 Score: 256 bits (653), Expect = 4.200e-85 Identity = 126/133 (94.74%), Postives = 129/133 (96.99%), Query Frame = 1 Query: 172 MEEREEAEKAAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPLAQVVPTTICFCDKYPDV 570 M+ER+EAEK AVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREH AAHLGEATLSVTNKGDLEVSVDGSIVLRKS PSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPLAQVVPTTICF DKYP+V Sbjct: 1 MDERDEAEKEAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHVAAHLGEATLSVTNKGDLEVSVDGSIVLRKSRPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPLAQVVPTTICFFDKYPNV 133
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: A0A6H5JQZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ9_9PHAE) HSP 1 Score: 259 bits (661), Expect = 8.990e-84 Identity = 137/171 (80.12%), Postives = 146/171 (85.38%), Query Frame = 1 Query: 1 MVYATCIDGSVVHTTVTGTPPGDLEDRTIDPVSLTRRTLLDANPRCISKVEGLRAEIMEEREEAEKAAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQARE 513 MVYAT ID VV T TGTPPGDLEDRT+DP S TRRTLL+AN + +S VEGL+AEIM E EAEK VEGRGL KSKMV VLGFLPFGKHGFRRRR REHAAAHLGEATLSVTNKGDLEVSVDGSIVL KSGPSWFGFR+KD TYEVRVTE V VS+GG +DWGIQAR+ Sbjct: 140 MVYATSIDCFVVRATATGTPPGDLEDRTVDPASQTRRTLLEANTQRMSIVEGLQAEIMAETAEAEKETVEGRGLKKSKMVAVLGFLPFGKHGFRRRRPREHAAAHLGEATLSVTNKGDLEVSVDGSIVLGKSGPSWFGFRKKDFTYEVRVTEGVVMVSQGG-HDWGIQARK 309
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: A0A6H5K6E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E6_9PHAE) HSP 1 Score: 255 bits (651), Expect = 3.740e-81 Identity = 137/190 (72.11%), Postives = 145/190 (76.32%), Query Frame = 1 Query: 1 MVYATCIDGSVVHTTVTGTPPGDLEDRTIDPVSLTRRTLLDANPRCISKVEGLRAEIMEEREEAEKAAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPLAQVVPTTICFCDKYPDV 570 MVYAT IDGSVVH T TG P GDLEDRTI+ VS T VE A+EGR L KS MVTVLGFLPFGKHGFRRR AR+HAAAH+GEATLSVTN+GDLEVSVDG IVLRK GPSWFGFRQK STYEVRVT+DGVAVS+GGKYD GIQAREPLAQVVPTTICFCDKYPD+ Sbjct: 227 MVYATSIDGSVVHATATGRPSGDLEDRTIETVSPTH-------------VE----------------AIEGRILKKSNMVTVLGFLPFGKHGFRRRPARKHAAAHIGEATLSVTNEGDLEVSVDGFIVLRKPGPSWFGFRQKYSTYEVRVTKDGVAVSQGGKYDLGIQAREPLAQVVPTTICFCDKYPDL 387
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: A0A6H5LDV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDV1_9PHAE) HSP 1 Score: 193 bits (490), Expect = 1.450e-59 Identity = 100/174 (57.47%), Postives = 126/174 (72.41%), Query Frame = 1 Query: 1 MVYATCIDGSVVHTTVTGTPPGDLEDRTIDPVSLTRRTLLDANPRCISKVEGLRAEIMEEREEAEKAAVEGRGLTKS-KMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPL 519 M+YA+ IDGSV+H T G P D +D V + LL AN R + GLR+EI E E KAA+EGR L K K+ T++GFLPFGK+GFR RRAREHA AH+GEATLS+T KG+LEV+VDG VLRKSGPSWFGFR+ DS+YE+R TE+G+ +SR GK+DW ++A + L Sbjct: 12 MLYASPIDGSVIHATANGKAPHDKDDDMTGQVPHGKHVLLKANSRKMLNALGLRSEIFEANLEKRKAALEGRELPKEGKVDTLMGFLPFGKNGFRGRRAREHAEAHMGEATLSLTKKGNLEVAVDGMTVLRKSGPSWFGFRKSDSSYELRATEEGIVISRQGKFDWSVKAGDIL 185
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: D7G9B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B0_ECTSI) HSP 1 Score: 197 bits (502), Expect = 8.830e-58 Identity = 97/152 (63.82%), Postives = 119/152 (78.29%), Query Frame = 1 Query: 61 PGDLEDRTIDPVSLTRRTLLDANPRCISKVEGLRAEIMEEREEAEKAAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREP 516 P D + T PV RTLL ANPR +SKV LR+E + R E ++AA+EGR L + K+ T++GFLPFGKHGF RRRAREHA AH+GEATLS+T KG LEVSVDG +VLRKSGPSWFGFR+ D +YE+RVTE+GV +SR G YDWGI+A++P Sbjct: 339 PRDADGNTTGPVPQKNRTLLTANPRKMSKVRALRSENIAARLEKKRAALEGRTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHMGEATLSITKKGGLEVSVDGIVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYDWGIKAQDP 490
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: A0A6H5L4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D4_9PHAE) HSP 1 Score: 193 bits (490), Expect = 1.110e-56 Identity = 98/172 (56.98%), Postives = 124/172 (72.09%), Query Frame = 1 Query: 1 MVYATCIDGSVVHTTVTGTPPGDLEDRTIDPVSLTRRTLLDANPRCISKVEGLRAEIMEEREEAEKAAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREP 516 M YA+ DGSV+ T G P D + T PV+ RTLL ANPR +SKV LR+E + E ++ A EGR L + K+ T++GF+PFGKHGF RRRAREH A++GEATLS+TNKG L VSVDG +VLRKSGP FGFR+ D +YE+RVTE GV +SR G YDWG++A++P Sbjct: 249 MAYASPTDGSVILATAIGNAPRDADGNTTGPVTQNNRTLLTANPRKMSKVRALRSENIVAGLEKKRVAREGRTLREGKLATLMGFMPFGKHGFLRRRAREHVEAYMGEATLSITNKGGLGVSVDGIVVLRKSGPYCFGFRRTDRSYELRVTEAGVVISRRGMYDWGLKAQDP 420
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: D7FTM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM0_ECTSI) HSP 1 Score: 178 bits (452), Expect = 5.780e-54 Identity = 96/171 (56.14%), Postives = 119/171 (69.59%), Query Frame = 1 Query: 1 MVYATCIDGSVVHTTVTGTPPGDLEDRTIDPVSLTRRTLLDANPRCISKVEGLRAEIMEEREEAEKAAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQARE 513 MVYA DGSVV T TG P D E R + R TLL AN R ++K E R+EI+ R + A EGR L KSKM T +GFLPFGK GF RRAR+ A AHLGEATL +T+KG LEVSVDG++VLRK GPS+FGFR+ D +YE++VTE+G+ VSR G + WG++A + Sbjct: 1 MVYAAPADGSVVFATSTGRVPRDEEGRATGSLPQKRLTLLAANERLMAKAEDFRSEIILRRLVKKNALREGRTLKKSKMSTFMGFLPFGKRGFLHRRARDRAEAHLGEATLKLTSKGILEVSVDGTVVLRKKGPSYFGFRRTDPSYELQVTEEGIEVSRRGDFVWGVKAED 171
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Match: D7G9A5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A5_ECTSI) HSP 1 Score: 176 bits (447), Expect = 7.430e-54 Identity = 84/126 (66.67%), Postives = 106/126 (84.13%), Query Frame = 1 Query: 139 ISKVEGLRAEIMEEREEAEKAAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNKGDLEVSVDGSIVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREP 516 +SKV LR+E + R E +KAA+EG+ L + K+ T++GFLPFGKHGF RRRAREHA AH+GEATLS+T KG LEVSVDG++VLRKSGPSWFGFR+ D +YE+RVTE+GV +SR G YDWGI+A++P Sbjct: 1 MSKVRALRSENIAARLEKKKAALEGQTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHVGEATLSITKKGGLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVDISRRGMYDWGIKAQDP 126 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.899.1 >prot_Ecto-sp6_S_contig103.899.1 ID=prot_Ecto-sp6_S_contig103.899.1|Name=mRNA_Ecto-sp6_S_contig103.899.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=191bp MVYATCIDGSVVHTTVTGTPPGDLEDRTIDPVSLTRRTLLDANPRCISKVback to top mRNA from alignment at Ecto-sp6_S_contig103:194408..195245- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig103.899.1 ID=mRNA_Ecto-sp6_S_contig103.899.1|Name=mRNA_Ecto-sp6_S_contig103.899.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=838bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:194408..195245- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:194408..195245- >mRNA_Ecto-sp6_S_contig103.899.1 ID=mRNA_Ecto-sp6_S_contig103.899.1|Name=mRNA_Ecto-sp6_S_contig103.899.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:194408..195245- (Ectocarpus species6 EcLAC_371)back to top |