Homology
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Match:
D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI)
HSP 1 Score: 208 bits (530), Expect = 1.740e-54
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 2
Query: 2 VDPVMPGAAAGFTAPAAAPAFNASEDEVKGESGPGVGGGGNILVGNSVEAASSEASRDSGDGLVPMTEWPIAKRAVGGMERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWMLCQAVAD 367
VDPVMPGAAAGFTAPAAAPAF+ASEDEVKGESGPGVGGGGNILVGN+ +AASSEASRDSGDGLVPMTEWPIAKRAVGG+ERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWML ++
Sbjct: 1704 VDPVMPGAAAGFTAPAAAPAFDASEDEVKGESGPGVGGGGNILVGNNAKAASSEASRDSGDGLVPMTEWPIAKRAVGGLERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWMLVSSLTQ 1825
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Match:
D7FMR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR4_ECTSI)
HSP 1 Score: 184 bits (467), Expect = 1.380e-51
Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 2
Query: 356 AVADRKPKLRSRRAGYFRKFCSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDGSESDPCHVSLVGKGAILPGALRALEEG 649
AVADRKPKLRSRRAGYFRK CSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDGSESDPCHVSLVGKGAILPGALRA + G
Sbjct: 21 AVADRKPKLRSRRAGYFRKLCSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDGSESDPCHVSLVGKGAILPGALRARKGG 118
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Match:
A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)
HSP 1 Score: 75.5 bits (184), Expect = 1.530e-10
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2
Query: 230 GGMERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWMLCQAVADRKP---------KLRSRRAGYFRKFCSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDGSESDPCHVSLVGKGAILPGALRALEEG 649
G ++RLLFA TMG VA+ L+++LW +S+P +A RIV W+L + V P +LR ++ G FR F +G + V L A+ L V + GS +LW RG+ VFEW + ++G VS K P A+ E G
Sbjct: 1376 GMLQRLLFASTMGLVAVTLNALLWVLSLPWVAWRIVCWVLYKVVETGDPDEVETFLSVRLRDKK-GKFRAFLWVFLGIIACVFALGFAVALCGVCVAGSFVLWLRGVCNVFEWAHWRLSEEGR-----FVSGETKKGTCPTAMPGQERG 1518
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Match:
D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI)
HSP 1 Score: 63.2 bits (152), Expect = 7.510e-7
Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 2
Query: 170 RDSGDGLVPMTEWPIAKRAVGGMERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWMLCQAV------ADRKPKLRSRRAGYFRKFCSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDG 568
R G+G VP+T G ++RL F LTMG VA+AL+S+LW +S+P +A R+V W+ + D + +R G R+ + + L A L ++GS LWFRG++ V+EW+ ++G
Sbjct: 183 RQEGEGFVPITATYGWHTFDGTLQRLFFVLTMGLVAVALNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEETNAPVKR-GKLRESLLALGTIAACWLALLFAAALCGACIVGSFFLWFRGVWNVWEWVRWRRSEEG 320
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 1.74e-54 / Id = 90.98 Expect = 1.38e-51 / Id = 95.92 Expect = 1.53e-10 / Id = 36.24 Expect = 7.51e-7 / Id = 32.37 Sequence D7FMR2_ECTSI D7FMR4_ECTSI A0A6H5JB40_9PHAE D7FNX2_ECTSI
Match Name E-value Identity Description
D7FMR2_ECTSI 1.740e-54 90.98 Ion_trans domain-containing protein n=1 Tax=Ectoca... [more] D7FMR4_ECTSI 1.380e-51 95.92 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5JB40_9PHAE 1.530e-10 36.24 Ion_trans domain-containing protein n=1 Tax=Ectoca... [more] D7FNX2_ECTSI 7.510e-7 32.37 Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 203.8 Seed ortholog evalue 8.9e-50 Seed eggNOG ortholog 2880.D7FMR2 Model size 1543 Hectar predicted targeting category other localisation Exons 5 EggNOG free text desc. store-operated calcium channel activity EggNOG OGs KOG3609@1,KOG3609@2759 Cds size 690 COG Functional cat. U Best tax level Eukaryota Best eggNOG OG NA|NA|NA
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348739.7752075-UTR-Ecto-sp6_S_contig103:16549..16562 1682348739.7752075-UTR-Ecto-sp6_S_contig103:16549..16562 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig103 16550..16562 + 1682348739.8280857-UTR-Ecto-sp6_S_contig103:20668..21508 1682348739.8280857-UTR-Ecto-sp6_S_contig103:20668..21508 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig103 20669..21508 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348739.7850523-CDS-Ecto-sp6_S_contig103:16562..16898 1682348739.7850523-CDS-Ecto-sp6_S_contig103:16562..16898 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 16563..16898 + 1682348739.7934058-CDS-Ecto-sp6_S_contig103:17603..17816 1682348739.7934058-CDS-Ecto-sp6_S_contig103:17603..17816 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 17604..17816 + 1682348739.8017423-CDS-Ecto-sp6_S_contig103:18421..18497 1682348739.8017423-CDS-Ecto-sp6_S_contig103:18421..18497 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 18422..18497 + 1682348739.8101695-CDS-Ecto-sp6_S_contig103:20360..20423 1682348739.8101695-CDS-Ecto-sp6_S_contig103:20360..20423 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 20361..20423 + 1682348739.8193874-CDS-Ecto-sp6_S_contig103:20666..20668 1682348739.8193874-CDS-Ecto-sp6_S_contig103:20666..20668 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 20667..20668 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.879.1
>prot_Ecto-sp6_S_contig103.879.1 ID=prot_Ecto-sp6_S_contig103.879.1|Name=mRNA_Ecto-sp6_S_contig103.879.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=230bp
MPGAAAGFTAPAAAPAFNASEDEVKGESGPGVGGGGNILVGNSVEAASSE back to top mRNA from alignment at Ecto-sp6_S_contig103:16550..21508+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig103.879.1 ID=mRNA_Ecto-sp6_S_contig103.879.1|Name=mRNA_Ecto-sp6_S_contig103.879.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4959bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:16550..21508+ (Ectocarpus species6 EcLAC_371)TGTCGATCCTGTT ATGCCCGGCGCTGCTGCGGGTTTCACCGCCCCGGCTG
CTGCGCCTGCCTTCAACGCTTCGGAAGACGAAGTGAAGGGAGAGAGTGGT
CCTGGTGTTGGCGGTGGCGGCAATATACTTGTCGGCAACAGTGTTGAAGC
TGCTTCCTCAGAAGCATCACGTGACAGCGGCGACGGGTTGGTGCCCATGA
CGGAATGGCCGATCGCTAAGCGAGCGGTGGGGGGCATGGAGAGGCTGCTG
TTCGCGCTCACCATGGGCCCCGTCGCTTTGGCCCTGAGCTCCGTCCTGTG
GGCGATCTCGATCCCGTCACTGGCGGGGCGTATAGTGCGGTGGATGCTG G
TGAGCTCACTGACGCAGTTAGCTGTCCTATCGATACGCGAACCACAACGC
GGTTCCTGCCGTTCGTCTTGGGTTAGCGACCAGGCTGATAGTCTTTGGCG
GCGAAGATTGGTCCTGGCCTAGGACTGCAGTGCAAAATTGACTTCGTGTA
TAAGTGTTGATCATCGAGGCTCGTTGTCGTTATTTTTCTGCGCAGCCGGA
GGCGAAGATCTAGCAGCAAGGGACGTTCATGTATGATGTCAAACGGACAT
GAAATTAGTTGTTACTCGCAACCGAGACGGCGCCGACAACATGCAAGCCA
CCGACAGTTACCTGCGACGACGACTAAATTTGGAACAATGAGGTTCTTGT
GAGGTTTTCTTTTTAAACCTCGTGGTCTTCTCGAAGACATTCGAGCCCCC
CTCTTTTTTATCAAGTCCCAGTCTGCCCCCCAAGCGTATCATTCCTGCAA
TACCTTGCCCTTTTACCTTTCACTTGTCACCCCCAAGGCCTCCACCCCCA
CCCCACCCCCCCTTCTTTTCTGGTCCCCCTCCCACCGCCCTTGTTCTACA
TTTTCCTGAGACGTTATGGTGGCGCCGGTCGAAACACCGCAACCTCCACC
GCCCTCTGCCCCCTCTGACCCGCTAGCACGTCAAATCTCAACCTAAAGGC
CGATCAAAACGCAGGGGTGTTGCGCCGCCATGACCCCCCTCTGTGACCAA
TTAGTGCCAGGCGGTAGCAGACAGGAAGCCGAAGCTGCGATCGCGACGAG
CCGGATACTTCCGCAAGTTTTGCTCCGGAATAGTCGGGCCGCTTGGTTTA
GTAGTCGGTTTGTCCTTGGCCTTGGTCCTCGTCGTGGTCTCCCTGCTTGG
CTCCGTCCTTCTCTGGTTCCGGGGCTTGTACGAGGTGTTTGAGTGGCTTA
CACAGCCCATTGAGCAG GTCAGAAGAACGAAACAAGTGCCGCAGTTGTTG
CGTCTCCCTCCCACCGAGTATTGCACGCAATTTTGATGCTACTATCGAGC
GAGTTCATGATAAAGAATGGGATCCATCGCGTGTTCGAGACAGTGTGTTG
GCGCGATGGAATTGACGCAACAAGCAGATAAAAACGAAAAGTAGTTCATA
GCGAAGTGCGTTCTGTTCCCTACGAGACGGAAGTTCTCAAGCCGCTACAT
GAACCATGTTGAAAATGTCCTCAGAGTACGGCGGTGGGATCGGAACTGCT
CTCCTGAGACGGTAGACTCGACGTATGCCCCCTTGACGTTTCAAAGCGTT
GCCCGTAGCTACGCCAGATTCAAGTAACGTTAGAATGGAACAACTTGTGC
AGCGTGTTTTCTCCGCATGTTGATGCACGTCTCGGCGAAACCTCTGCTCG
CTTTGAATGGACGGACTTCCTTCCATGGCCGGTATTCTGCTATCGTGCCA
GACATCGGCCTCGCCGCACTTCTTTCAACGCACCCTTGAGATACTTTTCG
TGATTCATGGCCATGTAGACATGTGAGGTAAATTTCCCATTCGGTTGCAA
ATGCTTGCGCACCTTTTTACAGGATGGAAGCGAGAGCGACCCGTGCCACG
TCTCGCTCGTCGGCAAAGGGGCCATCCTGCCCGGTGCGTTACGCGCAC GC
AAGGGGGGTTGGCAAGACGCCATCAGGGTTGTGGAGGTACGAGATATCAC
AACACTGGCCCGGGTAGAGCGGTCAATTGTGACCGGTGGAGAGCCCAGTT
AGCGTCGTACCACGGAAAACCTACCACCGCGTGCGCTATGGTTTCATCGA
AGCATCTTTGCCTCATATCGAGGGATACGAATTCGTCTCATGTTGGGCTA
GGGTCCGGGGAATCGGCCCCGGTCGAGAAACGTCCAGCGGTGTTGTGTTT
GTCAGTGGTTGATTCTACCTTACGAGGTTGTCGTGCAAGGCACGGCATAG
ACACGTTCGGGCCGTGGCGGACATGCCCGTGTTGCTTTCATTTCGTCCTG
CGTGTCACGCGTCCGAGCCATAGGGCCCTACCCGCTGATAGTCTACCGTG
GTACTGACGCATGATGCAGCATGCGCTCCCACTGGAGATCCTCTTAACGT
AAGAGGCGGAGAGATGGTACCCCCCGCCAGACCGACTTTCAAAGCTCGAT
TGCTCCACAAAGGGATGCGCAGAAAGAGTCCGATGCGCCTACGGAAAGCT
TCGACAAGATGCTCCCGAAACCGCCATGTTTGGTGTTGGCACAATCTTGG
TTGTAGAGTAATCCAGCTTTGAAAATCGGTCTAGGTGCCTTCTTCGCGGC
CTCTTGCGTATTGTTCCCGAGGCTCTGTGTGGGGTATGCCAGTATCGACT
ATTTATCTAGGTTTTAGTCTAGGACTCTTGACTGGGCACCTGTTATATTA
GTCAAATATTCCAACCCAATGTCATATTGAGCGTTAGTTTCGTAACTCCC
GGGTTCTGAAAGCGGCGGTGCTTACTGTATCATGTCGCGTTCCGCCTCTT
CTGGTTGGTTGCCTTGCGCCAGGCCAGCAACTACGGACCGATCGCGCAGA
GGAAAAAACACATCGTGGGAGGGCCGGTTCCTGGGCACTATGACGTGGGA
GCACTCCTGCAGATGACAACCGGGTGGACGTTGGGCCATCTGTCTTCGCT
CGTCAGGTTGGTCATAGGATTTATTCACCATTTCTTGTTGTTGTGGTGTG
CTCATAGTTGACTTGCGTGTCGTGATCGACTATTAGGTCCGTATTTGGGA
CTGGTTAGAGCTCGTTTTTTCCTCGCGTGACGAACAGCTTCATCTGGTTC
TATCGACCCCTTTCCAAGTATGTCTAACTCCTCCATCGCCCCGAGTTTTC
GCTGTCAAGCTTGCTCCGCCGTTAGATCTGATCGGGTTTTGTCCCATCCT
TTCGAGCGTGTGCTTTTCTCGGCAACCCCTGTCGTGCCGAGTCGGGTACG
GTCCACGCTTTATTTCAAGTTGTTTGAAAACCCGTCGTTGGCTTCAGGTT
GAAATTGAATCCATTATGTTCAGGGAAATGGTGCCAGTCGTGGTGGAATG
AAATGGCTGTTTTGCACTCCCACAAACAATCATATTATCCAACAGCAGCG
TGCGCACATGTATGGACGAAAGAACTGTCATCCGAAGCATTCCGATTTGG
AGGCACATATGTGTTTGTGAACCCTCCTGGTGGCCCTGCAAGCAGTGTCA
TTCTTACACGTGGTGTGCGTGCATTCTGTTCACGGCTTGGTGTCAAGGGA
CTACGAAATACCAGTTTCCCTTGCTTCCCGGGGAGGCAACAGAAATCACG
TATGCTCTAGTTGCTCTCCCGGCACCCACCTCCAGTACATGAGTATTCCC
TCGCCTCTGGTAGCATGCGCAGCAAGGGACCGCACAACACGGTTCCTCGA
CTCCGTCTACTACAAGCAGTCCTTACCCATAATGGGCACAGTCACACTCG
ACCCAACATCACTGTGGTACCCTCTCCCCTCGTCTGACTCGCCAGGATGA
AGGAGGAGGAGTCGAGGAAGGAGGAATCCATGTTGCGGGAGATCGACGAC
GAGAGGAGCCGTATCGAGGCCGCT GTAAGTCCTTGGCAGTGCTGTCTGTA
GAGTACCAGGTAGTAATCACCCTGCGATGTTTTCTCCACGGTATTGCAGA
CTCTTTCGCGGCCCTCTACATCTCGCAACGTGGGTAGTGCTTGGAGTTGA
GCCGACACATCATACAAAGGCACGTTATTACTTATTATGTAGACTAGATG
ATGCAATGGTTTGTTTATCTTCAACCAATCTTGACGTCGTTTTCACATGC
GACGAAAATGCTGACAGGA TGCGGCAGAAACGGAGTATGGGAGGCGCGGA
GGCATTGGCAAGCGCGTCTCATTTTATGAAAACTGACATGGGTACACGGC
AGGCGGGCCAGCATAAGCACAATGGACAAGCAGAGTAGATAAGGAAGACA
CACGATCCCGCTGACACAAATATTAGGGAAGGCACCCAGTAATGATAGAT
ATATAGCAGGCCTGCGCGGCTCTTCGTGCCGGGACAAGGGAAATGTCCGA
TTGAGTTATGCTATGCCGTAGTATCGAAACCATAGGCTTCGGCGTCGATC
GGGAGCAGCGCATCAAGTTGGAATGCCGCAGGGGTAGTAGGTGAGCTGGC
AACGTTGTACGTAGAACGGTAGAACGGTCACATTTGTTTTGGGCGGCGGC
CAGCGGAAACAAATAACCCCCCGCACTTGCCTGCCCACACTTACTTGCAC
TGACAGCAGTCTTTTGATTGTATACATAACCTCAGAGAAACACCACCCGT
TCGAGATAACACCACAGCAGTCGAAGGGGATGTGTTGAGGTCTTTATAGT
GAGTGAAGAAACCGGCTGGATATAGGGTCTTTTTGAGACTGCACACTGAC
ATATTGTCAGTGATAATGCCAGCAGGTGCTACAGTAGTAATCACACAATC
ACTCTACAGTTGTATAGGTATACATATCACCAGACATCTCCCCCGTAGTT
TTGCTGTCTACAGAGGTCAAGACAAAAAAATCGAGGAGAAACCCTCTGTT
ACGTCGTGTGTTGTGACATTCTGCCTTCACAGGAACACGCCGCATTGCCG
CTTGGTTGCTGGAACTAGATGATTGCTGCTGTTGATCTACTACAATTAAT
ACATGCGGC back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:16550..21508+
>mRNA_Ecto-sp6_S_contig103.879.1 ID=mRNA_Ecto-sp6_S_contig103.879.1|Name=mRNA_Ecto-sp6_S_contig103.879.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=690bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:16550..21508+ (Ectocarpus species6 EcLAC_371) back to top