mRNA_Ecto-sp6_S_contig102.876.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig102.876.1
Unique NamemRNA_Ecto-sp6_S_contig102.876.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: D7G951_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G951_ECTSI)

HSP 1 Score: 573 bits (1477), Expect = 2.050e-203
Identity = 276/288 (95.83%), Postives = 282/288 (97.92%), Query Frame = 1 
Query:  562 MVAGARNADAIEFPLYKDQAPQPVSSMPWLKQHMLDGPLRGFLQQYYSHDDEEEGREGTSAKILSDRHMHRGKTALFLFLMYHTNEQIQGEVFYMDEDMMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRKKHLPKLRRLHAMGTAMAKALSLQAEVRELSHPSANVIRCGYHVMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEASWVERRLEERGSLGLDMRTFRELEHVKLRCFRCPGEPEFRDMESLKAHNRACTAPVPAGGRHDPAALDVRRGSST 1425
            M AGARNAD IEFPLYKDQAPQPVSSMPWLKQHMLDGPLRGFL+QYY+HDDEEEGRE TSAKILSDRH+HRGKTALFLFLMYHTNEQIQGEVFYMDED+MVTYDGFPKGKFHLLVVPRETFLNVTGPSALRK+HLPKLRRLHAMGTA+AKALSLQAEVRELSHPSANVIRCGYH MPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEASWVERRLEERGSLGLDMR FRELEHVKLRCFRCPGEPEFR MESLKAHNRACTAPVPAGGRHDPAALDVRRGSST
Sbjct:    1 MAAGARNADPIEFPLYKDQAPQPVSSMPWLKQHMLDGPLRGFLEQYYNHDDEEEGREWTSAKILSDRHLHRGKTALFLFLMYHTNEQIQGEVFYMDEDVMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRKEHLPKLRRLHAMGTALAKALSLQAEVRELSHPSANVIRCGYHAMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEASWVERRLEERGSLGLDMRNFRELEHVKLRCFRCPGEPEFRHMESLKAHNRACTAPVPAGGRHDPAALDVRRGSST 288
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: A0A6H5KT50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT50_9PHAE)

HSP 1 Score: 563 bits (1450), Expect = 6.470e-197
Identity = 281/336 (83.63%), Postives = 298/336 (88.69%), Query Frame = 1 
Query:   64 FCTGPDRADRPRWAGLGGCSSTRNPGERDWGNVRRRTHQEPADERRGSAEGEARKLGPWRDKRGQRCQWRQEANEPSGGARGGGGDRAETRRCTPTWGTAGGETRDRGRGGAARKAEGLGKLGVRPAQDPRRIPLTSRGLQHPRSPPSASLDKTGATCHSHDVPVGMVAGARNADAIEFPLYKDQAPQPVSSMPWLKQHMLDGPLRGFLQQYYSHDDEEEGREGTSAKILSDRHMHRGKTALFLFLMYHTNEQIQGEVFYMDEDMMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRKKHLPKLRRLHAMGTAMAKALSLQAEVRELSHPSANVIR 1071
            F  GP RA+RPRWAG GGCSSTRN GERDWGN RRR HQ+P  ERRG  EGEAR++G WRDKRGQ CQWRQE NEPSGGARGG G+RAETRR TPTWGTAG  TR+ G GGA RKAEGLGK GVRP QDPRRIPLT RGL+HPRSPPS +LDKTG TCHSH VP GM AGARNADAIEFPLYKDQAPQPVS MPWLKQHMLDGPLRGFL+QYY++DD+EEG E T AKILS+RH+H  K ALFLFLMYHTNEQIQGEVFYMDE+MMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRK+HLPKLRRLHAMG A+AKALSLQ EVRELSHPSANVIR
Sbjct:  105 FPQGPGRANRPRWAGQGGCSSTRNRGERDWGNARRRVHQDPTGERRGPGEGEAREIGSWRDKRGQGCQWRQEGNEPSGGARGG-GERAETRRYTPTWGTAGDGTREGGGGGATRKAEGLGKFGVRPVQDPRRIPLTHRGLRHPRSPPSTNLDKTGTTCHSHGVPAGMAAGARNADAIEFPLYKDQAPQPVSRMPWLKQHMLDGPLRGFLEQYYNNDDDEEGHEWTGAKILSNRHLHSWKAALFLFLMYHTNEQIQGEVFYMDENMMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRKEHLPKLRRLHAMGAALAKALSLQVEVRELSHPSANVIR 439
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BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: A0A6H5K130_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K130_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.820e-67
Identity = 104/113 (92.04%), Postives = 107/113 (94.69%), Query Frame = 1 
Query: 1087 MPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEASWVERRLEERGSLGLDMRTFRELEHVKLRCFRCPGEPEFRDMESLKAHNRACTAPVPAGGRHDPAALDVRRGSST 1425
            MPSQEPLHLHV+SMDLDGTGLKRKTHWNSFTTDLFLE SWVERRLEERGS+GLDM    ELEHVKLRCFRCPGEPEFRD+ESLKAHNRACTAPVPA GRHDPAALDVRRGSST
Sbjct:    1 MPSQEPLHLHVISMDLDGTGLKRKTHWNSFTTDLFLETSWVERRLEERGSIGLDM----ELEHVKLRCFRCPGEPEFRDLESLKAHNRACTAPVPAAGRHDPAALDVRRGSST 109
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: D7G952_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G952_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.570e-57
Identity = 107/131 (81.68%), Postives = 110/131 (83.97%), Query Frame = 2 
Query:   38 SFHVFTGRVSVQDRIGPTDQGGPGWAGAARRETQERGIGGTYGGERTRSQRTSGEDLQKERRESLGPGGTSEAKDASGGRKQTSHPEEHEEEEETEQKHGDAXXXXXXXXAKRGTAAEAGPLERPKAWENL 430
            S         ++DR+GPTDQGGPGWAGAARRETQERGIGGTYGGERTRSQRTSGEDLQKERRESLGPGGTSEA DASG RKQTSHPEEHEEEEETEQKHGDA        AK GTAAEAGPLE PKAWENL
Sbjct:   48 SIRAHAAMSFLKDRVGPTDQGGPGWAGAARRETQERGIGGTYGGERTRSQRTSGEDLQKERRESLGPGGTSEANDASGDRKQTSHPEEHEEEEETEQKHGDAHQPGERPEAKLGTAAEAGPLEGPKAWENL 178
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: D8LEA7_ECTSI (FHA-HIT protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA7_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.980e-49
Identity = 95/185 (51.35%), Postives = 120/185 (64.86%), Query Frame = 1 
Query:  820 QIQGEVFYMDEDMMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRK-KHLPKLRRLHAMGTAMAKALSLQAEVRELSHPSANVIRCGYHVMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEASWVERRLEERGSLGLDMRTFRELEHVKLRCFRCPGEPEFRDMESLKAHNRACTAPVP 1371
            ++Q EV++ D   +V YDG+PK ++HLL++P+  FL+V   S LR+ +HL  LR+LHA  TA+A+ALS Q          A VIRCGYH +PS EPLHLH++S D D   L ++ HWNSFTTD FL+ASWVE RL ERGSLGLD    + LE   LRCFRC       +M  LK H   C  PVP
Sbjct:  298 ELQREVYFSDNQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELRRDEHLSSLRQLHATATAVAEALSQQG---------AGVIRCGYHGIPSLEPLHLHIISQDFDSERLTKRKHWNSFTTDFFLDASWVEARLLERGSLGLDKERLKALEATPLRCFRCHSP--MTNMTKLKEHLLGCNLPVP 471
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: A0A6H5KUS4_9PHAE (HIT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS4_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 2.800e-38
Identity = 70/158 (44.30%), Postives = 98/158 (62.03%), Query Frame = 1 
Query:  778 KTALFLFLMYHTNEQIQGEVFYMDEDMMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRKKHLPKLRRLHAMGTAMAKALSLQAEVRELSHPSANVIRCGYHVMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEASWVERRLEERGSLGLDM 1251
            K    LF     +  +Q ++++ DE  MV YDG+PK + HLL++PR +FL+V  PS LR++HL  LR++HA+G A+A+ LS Q             IR G H +PS EPLH+H++S D D   ++   HWN FTTD+FLE +W+E  LE  G L LDM
Sbjct:   41 KEVFHLFFKNCDHPALQDQIYFQDERFMVIYDGYPKARHHLLLMPRPSFLDVIRPSDLRREHLSALRQMHALGRAVAEGLSQQG---------IGEIRIGVHAVPSMEPLHMHIISQDFDSERMRMPRHWNIFTTDIFLEPAWIEEMLERHGCLQLDM 189
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BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: A0A6H5K612_9PHAE (HIT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K612_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.610e-27
Identity = 65/146 (44.52%), Postives = 92/146 (63.01%), Query Frame = 1 
Query:  778 KTALFLFLMYHTN-EQIQGEVFYMDEDMMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRK-KHLPKLRRLHAMGTAMAKALSLQAEVRELSHPSANVIRCGYHVMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEASWV 1209
            K  LF +L      +++Q EVF+ ++  +V YDG+PK ++HLL++P+  FL+V   S LR+ +HL  LR+LHA   A+A+ALS Q          A VIRCGYH +PS EPLHLH++S D D   L ++ HWNSFTT  F    ++
Sbjct:  272 KAVLFQYLKDRPMPDELQREVFFSNDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELRRDEHLSSLRQLHATAAAVAEALSQQG---------AGVIRCGYHGIPSLEPLHLHIISQDFDSERLTKRKHWNSFTTGTFFPGCFL 408
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: D7G953_ECTSI (Aprataxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G953_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 3.720e-27
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 1 
Query:  778 KTALFLFLMYHTNEQIQGEVFYMDEDMMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRKKHLPKLRRLHAMGTAMAKALSLQAEVRELSHPSANVIRCGYHVMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTT 1182
            K    LF     +  +Q ++++ DE  MV YDG+PK + HLL++PR +FL+V  PS LR++HL  L ++HA+G A+A+ LS Q             IR G H +PS EPLH+H++S D D   L+   HWN FTT
Sbjct:   40 KEVFHLFFKNCDHPALQDQIYFQDERFMVIYDGYPKARHHLLLMPRPSFLDVMRPSDLRREHLSALHQMHALGRAVAEDLSQQG---------IGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTT 165
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BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: A0A7S2SCH0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCH0_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.440e-27
Identity = 72/177 (40.68%), Postives = 97/177 (54.80%), Query Frame = 1 
Query:  832 EVFYMDEDMMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRKKHLPKLRRLHAMGTAMAKALSLQAEVRELSHPSANVIRCGYHVMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLE----ASWVERRLEERGSLGLDMRT-FRELEHVKLRCFRCPGEP-EFRDMESLKAH 1344
            +VFY DE  +V YD +PK + HLLV+P+ +FL++  P      HLP+LR LH    ++AK L       + S  +   +RCGYH +PS EPLH+HV+S D D   LK K HWNSFTTD F+     A WVE        LG    T ++E+    L      G    F++M +LK H
Sbjct:  273 QVFYEDECCLVVYDAYPKARTHLLVLPKASFLSLRRPQFASAGHLPRLRHLHDRAASVAKWL-------QSSGAAVAPVRCGYHAIPSLEPLHIHVISQDFDSPCLKTKKHWNSFTTDYFVPCEVFARWVEGDKSADPWLGESTATKWKEMLAKPLEIISSSGASLTFKNMPALKEH 442
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Match: C1FFK5_MICCC (zf-C2HE domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FFK5_MICCC)

HSP 1 Score: 114 bits (284), Expect = 1.530e-25
Identity = 68/173 (39.31%), Postives = 93/173 (53.76%), Query Frame = 1 
Query:  841 YMDEDMMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRKKHLPKLRRLHAMGTAMAKALSLQAEVRELSHPSANVIRCGYHVMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEASWVERRLEERGSLGLDMRTFRE-LEHVKLRCFRCPGEPEFRDMESLKAHNRAC 1356
            + D D++V  D +PK + H LV+ R+T L   GPSALR  H   + R+  +G A+A   +  A+V       A ++R G+H  PS   LH+H+VS DL G+G+K + HWN+F TD F EA  V   L  RG +  D       +   KLRC RC G+  F  M  L AH   C
Sbjct:   47 WFDSDLVVLTDKYPKARTHYLVLARDTSL-AAGPSALRASHAELVERMATVGRAIAAENA--AKVNGGEETIAPLLRAGFHAKPSMPTLHMHLVSSDLRGSGMKTRRHWNTFATDFFKEADDVVAALRARGRVDWDEEEEEAGVAMAKLRCHRC-GDGPFAQMPKLFAHLDEC 215
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G951_ECTSI2.050e-20395.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT50_9PHAE6.470e-19783.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K130_9PHAE1.820e-6792.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G952_ECTSI1.570e-5781.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEA7_ECTSI1.980e-4951.35FHA-HIT protein n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5KUS4_9PHAE2.800e-3844.30HIT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K612_9PHAE1.610e-2744.52HIT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G953_ECTSI3.720e-2742.22Aprataxin n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A7S2SCH0_9STRA4.440e-2740.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
C1FFK5_MICCC1.530e-2539.31zf-C2HE domain-containing protein n=1 Tax=Micromon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:629355..632582 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score578.9
Seed ortholog evalue2.1e-162
Seed eggNOG ortholog2880.D7G951
Preferred nameHNT3
Model size1428
KEGG koko:K10863
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003697,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006163,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0008409,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016819,GO:0016895,GO:0017076,GO:0019001,GO:0019002,GO:0019637,GO:0019693,GO:0030983,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033554,GO:0033699,GO:0034641,GO:0035312,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0047627,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0120108,GO:0140097,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1905108,GO:1990165
Exons7
EggNOG free text desc.DNA 5'-adenosine monophosphate hydrolase activity
EggNOG OGsKOG0562@1,KOG0562@2759
Ec32 ortholog descriptionHIT-like domain
Ec32 orthologEc-13_003010.1
EC3.1.11.7,3.1.11.8,3.1.12.2
Cds size1428
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.876.1prot_Ecto-sp6_S_contig102.876.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig102 629355..632582 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348739.3926713-CDS-Ecto-sp6_S_contig102:629354..6295321682348739.3926713-CDS-Ecto-sp6_S_contig102:629354..629532Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 629355..629532 -
1682348739.408705-CDS-Ecto-sp6_S_contig102:629716..6297831682348739.408705-CDS-Ecto-sp6_S_contig102:629716..629783Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 629717..629783 -
1682348739.416181-CDS-Ecto-sp6_S_contig102:630114..6302271682348739.416181-CDS-Ecto-sp6_S_contig102:630114..630227Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 630115..630227 -
1682348739.4241865-CDS-Ecto-sp6_S_contig102:630515..6306641682348739.4241865-CDS-Ecto-sp6_S_contig102:630515..630664Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 630516..630664 -
1682348739.432807-CDS-Ecto-sp6_S_contig102:631120..6312131682348739.432807-CDS-Ecto-sp6_S_contig102:631120..631213Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 631121..631213 -
1682348739.4439807-CDS-Ecto-sp6_S_contig102:631506..6319031682348739.4439807-CDS-Ecto-sp6_S_contig102:631506..631903Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 631507..631903 -
1682348739.4602783-CDS-Ecto-sp6_S_contig102:632151..6325821682348739.4602783-CDS-Ecto-sp6_S_contig102:632151..632582Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 632152..632582 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig102.876.1

>prot_Ecto-sp6_S_contig102.876.1 ID=prot_Ecto-sp6_S_contig102.876.1|Name=mRNA_Ecto-sp6_S_contig102.876.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=476bp
MMHTTVGGKCRALVPRFYRPRFCTGPDRADRPRWAGLGGCSSTRNPGERD
WGNVRRRTHQEPADERRGSAEGEARKLGPWRDKRGQRCQWRQEANEPSGG
ARGGGGDRAETRRCTPTWGTAGGETRDRGRGGAARKAEGLGKLGVRPAQD
PRRIPLTSRGLQHPRSPPSASLDKTGATCHSHDVPVGMVAGARNADAIEF
PLYKDQAPQPVSSMPWLKQHMLDGPLRGFLQQYYSHDDEEEGREGTSAKI
LSDRHMHRGKTALFLFLMYHTNEQIQGEVFYMDEDMMVTYDGFPKGKFHL
LVVPRETFLNVTGPSALRKKHLPKLRRLHAMGTAMAKALSLQAEVRELSH
PSANVIRCGYHVMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEA
SWVERRLEERGSLGLDMRTFRELEHVKLRCFRCPGEPEFRDMESLKAHNR
ACTAPVPAGGRHDPAALDVRRGSST*
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mRNA from alignment at Ecto-sp6_S_contig102:629355..632582-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.876.1 ID=mRNA_Ecto-sp6_S_contig102.876.1|Name=mRNA_Ecto-sp6_S_contig102.876.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3228bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:629355..632582- (Ectocarpus species6 EcLAC_371)
ATGATGCACACAACCGTGGGGGGAAAATGTAGGGCACTCGTTCCACGTTT
TTACCGGCCGCGTTTCTGTACAGGACCGGATCGGGCCGACCGACCAAGGT
GGGCCGGGCTGGGCGGGTGCAGCTCGACGCGAAACCCAGGAGAGAGGGAT
TGGGGGAACGTACGGAGGAGAACGCACCAGGAGCCAGCGGACGAGCGGCG
AGGATCTGCAGAAGGAGAGGCGCGAAAGCTTGGGCCCTGGAGGGACAAGC
GAGGCCAAAGATGCCAGTGGCGGCAGGAAGCAAACGAGCCATCCGGAGGA
GCACGAGGAGGAGGAGGAGACAGAGCAGAAACACGGAGATGCACACCAAC
CTGGGGAACGGCCGGAGGCGAAACGAGGGACCGCGGCCGAGGCGGGGCCG
CTCGAAAGGCCGAAGGCCTGGGAAAACTTGGGTGATTAATAATATGGTTT
CTCGCGTATGGAACAACGTTGAGTTGACCGGACAAGAGCAGCGATGGCTG
TAGACAATTTGGATGGGTAGAGGGAGAGTCGAGCTTTGTCGAGATGCTTG
TCGAATGCTTTGATGGCTGTTGGAAGCAAAGAACCTGCCGCTGAAGTTTC
AAAAACAAATACTTGCTACAGCAGTAGTTCGCCAACAGCTTCGCCTCACT
TGTGGTTAACCGTTTTGCCGCACCAGTAGTGTTCGGCCGGCACAAGACCC
CCGGCGAATCCCGCTGACTTCCCGGGGCCTCCAGCATCCGAGGTCACCTC
CATCCGCGAGCCTCGATAAGACTGGTGCCACCTGCCACAGTCACGACGTC
CCAGTTGGAATGGTCGCCGGCGCACGGAACGCTGACGCTATCGAATTTCC
CCTCTACAAGGACCAGGCCCCGCAACCGGTGTCGAGTATGCCTTGGCTCA
AGCAGCACATGTTGGACGGACCTCTTCGGGGCTTCCTGCAGCAGTACTAC
AGCCACGACGACGAAGAAGAGGGTCGCGAGGGGACGAGTGCAAAGATCCT
TTCGGACAGACACATGCACAGGGGCAAGACGGCCCTTTTTCTGTTCCTGA
TGTACCACACGAACGAACAAATTCAGGTTCGGTAGCAGTCTGACCGCGTA
CGTTGCATATTGTGCCTTCAGGCGTCGTCGCCTCGAGGAGAAGATCGTGG
GAAATGGTCACACAAACTCTTAACGTTGATACAACAACCGTCGCAAAATG
TAGCACGACTTACTGTTGTCAACATACACAGGCTCGTCTCCCGTCGCGAC
GTTTGTGAGAAACCCATCTTTGCCGGCGATATCGTGATTCTGTTGTTTTC
GTCGTTCGTTCTTTTCCTCTTGCTTTTGTCACCGCGGTGCACCTGATGTT
TGCCCTTGAAACCTCGTAGGGCGAGGTATTCTACATGGATGAGGACATGA
TGGTCACGTACGACGGCTTCCCGAAGGGGAAGTTCCATCTTCTGGTGGTC
CCAAGAGAGACGGTGAGTGCCTGCCGGTATGTTAACTATCATTTTTTCCT
GATCGCGGATTGGGTTGATGCGTGGCTCAAGGCTTGTCGGTATGTGTGCA
TTGGGGAGTACCATGAGTGTCGATGCAACGTGCTCATCCACGGTAGACGG
GCGGCGTAGGGAAGACATATTGAAGTATTCGTTTTCGCCTTTGGAGTTGC
TTTAGGGTAGCCCAAGAGAACGCATGACTGGGGGCGAAAACTATTTCCTG
AATTCTGACGTCCATCCTCACAGTCTTCGGAGTCTTGACGCTCCTCTTTC
AACACCTCCACTTTCTTTTTTTTCTTAATATAACACAACGAATCCATCTC
TATCATAGAAAAAGAGTCTGAGACAATTTAGCAATGAATTCATAGCGTCA
GAAAGTACCTGTATGTCTACGATTTCCCACAGAGCATATAACTTTCCTTT
GTTTTTGCTGGTCTGAAGTTTCTCAACGTGACGGGGCCGAGCGCCCTCCG
GAAGAAACACCTGCCGAAGTTGCGCCGCTTGCACGCCATGGGAACTGCGA
TGGCAAAGGCCTTGTCCCTTCAGGCGGAAGTCAGGGAATTGTCTCACCCT
TCTGCAAACGTGATCAGGTGAAAAGAGATGAAACGACACTAGGTCATGCC
TCTCGCCCGGCGTGGCGACGTACATATCGGGCATGATATACGGAGTGGGC
CGGGCTACCTCGTAACCATTTGCACATCGAGAGGCGCCCAAATGATTCTA
CATCGGTGCGTGGTTGAGAAATCACCATCGCACCACATACTACCCCGAGC
TAGAGGCAATCACAGTCGGCCTGAAACTTCTCTGTGACGGAAACCAAGCC
CTTCCGTGCTGGAACCAGCACACTTTTTTGCCGAATGTTTTTGCTCGTGT
GACAGGTGCGGGTACCATGTGATGCCATCGCAAGAGCCGTTGCACTTGCA
CGTTGTCAGCATGGACCTCGACGGGACGGGCCTGAAGCGCAAGACTCACT
GGAACAGCTTCACGACAGGTAGCTCGGGTTCTACACGGAAGCGAGGCGTT
CGTAGTTGCGCGGTGTGCCACCGCCACGGCCGTGGCCGCCGCCGCCGCCG
CTGCTGCTGCTGCAAGGGTGCAGCAGCATGCAACGATACTCCAATCAAGG
CATTCAATCCTTAGACTTCCTAGAATGCGTTTTTCTTTTTTGCGCACCTG
TATTGCCACGCCCACTGACTGCGACGAAGCAACCCGGATCGAACGCGTTT
GTACGTGTGCCGCTCATGTTAGCCTTTGGTTTTGACCAACTCTCCTTGCC
GTTCCCCAATTTGTTTTCCGTACATTGCCCACTGTACCTCCCTTGACAGA
TTTGTTTCTGGAGGCGTCCTGGGTAGAGAGGCGGCTGGAGGAGCGGGGAA
GCCTCGGTCTCGACATGTAAGAGATGCTCTTCTGCTTGTGTCCCCGTCGT
TGCTGCTGAACCGCTGTTGGTGAACACGCGGGCAACACCGTCGGACAAAT
TACGCTCGGTCGGCCTCGCTCTGTTCCCGCATTATTTGACCGGTTGACTG
ACCCAAAACATAATCCTTCCGTCATGTCCTTCTTTGGTCACGTCCGCCAG
GCGAACCTTCAGGGAACTCGAGCATGTGAAGTTGAGGTGCTTCCGCTGCC
CGGGCGAGCCGGAGTTTCGAGACATGGAATCCCTTAAAGCACACAACCGT
GCGTGCACCGCGCCGGTTCCGGCAGGAGGCCGCCATGACCCCGCGGCCCT
CGACGTACGTAGAGGTTCTTCGACGTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:629355..632582-

>mRNA_Ecto-sp6_S_contig102.876.1 ID=mRNA_Ecto-sp6_S_contig102.876.1|Name=mRNA_Ecto-sp6_S_contig102.876.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1428bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:629355..632582- (Ectocarpus species6 EcLAC_371)
ATGATGCACACAACCGTGGGGGGAAAATGTAGGGCACTCGTTCCACGTTT
TTACCGGCCGCGTTTCTGTACAGGACCGGATCGGGCCGACCGACCAAGGT
GGGCCGGGCTGGGCGGGTGCAGCTCGACGCGAAACCCAGGAGAGAGGGAT
TGGGGGAACGTACGGAGGAGAACGCACCAGGAGCCAGCGGACGAGCGGCG
AGGATCTGCAGAAGGAGAGGCGCGAAAGCTTGGGCCCTGGAGGGACAAGC
GAGGCCAAAGATGCCAGTGGCGGCAGGAAGCAAACGAGCCATCCGGAGGA
GCACGAGGAGGAGGAGGAGACAGAGCAGAAACACGGAGATGCACACCAAC
CTGGGGAACGGCCGGAGGCGAAACGAGGGACCGCGGCCGAGGCGGGGCCG
CTCGAAAGGCCGAAGGCCTGGGAAAACTTGGTGTTCGGCCGGCACAAGAC
CCCCGGCGAATCCCGCTGACTTCCCGGGGCCTCCAGCATCCGAGGTCACC
TCCATCCGCGAGCCTCGATAAGACTGGTGCCACCTGCCACAGTCACGACG
TCCCAGTTGGAATGGTCGCCGGCGCACGGAACGCTGACGCTATCGAATTT
CCCCTCTACAAGGACCAGGCCCCGCAACCGGTGTCGAGTATGCCTTGGCT
CAAGCAGCACATGTTGGACGGACCTCTTCGGGGCTTCCTGCAGCAGTACT
ACAGCCACGACGACGAAGAAGAGGGTCGCGAGGGGACGAGTGCAAAGATC
CTTTCGGACAGACACATGCACAGGGGCAAGACGGCCCTTTTTCTGTTCCT
GATGTACCACACGAACGAACAAATTCAGGGCGAGGTATTCTACATGGATG
AGGACATGATGGTCACGTACGACGGCTTCCCGAAGGGGAAGTTCCATCTT
CTGGTGGTCCCAAGAGAGACGTTTCTCAACGTGACGGGGCCGAGCGCCCT
CCGGAAGAAACACCTGCCGAAGTTGCGCCGCTTGCACGCCATGGGAACTG
CGATGGCAAAGGCCTTGTCCCTTCAGGCGGAAGTCAGGGAATTGTCTCAC
CCTTCTGCAAACGTGATCAGGTGCGGGTACCATGTGATGCCATCGCAAGA
GCCGTTGCACTTGCACGTTGTCAGCATGGACCTCGACGGGACGGGCCTGA
AGCGCAAGACTCACTGGAACAGCTTCACGACAGATTTGTTTCTGGAGGCG
TCCTGGGTAGAGAGGCGGCTGGAGGAGCGGGGAAGCCTCGGTCTCGACAT
GCGAACCTTCAGGGAACTCGAGCATGTGAAGTTGAGGTGCTTCCGCTGCC
CGGGCGAGCCGGAGTTTCGAGACATGGAATCCCTTAAAGCACACAACCGT
GCGTGCACCGCGCCGGTTCCGGCAGGAGGCCGCCATGACCCCGCGGCCCT
CGACGTACGTAGAGGTTCTTCGACGTGA
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