mRNA_Ecto-sp6_S_contig102.874.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig102.874.1
Unique NamemRNA_Ecto-sp6_S_contig102.874.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D7G975_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G975_ECTSI)

HSP 1 Score: 1157 bits (2992), Expect = 0.000e+0
Identity = 549/573 (95.81%), Postives = 555/573 (96.86%), Query Frame = 1 
Query:    1 VSWPDCH*SRAHHFVDKRLLLAVNKSKRCVRFAFRPDAGLRMCVGI*ASFHRYWRVRHECPIARVPTRPGHERYQQAAYIDADFLLLSSGGIGGHTDGNIYGHACAKNCVAVAAINWQEGDGPAGSFEDPETSRVEHFSSTGPCIVDPGSGKETREKPTTCAADGAATSTIGFSEFLGTSAAAPVAAAIATIVRAACFPRVVEYGEIMEMLTNYEYTIDYTNDADGAAETWGNEAGHGIISASQMLAWVEENCSEACS-ASGSTPAPTPTIAQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVIPLSPPTEDYYVGCFADDLADRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERDTC 1716
            VSWPDCH SR H FVD+RLLLA NKSKRCVRFA  PDAGLRMCVGI ASFHRYWRVRHEC IARVPTRPGHERYQQAAYIDADFLLLSSGGIGGHTDGNIYGHACAKNCVAVAAINWQEGDGP GSFEDPETSRVE+FSSTGPCIVDPGSGKETREKPTTCAADG ATST GFSEFLGTSA+APVAAAIATIVRAACFPRVVEYGE+MEMLTNYEYT+DYTNDADGAAETWGNEAGHGIISA+QMLAWVEENCSEACS ASGSTPAPTPT AQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYG ECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRN YYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEV PLSPPTEDYYVGCFADDL DRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGG VAFSLYERDTC
Sbjct:    6 VSWPDCHCSRVH-FVDERLLLAGNKSKRCVRFALCPDAGLRMCVGIWASFHRYWRVRHECSIARVPTRPGHERYQQAAYIDADFLLLSSGGIGGHTDGNIYGHACAKNCVAVAAINWQEGDGPGGSFEDPETSRVEYFSSTGPCIVDPGSGKETREKPTTCAADGLATSTTGFSEFLGTSASAPVAAAIATIVRAACFPRVVEYGEVMEMLTNYEYTVDYTNDADGAAETWGNEAGHGIISAAQMLAWVEENCSEACSGASGSTPAPTPTTAQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGGECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNMYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVNPLSPPTEDYYVGCFADDLEDRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGLVAFSLYERDTC 577
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D8LQX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 2.320e-129
Identity = 183/277 (66.06%), Postives = 219/277 (79.06%), Query Frame = 1 
Query:  889 MTPSVCAAYCHRESASYAYYAIQYGNECWCQDTDIDLR-HGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVIPLSPPTEDYYVGCFADDLADRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERDTC 1716
            MTP+VCA YC  + +SY +YA QYG ECWCQD  +DLR HG ATCDY CSGD SI CGGF +F+LYDLE   LP+PP DDNYVGCFADD  DRVLGA++SS+ MTSEACA YCA+ESP N YYATQ+G +CWCA EV LRHG+G C  ACTGDA TTCGGF+AFDLFE+ PLSP +ED+Y GCFADD +DRVL D +S+ DM+L+ CE++CT  +KPFFALQ+  ECWCGGC++LD+G  ++DRHG   C D PC+G+ +R CG   AFSLY R TC
Sbjct:    1 MTPTVCADYCRGQPSSYTHYATQYGRECWCQDESVDLRRHGAATCDYQCSGDDSIVCGGFDSFSLYDLEEGELPSPPTDDNYVGCFADDQNDRVLGAKSSSNEMTSEACASYCADESPGNTYYATQWGHECWCAAEVHLRHGDGTCDMACTGDAGTTCGGFDAFDLFELGPLSP-SEDHYFGCFADDKSDRVLGDKMSSGDMSLQLCEDYCTAMDKPFFALQWGRECWCGGCDLLDEGH-RFDRHGTASCTDHPCTGEASRDCGAYDAFSLYYRGTC 275
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D7FQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI3_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 2.600e-124
Identity = 197/363 (54.27%), Postives = 231/363 (63.64%), Query Frame = 1 
Query:  805 TIAQPGSLGCYKDDPSDRVLTAMWSSPVMTPS---------------VCAAYCHRESA-------SYAYYAIQYGN----------------------------------ECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDL-RHGEGRCAYACTGDAKTTCGGFEAFDLF--EVIPLSPPTEDYYVGCFADDLADRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERDTC 1716
            +  Q  SLGC+ DD SDRVLTA WSS  MTP+                C   C  +S+       S+  Y ++                                     ECWCQ  DIDLRHG+ TCDY CSGD+SI CGGF +FTLY+LE   LP  P  DNYVGCFADD +DRVLG++ SS SMT E CA YCA++SP + YYATQ+G +CWCA +VD  RHGEG C Y CTGD+ TTCGG++AFDLF  E   LSPP+EDYY+GCFADD  DRVLED ISA DMTLE CE HCT  +KPFFALQ+  ECWCGGCE+ DD  D+YDRHG   C D+PC+GD +RQCGG  +FSLY RDTC
Sbjct:   18 STGQEESLGCFGDDRSDRVLTAEWSSSSMTPACWCQGPDIDLRHGDGTCDYVCSGDSSIKCGGFDSFTLYELESEGLPVAPMGDNYVGCFADDKEDRVLGSKMSSGSMTPECWCQGPDIDLRHGDGTCDYVCSGDSSIKCGGFDSFTLYELESEGLPVAPMGDNYVGCFADDKEDRVLGSKMSSGSMTPEVCAAYCADDSPSHTYYATQWGRECWCARDVDYSRHGEGSCDYTCTGDSGTTCGGYDAFDLFKLEEDSLSPPSEDYYLGCFADDKGDRVLEDKISASDMTLETCEEHCTALDKPFFALQWGKECWCGGCELQDDDLDRYDRHGIASCTDYPCTGDGSRQCGGYDSFSLYNRDTC 380
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 2.590e-105
Identity = 163/262 (62.21%), Postives = 196/262 (74.81%), Query Frame = 1 
Query:  958 YGNECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVIPL---SPPTEDYYVGCFADDLADRVLEDMISAVDMTLEACENH-CTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERDTCGKFEV 1731
            +  +CWCQD +IDLRHGE TCDYAC+GD S+ CGG  +F+LY+LE A LPT P DD+YVGCFADD QDRVLG +TSSS MTSE CA YCANES  NK+YATQYG +CWCA  VDLR+GEG C YACTG  +TTCGGFEAFDLFE+  +   SPP+E YY+GCFADD  DRVLED  S+ +M+L+   +H C   N    A +++  CWCGGCE+LD+G  +YDRHGA  C  +PC+G+ +R CGG  AFSLY R TCG  E 
Sbjct:   23 FSRQCWCQDENIDLRHGEGTCDYACTGDGSVVCGGILSFSLYELEEAILPTAPTDDSYVGCFADDRQDRVLGVQTSSSEMTSEVCAAYCANESFGNKFYATQYGEECWCAPSVDLRYGEGTCDYACTGAVETTCGGFEAFDLFELDVVDRSSPPSEHYYLGCFADDQNDRVLEDETSSGNMSLQVSPSHNCLGANN---AAEHT--CWCGGCELLDEGLHRYDRHGATSCTGYPCTGEGSRACGGVYAFSLYYRGTCGSSET 279
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 1.260e-43
Identity = 93/202 (46.04%), Postives = 115/202 (56.93%), Query Frame = 1 
Query:  826 LGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQ-DTDIDL-RHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETS-SSSMTSEACADYCANESPRNKYYATQYGAQCWCA----EEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVIPLSPP 1410
            +GC+ D   DRV   M +S  MT +VC  YC    A+Y   A QYG ECWC  D +++  RH +  CD+AC GDA+  CGGF AF LY +     PT P  D YVGCFADD +DR+LG E      MT   C  YC  E     +YATQYG +CWC     EE   RHG G C   C+GD    CGGF+AF+LF+   ++ P
Sbjct:  436 VGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYM--ATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKI---TEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYC--EERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEP 630
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 5.910e-40
Identity = 92/208 (44.23%), Postives = 111/208 (53.37%), Query Frame = 1 
Query:  790 PAPTPTIAQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQ---DTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSS-SMTSEACADYCANESPRNKYYATQYGAQCWCA----EEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFE 1389
            P   P  A    +GC+ D+  DRV   M +S  MT +VC  YC    A+Y   A QYG ECWC    +T+ D RH +  CD+AC GD +  CGGF AF LY +     P  P  D YVGCFAD+ +D VLG E  S   MT   C  YC  E     +YATQ G +CWC     EE   R G G C   C+GD    CGGF AF+LF+
Sbjct:  391 PVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYM--ATQYGIECWCSVDAETEYD-RHSDGVCDHACGGDEADYCGGFDAFDLYKI---TEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYC--EDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFK 590
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D8LEK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 6.410e-40
Identity = 99/248 (39.92%), Postives = 133/248 (53.63%), Query Frame = 1 
Query:  826 LGCYKDDPSDRVLTAM-WSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQDTDIDLR-HGEAT-CDYACSGDASISCGGFYAFTLYDLEGANLPTP---PADDN---YVGCFADDLQDRVLG-AETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEE-VDLR-HGEGR-CAYACTGDAKTTCGGFEAFDLFEV------IPLSPPTED---YYVGCFADDLADRVLEDMI-SAVDMTLE 1500
            LGCY+DDP DR++  +  S   MT  +C   C        Y+A QY  ECWC   D D   HGE+T C YACSGD S +CGGF A  +Y     + P+P   P  +     +GC+ADD +DR++     S SSMT+E C   C   +    Y+ATQYG +CWC     D   HGE   C YAC+GD   TCGGF+A +++         P   PTE      +GC+ DD  DR++++++ S   MT E
Sbjct:  200 LGCYEDDPEDRIMDNLALSDSSMTTELCELTC----VGSTYFATQYRRECWCGSADADYALHGESTGCTYACSGDTSQTCGGFNAANVYLYPDDSTPSPTPSPIQEGPSPALGCYADDPEDRIMDDLVLSDSSMTTELCELTCEGST----YFATQYGRECWCGSAGADYALHGESTDCTYACSGDTDQTCGGFDAANVYRYPDDSTPSPTPSPTEAASFVALGCYGDDREDRIMDELVLSDPSMTTE 439
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 1.240e-39
Identity = 89/203 (43.84%), Postives = 118/203 (58.13%), Query Frame = 1 
Query:  826 LGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQD-TDIDL-RH-----GEAT-CDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETS-SSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDL----RHGEGRCAYACTGDAKTTCGGFEAFDLFEVI 1395
            +GC+ D+ +DRVL  +  SP+MT ++CA +C    A+Y   A+QYG ECWC   T++D  RH     G+A  CD +C G  + +CGG YAF LY L+G   P P     YVGCFADD +DR L  +     +MT + C  YC  E   + +YATQYG +CWC    D+    RHG+G C   C GD    CGG+ AF LFE +
Sbjct:  317 IGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYM--ALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDG---PMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYC--ERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYL 512
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: A0A8K0SGR6_9HYPO (WSC domain-containing protein n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0SGR6_9HYPO)

HSP 1 Score: 156 bits (394), Expect = 1.100e-38
Identity = 95/307 (30.94%), Postives = 142/307 (46.25%), Query Frame = 1 
Query:  829 GCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQDTDIDLRHG-----EATCDYACSGDASISCGGFYAFTLYDLEGANLPTPP---ADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDLRHGEGR---CAYACTGDAKTTCGGFEAFDLFEVIPLSPPTEDYY-VGCFADDLAD-RVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERD 1710
            GCY++    R L  + + P MT  +C       +ASYAY+ +QYG+ECW  +T   LR G     +  C   C+GD S +CG      L+    A +P       + +  GC+ D L  R L       +MT + C ++CA  +    Y   +YG +CWC + +D+   +     C   C GD    CG     DL+++   +PP  DYY +GC+ D  A  R L ++ +  +MT + C      R    F ++Y  ECW G    +D  P  +   G     D PC+G+    CGG   F+LY  D
Sbjct:   87 GCYEEPKKGRALDHVATDPAMTVELCGEI----AASYAYFGLQYGSECWYGNT---LRKGSHQVDDDACSMPCAGDPSQTCGNGRKLNLWRRSDAYIPVDKEKIGEYDLQGCYVDTLNPRALRRVLGDDNMTPDMCVEFCAGST----YMGLEYGRECWCDDVLDITSFKATLDDCQMPCAGDLSAMCGSPNRMDLYKLNSPAPPDADYYTMGCYYDIGAHHRALPELYADDNMTPQLCAGFAARRGFKHFGVEYGRECWAG--PQID--PAAFPTDGC----DMPCAGNDEVMCGGRTRFNLYTYD 374
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.930e-38
Identity = 90/226 (39.82%), Postives = 113/226 (50.00%), Query Frame = 1 
Query:  826 LGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQ-DTDIDL-RHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETS-SSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVD----LRHGEGRCAYACTGDAKTTCG------------------------GFEAFDLFEVIPLSPP 1410
            +GC+ D   DRV   M +SP MT +VC  YC    A++   A Q+G ECWC  D +I+  RH +  CD  C G+A+  CGGF AF LY +     PT P  D YVGCFADD +DR+LG E      MT   C  YC  E     +YATQYG +CWC    D     RHG G C   C+GD    CG                        GF+AF+LF+   ++ P
Sbjct:   14 VGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFM--ATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKI---TEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYC--EERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYKHESFQPFLAVTLVPGGFDAFNLFKFDGVAEP 232
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G975_ECTSI0.000e+095.81Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LQX7_ECTSI2.320e-12966.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQI3_ECTSI2.600e-12454.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLL4_9PHAE2.590e-10562.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LED7_ECTSI1.260e-4346.04EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LED9_ECTSI5.910e-4044.23EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LEK9_ECTSI6.410e-4039.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXK6_ECTSI1.240e-3943.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K0SGR6_9HYPO1.100e-3830.94WSC domain-containing protein n=1 Tax=Stachybotrys... [more]
A0A6H5JMV6_9PHAE1.930e-3839.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:556093..565577 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score771.5
Seed ortholog evalue1.7e-220
Seed eggNOG ortholog2880.D7G975
Model size1737
KEGG rclassRC00467
KEGG koko:K15920
KEGG ReactionR01433
KEGG Pathwayko00520,ko01100,map00520,map01100
Hectar predicted targeting categoryother localisation
Exons13
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.2.1.37
Cds size1116
COG Functional cat.U
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348739.2476315-UTR-Ecto-sp6_S_contig102:556092..5563201682348739.2476315-UTR-Ecto-sp6_S_contig102:556092..556320Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig102 556093..556320 +
1682348739.263204-UTR-Ecto-sp6_S_contig102:557970..5580931682348739.263204-UTR-Ecto-sp6_S_contig102:557970..558093Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig102 557971..558093 +
1682348739.2718008-UTR-Ecto-sp6_S_contig102:558367..5585301682348739.2718008-UTR-Ecto-sp6_S_contig102:558367..558530Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig102 558368..558530 +
1682348739.2791219-UTR-Ecto-sp6_S_contig102:559296..5593821682348739.2791219-UTR-Ecto-sp6_S_contig102:559296..559382Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig102 559297..559382 +
1682348739.2866685-UTR-Ecto-sp6_S_contig102:559571..5595921682348739.2866685-UTR-Ecto-sp6_S_contig102:559571..559592Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig102 559572..559592 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348739.296017-CDS-Ecto-sp6_S_contig102:559592..5597461682348739.296017-CDS-Ecto-sp6_S_contig102:559592..559746Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 559593..559746 +
1682348739.3058143-CDS-Ecto-sp6_S_contig102:560218..5602541682348739.3058143-CDS-Ecto-sp6_S_contig102:560218..560254Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 560219..560254 +
1682348739.3150983-CDS-Ecto-sp6_S_contig102:561336..5614251682348739.3150983-CDS-Ecto-sp6_S_contig102:561336..561425Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 561337..561425 +
1682348739.3250709-CDS-Ecto-sp6_S_contig102:561909..5619781682348739.3250709-CDS-Ecto-sp6_S_contig102:561909..561978Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 561910..561978 +
1682348739.33439-CDS-Ecto-sp6_S_contig102:562208..5624451682348739.33439-CDS-Ecto-sp6_S_contig102:562208..562445Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 562209..562445 +
1682348739.345275-CDS-Ecto-sp6_S_contig102:562729..5627981682348739.345275-CDS-Ecto-sp6_S_contig102:562729..562798Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 562730..562798 +
1682348739.3528564-CDS-Ecto-sp6_S_contig102:564520..5647451682348739.3528564-CDS-Ecto-sp6_S_contig102:564520..564745Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 564521..564745 +
1682348739.3600023-CDS-Ecto-sp6_S_contig102:564942..5650041682348739.3600023-CDS-Ecto-sp6_S_contig102:564942..565004Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 564943..565004 +
1682348739.367416-CDS-Ecto-sp6_S_contig102:565402..5655771682348739.367416-CDS-Ecto-sp6_S_contig102:565402..565577Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 565403..565577 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.874.1prot_Ecto-sp6_S_contig102.874.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig102 559593..565577 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig102.874.1

>prot_Ecto-sp6_S_contig102.874.1 ID=prot_Ecto-sp6_S_contig102.874.1|Name=mRNA_Ecto-sp6_S_contig102.874.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=372bp
MEMLTNYEYTIDYTNDADGAAETWGNEAGHGIISASQMLAWVEENCSEAC
SASGSTPAPTPTIAQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCH
RESASYAYYAIQYGNECWCQDTDIDLRHGEATCDYACSGDASISCGGFYA
FTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADY
CANESPRNKYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFE
AFDLFEVIPLSPPTEDYYVGCFADDLADRVLEDMISAVDMTLEACENHCT
ERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQ
CGGSVAFSLYERDTCGKFEVL*
back to top

mRNA from alignment at Ecto-sp6_S_contig102:556093..565577+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.874.1 ID=mRNA_Ecto-sp6_S_contig102.874.1|Name=mRNA_Ecto-sp6_S_contig102.874.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9485bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:556093..565577+ (Ectocarpus species6 EcLAC_371)
GTGTCCTGGCCGGACTGTCACTGAAGTCGAGCGCATCACTTCGTGGACAA
GAGACTCCTTTTGGCAGTGAACAAAAGCAAACGTTGTGTCCGCTTTGCGT
TTCGTCCGGATGCAGGACTTCGAATGTGCGTCGGGATTTGAGCTAGTTTT
CACCGGTATTGGAGAGTGCGGCACGAGTGTCCCATCGCACGTGTTCCAAC
CCGACCTGGGCACGAACGATATCAACAGGTAAGTGTGCGATGAAGAATAA
ACGGCACACACCTCCTGGGAACGATACATGTCGAACTGGGCCGCAGTGGC
CGTGCGCTTTCGCTTCCTGTTGCTTGATAGCGATAGCATTTATCCTGTAA
CTTTGCCTCGTAAAAGCGCTGCGGAAACGTTGCTCCAGCCTCGCCCTTTG
TCTGTTATTAATCCGAGGGAGGTTGTCCGCGCAGCTCCACTTGGGTTCTG
ATTCTTCCTGTGTGCGTAATAAACATCCTTTTTGGAAGGATTGTGCGCGT
GTTCCTTTCCCTGCCTGCGGTCTTGCCCGACTGTTTTCTACTTTCTTCCC
AAAAATTGATTGCCATTCTCTAGGTATCTGCTTCCGTTGGACGCAGCCGC
GCCCCAGAATACGTTTTATGTGCACTGGGACGCTGACAGCGGGACCGACC
AAGACATCGTGATCGTCATATACTTCCAAGCGTTTGGCTCAAACACGTAT
TCCGCTCTCATGCACGGCGACGTCGTAAGTATGCCAATAGTCAGTGCACA
GCTGGTAGAGAATGTCCGACTGGTAAACCGTCGACGCTGCTTCGCTTCGC
GGCGTCCTACAGTTTAGATAACCCGAAGTTGTTTTGACGATCGGCTCCGC
GCTCAGTGAGAGAATGTATGAAGCTTCCGAAATTCCTATACCGATATCGA
CGGCGTCTCGGATCCCAGTTGGTGCTTGAAACTATCATACTCGGGACAAA
GCTGCGGTTCGAGGGGTATCCATACCCCTCTCAAGGTTACCATTCCCCCT
CGCAGATAGGGAGCTGGTTATCATGCCCACCTCCCTCCATGAAACTGCCC
CGGCTTTTGTTGGGTGGAAGGCGCAGTAGGCGTCCGAAGTCGATTTTGCG
GTAGGCGTTCCAAAAGCAGATCGTCACGAGTTATCGTTTGGACTACAATG
TTGCATCAGCCACCGATGTCGATGGCCGCTCATCAGTCTCCATCCCCCCT
TCATGGGCATCTCTGCGTGCTCCACACCACCAGGTTTCTGGAGGCTCTCC
GGTGGACTGGATTGATTTTTTCCCCTCCATCGTCGTAAGTTAACGGGGTG
GTTTTGATTGGCTTTAGTACTTGCTGTCGTCTTCCTGGCCGCCTATGGAC
TCGCACTTATCAAGCCTCCCTTTCCCCACCAACGTGTGGGTTTTGACTTT
TCTAAGAACGGCAGGCAAAACAAAGTAGTACGGGAATAGTACGTTTTACA
CTCTGTTATACTCTCCGTGTCTCACGTTTACCTGATCCTTTGCCCATTCC
CTCTTTCGTGCTGCTCACTGCCGCCTTCGACTGTAGGGCAATTTTTACCT
ACAAATTGTCCACTATGGCCCAACGGTAAGTCTCGCCTGGTTTGTGGTTG
GGACTCTCGTTCGGTCGGAGGTGCTGTGTTGCCGGGTTCCAATGCATAAT
CTTGGCCGTAATTGCTGCGTTTCTCAGCCCCAATGTGGTGGTTAACGGCG
GAAGTTCCCCCAAGTTGATTTCGTTCATGGACGGGCTACCCCTTCCGGCT
TGCTGCATGTGCATCATAGAGGCCTCCAGCAAAGCCGACCCCTGATAGGG
TTGGCATGAACATATTCGTGAGATCTGTGTCTCCAAGTATTGTATGCCGA
CGAATTATATTCGTTTCTCTATCATCAGGCGGCATACATTGACGCGGACT
TTCTCCTGCTATCTAGCGGCGGTATCGGAGGGCATACCGACGGAAACATC
TACGGTCACGCGTGTGCCAAGAACTGTGTCGCCGTCGCAGCCATCAATTG
GGTGAGAGCGCTTTCCCTCGACCCACAAGTAAATCAGCCGCGAAACATTT
CTGAATCACCAACATGAACGGTAGCAGATCAGAAATTAGACGGATGGGCT
CCCATTTTCTCTTAAACAGCCCCGCCGGACGCTCTGTTGGTATTTAGTAT
CAACACTGCAGTAAGCTCACTGGTGGGCAGCAAGATGTTCATCAAATGGC
ATATACACGGTGTTACTCATGTAATTAGTTTTTTCCACATAACCATGTCG
TACTTCGCGGTTTGGCATCTGGCAGCAAGAAGGAGATGGGCCTGCCGGCT
CTTTCGAGGACCCCGAAACCAGCAGAGTGGAGCATTTTTCATCCACGGGA
CCATGCATCGTAGACCCTGGCAGCGGGAAAGAGACCAGGGAAAAGCCGAC
AACTTGCGCTGCTGACGGCGCGGCGACATCGACAATCGGTGGGTGGTTTG
TAGTTTAGTTTTGCGTGCGCGCCACAAAAACTACCAGTACGATGTACACG
TTCAAGAGAATGAACTTCGGTAAAGATAACTGTCTACAAAGCACTTGGTT
TGCCCCAAGTGTTGAATAGATTAATGGGCTTGATTTTGACTTGTGTTGCG
TATTTTCCCAACGTATTTCCAGCCTAAAGGACGATGCGGTAGGGATAAAA
ATTAATTATGATGTAAAACTAAGACTTGAGTAACAACATGATCTCCCGCC
CTACCTAACGTGTGGTTAGGTCACAAAGATAACGGCGAGATTCTGCTGAT
CTCGAAAGCATCTCACCTGAACCTTTGCGACTTTGTGGGTGTGTACTTGG
CGTTGAAAACGTATTCTATCTGGCGACGCTGCATAGGTTTGCCTTCCCGA
GTTTCAAACGGCCCTTTTGCTATCTCGGGAATTTACTAACTAAAGTACCA
TTTTACGAATCTTGTGTGCGCGTGATCCTCCCTGTAACTGGCGCCAGTTT
ACACACCTTTCGGTTGTGAGTTAAACGTTTGACGTACAGCCCCCACCTTC
CACCTGTGGCTGTTGCCTCTATTTTTTTATCGCTGTGTGAGAGTCCACTG
GCTATCTGTCATGGGGGACTTAAGAGTCACGATTTCTCTCAACTTTTTCG
AATATCGCGTTGAGTGTACGTCGTCCACAGCGGTAAGGAGCAAACCTCCG
CACGCTGGCGCGCATCATGCCCTACTTCAATTTCCATCGGTTGTGACGTA
ACAGGATTCTCTGAATTCTTGGGCACTTCGGCGGCGGCACCGGTGGCGGC
GGCGATCGCGACCATCGTAAGGGCTGCATGCTTCCCAAGGGTGCGTCGAG
TCAGCAGTCTTTACCTTCCGACTAAGTTGATTGTTGTGTGTGATGTAAAG
AACATTGACATTCTACGTTGTGTAATAGCACTCGATTTATTTGGTGATAT
TTTTTTCTGGGTTTGGATCGAATTGTCGTAGAACGTGTCGTTGGTTTACA
CGGCATCCGCGCCGTGAACATCTCGACAGGTGGTGGAGTACGGAGAAATT
ATGGAGATGCTGACCAACTACGAGTACACAATCGACTACACTAATGACGC
CGATGGAGCTGCCGAGACATGGGGCAACGAAGCTGGACACGGGATTATTT
CCGCCTCGCAGATGCTCGCGTGGGTGGAGGAGAACTGTAGCGAGGCCTGC
TCAGGTAAACTGGCAAGAAAAGGAGTGGTGATAGTATCCGCCTACGGCGC
GACTGGTCCAGCGCACCCAATTATGAATCGATCGGGGCAGTTGATTGTGC
AGGCACGAAGAGTAACGCAGTATAAGAAGATGGTCAAGGGGCATGACAAG
CTGAGGCAGTACTTCTGAAAGATGAAGATCGGAAGGAAGACTGCCGGCGA
CAGGTGTAAGGCAAAACAAAGAAAAGTAACTAGAGGAAGCAGGTAGACAC
GACTCGAAAATGTATTGTATATGGACGAGGTAAGAGACCGAGCATCGACA
GTGTGGGTCGCGAGATCCAGGAACAAAGGAAAGGAATAAAAGGTAGAATG
GAGAGAAAGGAAGCCTTGCTATGCTTTGAGGAAGGGCAGCAAAACACCAC
GAGATATTCACGGGAGCATAGATTCGTCACTCTATAGAAACCTGCAGGCT
TTCCACGTAGACCATTCGACGGGGAGCATCCGGATCAACCCCGGCGCCAA
CACCTACCATTGGTGAGTTTAAACCAGGAAGGGTTTGGAGTTGAGACTCC
ACAGTGAGATCGTTACGGCCCTGCGCTTCCCGTGCACGAAGAAGAAACCG
CCGAAAGCTGTCCGAACGGAACTGAAATTAATCCAGGCAAAAAACGGCGC
CAGCCGCCAATGCCAAAACCTCTGCTGCAACTACACGTTCGACACGGCCA
GCCTAGTGCCCGGTTTGACCACATGGTGTTCTGGATGTAGCACGCCCTTG
CACCACAATGAAGGTCATCGTCTGGTCAACACAACACGCCCCACTCTCGT
TCATCATTTGCATGCAGCACAGATGGATACACGCCTGTTCCGACGCCGTC
ACCCACCAAGGCCCCTACCCCGGCCCCTACCGAGAGTTAGATTCGATTTT
TCTCTCGGTTGTTTTGAATGCTGTCGTTGTGTGTTCTGTCCTGTTCTGTA
CGAGTAGTCCACTCCACTGGTACCCGTATGGCCAAATAACGTTTTCGACA
TTGGCAAGACCAAAGGTCAAGAGGTGTTGGACGCGCCGCTGGTCTCGTCC
TCCGTTTGCCACGCTTATATATCAGATACGGCGGGACACACTCCGGTACC
GACTCCCGCCCCCACCACGATGAGTTTCAGTCAAGTTTTGCCTTTCGCAG
AATCGATCGTAGAAATGGTGACGTTCGCATTGTATGCATAGGACGGAGCG
ACAGGAACACCGGGAGCGTTCCGATACTAATGGCCACACCGAATTTCTTC
GGAGATTCCTTGTTCAGCTATCTCGGAGAATTAAGAGCTCTCGGCAAAGG
TGTAGAATTATATGCATCGAACCTCCTGAGTTCGAACGTTTTTCGCTGAA
ACACCACGCACCGCATATGGTTGAGGGCTCCTGCGTTAACCGAACGTGTT
TTTTGCGCTGTACGTGCCCAGCTCAACCGGGCTCCACGGCACAAGGATGA
TCCGTCCGACCGAGTGCTATATGCATCGAACCTCCTGAGTTCGAACGTTT
TTCGCTGAAACACCACGCACCGCCAAGTCTATGGTTGTAGGGCTACTCCT
GCGTCCTAACCCTGCGTGTTTCAATTTGCGCTGTACGTGCCCAGCTCAAC
CGGGCTCCCTCGGCTGTTACAAGGATGATCCGTCCGACCGAGTGCTGACG
GCAATGTGGTCGAGTCCCGTCATGACTCCTTCGGTAAGTACGCTAATCAC
GCCTGTCCGAGATGCCCCTACCAGAGCTTTGAGCAGCGGGCGACTTGGTT
GGCTGTGGCGGTGGCGACCCCGTCAACAATACCCTCGCGGCTGAACAATC
GAATAAAAGGCCGACGTGGATACGTACTTTTCGGTTCGCAAGAGACTGTG
CTGCACTGATTGCGATAGTTCATGTAGGTACACTATGCTACCATGCCGAA
CGGCGCCCTAGAAAGATCCAAAAATTGGCTTTCGGCCGAGAGTGTTTCGT
AGGGGTTGTCCGGCGGGTACTTCGGGGTAACAGGTAAACTTGGGTAAACC
ATTATCTATACACGACTGGGTTGGCTCTCAAGCTTCGTGAAGTGTCTTCA
CACGCACACAGCCAGTACCACCATTGAACACTTGCACTGGCCGACATGGA
GTATCTCCTTGATGTTGTTCACTCGCCTGCTCGTGTTGTCTCGGACGTTT
TACTCCCTTAAAACCAGGTCTGCGCCGCCTACTGCCACAGGGAGTCTGCC
AGCTATGCCTACTACGCAATACAGTACGGCAACGAGGTGGGTGTCGCCCC
ATCAGGGCTTCTTCGCCAGAACCCTCTTGGCCAGCTGGCGCCAATCCTGG
TTTGGTTTGCCTTATTTTTTAACCCTTGGTCCAGTTAGCACGACCACGCA
TAAAATGTCTTACTCGAGTCTCCATTTCCGATTACCTGTATCAGCACTTT
GCGTGATGGTCCTCGAGCTTAGCGTCCCGGAACCGGTGCCCATGGTGCTT
CGGCCCTTCGATGCAGTGTTGGTGCCAAGACACTGACATCGACCTCAGGC
ACGGAGAAGCCACATGCGACTACGCTTGCTCGGGGGATGCGTCGATTTCG
TGCGGTGGGTTCTACGCCTTTACCTTGTACGATCTCGAAGGAGCCAATCT
GCCCACTCCTCCTGCGGACGACAACTACGTGGGGTGCTTTGCGGACGACC
TGCAAGACCGCGTGCTTGGTGCCGAGACTTCATCCAGCTCTATGACCTCA
GAGGTGCCGGTATTCGTTTTCCAAAAGAAGTAACTGGCTATACAATCACG
CGCACACGCCACGGGAGTATTATTAATCCACCGCTGGTTGTTTTTGGAAC
TCTGGCACTCACAAAATATGTGATGCTTGTACTACCAGCACGTGTGGTGT
GCTTCCCCGACTACTGATACCTCGTATTGTAGTtagacTATGTTGAGCAC
GTGCATGCCATGCGTTGGACTCTCGTCTCAAACTCACCTAACCCTGATCC
CACTGTTTCCCCGACTCTACTGACTTCCTTTTTCAAGGCCTGTGCTGACT
ACTGCGCCAACGAGTCCCCCCGCAACAAGTACTACGCCACGCAATACGGC
GCACAGGTGTGTACGCAAACTGCGCTGTGTATGACATTCCTCACTTGAAC
GTAGAATTAGTTCTAGGTCGTGACCCAACGCGATAGCGTGGACATCTTTT
CCAGCTATTCTTTGCAACTCACCTCAGATCAAGTTTCACTTCGTATTTAT
TTTTCATACTGGAATTGCTTGTCGCAGAGCCACCCGTTTCTGGCTGATGG
GTTCGCCCCGTTTCTTATTTAGGTGTACGTGAATAGTAGCAAAGGCCACA
AGTGCTCACGATACTTATCCATCCCACGGTGGCCACGTACTTTCTCTCCG
CTTTGTCTCCGTCCAACCATATGGCGAAGGGGGTATACTCGACCCTTGCA
CTCTACGGGCCGTTTGAAGTGCTCCAAAATTGGTCCAAAGTTTATTTACC
CGACGTTCGACTCGACAAGTTCAAAGTTATTTTTCTTCGTGATGCTTAAA
TAGAATGATTTCTTTCTCCCGCATTCGTTGACGTGTTTGCGCGGAACAAA
ATTTTGCTCGAAACGACCAGTTCGGGGTTGTTTAAGTTCCTCCGAGGCCG
TTTTGCCTGAGTATTGCTTGAGATTTCGCCGTTTAGAAAAATTGAGAGCA
AAATTTGGAACGGCAGCTTGCGGCAGCGAACAGACACCGACCGCCTCGAA
CATACACACCCCGAGCACCTTTATAACGCACACATCCGAGGCCAACTGTC
AACAACTGTCGAGACCGCGCCGCACAACCTGCTCTGCTGTGGGCATCTAG
TCATGCGCGATGTGCTCCTGGCCGGTTGTTGTTGCGTGGGCCCAAGAATA
CCAACGGCTCGCTTCGGCTCGCTGAAAGATCGACACGGCGGCGATCATGA
TGAGCTTGCTGAACATACACACACATCTTACGTGAGAAGTACCGCAGTAG
TATATGCACATGTTACAGACCGCCAACAGGTGTGGGAGCTGACGGTCGCA
TCGCTCACGCCGTCGGACAAGCAGATCGAGAGACACCTCTGCGGGCGTGA
GGGTCTACTACTTCTGTGCGTTCGCACAGGACGCGATTGCCCGCGATCGT
GCTGTCAGCCTTCATGAATGTGTTGATGCGTCTAACTTACCACAAATGGC
AAACGGCTTGTTGATGTCGTTGCAATAAAGTAGAGACTGCTCACGCCGTG
GGAAGTTCGGCAGGCTTGAGATCACATTGCATGTGGCGGGTCAGATGTGC
GCCTGCCGCATCTATCTGTACCGCGCTATGTCTACGCTGTGATGTGTGTG
TGCTTGTTGATGCTCTCTGTGTGGCGGGCGATGTGCACATTTGGAACATG
TGCCTCTTGCCGAGGTACGTGGTCGCGTCCGTCCGCAATGTGCAATTCTA
CCTGCGCACGGTGGAAAGACTTTCATATCTAGGTTAAACTGACTGGCATC
AATACAGCAAATTTCGGTTCTTGCGCAAACACGTCATATTGTCCTTTCCC
AAGTTTCTGAGATCGCTCGTCACTAACACGTTTGACCGCGAAATCAACCT
TCACGATATTTGGAATTCGGTAAATACTTCCGGCGCTTCAAACGACCCAT
TATGTGTATGTTTGGCGCGGCTAAATCAAGAGACAAGATAGTGGTACATT
GTTCTCCTGTCGGTACTCTACGGACTCAGTAGCGGCCCCTAATATTGCTG
GCCTGCGACTCCGTAGCTAATTTTTGCTCCTGCCAAGCGTTAAACTGCTC
ACGGTCGATCTCTCGTTCCCTCTTAAAGTGTTGGTGCGCAGAAGAAGTCG
ACCTCAGGCACGGGGAGGGCAGGTGCGCCTACGCTTGCACCGGTGATGCC
AAAACCACATGCGGTGGCTTCGAGGCGTTTGATCTCTTTGAGGTCATCCC
GCTATCCCCGCCCACGGAAGACTACTATGTGGGATGCTTCGCGGACGACC
TAGCAGACCGCGTGCTCGAGGACATGATCTCCGCCGTAGACATGACCCTA
GAGGTAAACCAGTACTTGAAAGGCACCCGGACTGTGCAGTACTAGGTAGA
CGATATTCAACCTCAACCCCCCCTGTTCAATCAGAATACTCTGGGCTGAT
GAGGTGTCTGGCCAACAGTAAACACTGCCTGCGTGTGCCAAGGATTGACG
AAAAATGCTGACCCCCACTTCTCTGCCCCGTGTCTTGTTCGTCGCTGCAG
GCGTGCGAGAACCACTGCACGGAGAGGAACAAGCCTTTCTTCGCCCTTCA
GTATTCAGTAGAGTGAGTCCAAGATTATGCGAGGGAAGGTTGCGTATTAA
AACATGGCAAGATCGAGGTATCTTTAAAGCAACTGCTGTCAACATCCCGG
GAGGGTCTGGCCAGTGTGCAGTGGGTTGCATTAACCACACTTGGCCCAAC
CCCTCCTCCACGTGGTGCTATGACTCGAAATATACGTGACCAAAGTAAAA
TGACGAAGGCAAGCAACCATTAAGTACGCGACCCTCCTCCGTGGGAAAAC
CATGCCACACCCTACCTGCTCTACACCAACCCAATTTGACGTGCGCTAGT
AGAGACGATGCATGCATACCGTAGAAACTAAACATGGAATTGAGCTACCT
GCTACAGTTCCAAACAAACACTTCTTGTATTTGCCGCCTCGCACGCTCTT
TCTCCGACAGATGCTGGTGCGGTGGTTGCGAGATATTGGATGATGGACCC
GACAAGTACGACAGGCACGGCGCCGGCGTTTGCAACGACTTCCCATGCTC
AGGCGACCCAACTCGCCAGTGCGGGGGATCCGTTGCGTTCTCGCTGTACG
AGCGCGACACTTGCGGTAAGTTCGAAGTATTATAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:556093..565577+

>mRNA_Ecto-sp6_S_contig102.874.1 ID=mRNA_Ecto-sp6_S_contig102.874.1|Name=mRNA_Ecto-sp6_S_contig102.874.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1116bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:556093..565577+ (Ectocarpus species6 EcLAC_371)
ATGGAGATGCTGACCAACTACGAGTACACAATCGACTACACTAATGACGC
CGATGGAGCTGCCGAGACATGGGGCAACGAAGCTGGACACGGGATTATTT
CCGCCTCGCAGATGCTCGCGTGGGTGGAGGAGAACTGTAGCGAGGCCTGC
TCAGCATCCGGATCAACCCCGGCGCCAACACCTACCATTGCTCAACCGGG
CTCCCTCGGCTGTTACAAGGATGATCCGTCCGACCGAGTGCTGACGGCAA
TGTGGTCGAGTCCCGTCATGACTCCTTCGGTCTGCGCCGCCTACTGCCAC
AGGGAGTCTGCCAGCTATGCCTACTACGCAATACAGTACGGCAACGAGTG
TTGGTGCCAAGACACTGACATCGACCTCAGGCACGGAGAAGCCACATGCG
ACTACGCTTGCTCGGGGGATGCGTCGATTTCGTGCGGTGGGTTCTACGCC
TTTACCTTGTACGATCTCGAAGGAGCCAATCTGCCCACTCCTCCTGCGGA
CGACAACTACGTGGGGTGCTTTGCGGACGACCTGCAAGACCGCGTGCTTG
GTGCCGAGACTTCATCCAGCTCTATGACCTCAGAGGCCTGTGCTGACTAC
TGCGCCAACGAGTCCCCCCGCAACAAGTACTACGCCACGCAATACGGCGC
ACAGTGTTGGTGCGCAGAAGAAGTCGACCTCAGGCACGGGGAGGGCAGGT
GCGCCTACGCTTGCACCGGTGATGCCAAAACCACATGCGGTGGCTTCGAG
GCGTTTGATCTCTTTGAGGTCATCCCGCTATCCCCGCCCACGGAAGACTA
CTATGTGGGATGCTTCGCGGACGACCTAGCAGACCGCGTGCTCGAGGACA
TGATCTCCGCCGTAGACATGACCCTAGAGGCGTGCGAGAACCACTGCACG
GAGAGGAACAAGCCTTTCTTCGCCCTTCAGTATTCAGTAGAATGCTGGTG
CGGTGGTTGCGAGATATTGGATGATGGACCCGACAAGTACGACAGGCACG
GCGCCGGCGTTTGCAACGACTTCCCATGCTCAGGCGACCCAACTCGCCAG
TGCGGGGGATCCGTTGCGTTCTCGCTGTACGAGCGCGACACTTGCGGTAA
GTTCGAAGTATTATAA
back to top