Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 295 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-25_002630.1 |
| Cds size | 294 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682348735.2143905-CDS-Ecto-sp6_S_contig102:202077..202293 | 1682348735.2143905-CDS-Ecto-sp6_S_contig102:202077..202293 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig102 202078..202293 + |
| 1682348735.229723-CDS-Ecto-sp6_S_contig102:203053..203131 | 1682348735.229723-CDS-Ecto-sp6_S_contig102:203053..203131 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig102 203054..203131 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.846.1 >prot_Ecto-sp6_S_contig102.846.1 ID=prot_Ecto-sp6_S_contig102.846.1|Name=mRNA_Ecto-sp6_S_contig102.846.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=98bp
PAGSSTAAAANAPADGAAAASGAADAMPSSLSSPSPAGVRFLGGGSGSGR
RSRRAAMVEASVPPVHAGRQAENLADTESMLLVEFAGETGHGTGPTLE back to topmRNA from alignment at Ecto-sp6_S_contig102:202078..203131+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig102.846.1 ID=mRNA_Ecto-sp6_S_contig102.846.1|Name=mRNA_Ecto-sp6_S_contig102.846.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1054bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:202078..203131+ (Ectocarpus species6 EcLAC_371)
CCTGCCGGCAGTTCCACCGCCGCTGCCGCAAACGCACCCGCTGACGGTGC
TGCTGCTGCTTCCGGTGCTGCTGACGCTATGCCTTCTTCTTTGTCGTCTC
CTTCCCCTGCGGGAGTGCGGTTCTTGGGTGGTGGTTCGGGGTCGGGGAGA
AGAAGCCGGCGGGCGGCAATGGTTGAGGCGAGCGTTCCTCCTGTGCACGC
GGGACGTCAGGCGGAGGTGAGGTGGTGCCCTTGGCTGACCCTTGTTGTTG
TTTGTTGTTGTTGTGGTTGTGGGTGGTGTTGTTGTTTTTGGTGTAGCAGC
AGTAGTAGTAGCTGTTGTTGTTGTTGTTTCTGCTATTGGTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGCGGTGTTGTTTTCGTGGCTGTTTTGG
TTGGTCCTGTTGTTTTCTGTTGTTGTCGTTTCCATAGCTGTCGTTGTGAC
TGTTGGCTGTGTTTTGTGGCGGTGCTGCCATCATATGTCGTCGCCGCCGT
TGTTCTGCGTGTGGACGGCCGACGGAAAAATGTTGTCGGCCAACCCCCTC
TATTGCTTTGCTCGTTGGATGGGCAATGCTCTTTTCGTGGGGGAAGCCAA
GGCAGCACTTTTTTCCTCGGTCGCACCACAACCGCTAACCTTGGTGCCAC
TCAATGCCTTACTGCTGCGACGGTACCCGCGCTGTCGAGAGCCTCCGTTG
TGATGCTTGATTTCGTGCACTCCTCTGCCTGCGACGAAGGTGCTGAAGGC
TAGAATACGCCCGATCCGTTCGCCATTCCGCCATTGCTCCCTCTTTGCGA
CCATCAAAGGCGAAACGCCTGATTGCCTTTTTATGGCGACATCGGCAAGT
ACCGTGTTTGTTTTACCGCCTTGATAACCATGTACTTGAAAATGCAGAAC
CTCGTCCGTGCTGAGGCTCTTTTTTTTTGTTTTCTTTTCGGTCTTTCTGG
CGCGATTACTATGCTCAAAATTGCAGAACCTCGCCGATACGGAGTCTATG
CTGTTGGTGGAGTTTGCGGGAGAGACTGGGCACGGGACTGGACCAACACT
CGAG back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig102:202078..203131+ >mRNA_Ecto-sp6_S_contig102.846.1 ID=mRNA_Ecto-sp6_S_contig102.846.1|Name=mRNA_Ecto-sp6_S_contig102.846.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=294bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:202078..203131+ (Ectocarpus species6 EcLAC_371)
CCTGCCGGCAGTTCCACCGCCGCTGCCGCAAACGCACCCGCTGACGGTGC
TGCTGCTGCTTCCGGTGCTGCTGACGCTATGCCTTCTTCTTTGTCGTCTC
CTTCCCCTGCGGGAGTGCGGTTCTTGGGTGGTGGTTCGGGGTCGGGGAGA
AGAAGCCGGCGGGCGGCAATGGTTGAGGCGAGCGTTCCTCCTGTGCACGC
GGGACGTCAGGCGGAGAACCTCGCCGATACGGAGTCTATGCTGTTGGTGG
AGTTTGCGGGAGAGACTGGGCACGGGACTGGACCAACACTCGAG back to top
|