Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 249 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-13_002730.1 |
| Cds size | 249 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682348735.9672303-CDS-Ecto-sp6_S_contig102:75587..75675 | 1682348735.9672303-CDS-Ecto-sp6_S_contig102:75587..75675 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig102 75588..75675 - |
| 1682348735.978142-CDS-Ecto-sp6_S_contig102:76440..76601 | 1682348735.978142-CDS-Ecto-sp6_S_contig102:76440..76601 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig102 76441..76601 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.832.1 >prot_Ecto-sp6_S_contig102.832.1 ID=prot_Ecto-sp6_S_contig102.832.1|Name=mRNA_Ecto-sp6_S_contig102.832.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=83bp
MQSTLNPPSHFKTKDWFSSALYVTRPPPAPASCDIPYLPRRRTAGRSYPR
ADIRKEPAQRCSWVFVTWNHRKFIAAHSTAHV* back to topmRNA from alignment at Ecto-sp6_S_contig102:75588..76601- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig102.832.1 ID=mRNA_Ecto-sp6_S_contig102.832.1|Name=mRNA_Ecto-sp6_S_contig102.832.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1014bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:75588..76601- (Ectocarpus species6 EcLAC_371)
ATGCAGTCAACACTCAATCCGCCGTCACATTTCAAGACAAAAGACTGGTT
CTCTTCAGCACTGTACGTCACGCGGCCTCCTCCTGCGCCCGCATCGTGCG
ACATACCATACCTACCACGACGTCGGACTGCTGGGCGCTCCTATCCCCGT
GCTGACATCAGGTGAGATTTTGGGAGAGGAAGTTGGCGCACACCCGGTGC
TTATGATCTGCGTGCACTTAGCAGAGGCCACAGAGAGCAGGTTACGCTGT
GTATGTCCGCCCTGGGTCGAGGTGAAGGTTGTCTGAAAGCGGGAGGAGGG
CAAACTCGCTGGACACATCGTGGCTCGAGCAGCATGCCTGGTTTGGGACG
ATGCAGTTCGATGGAGCATCGTTAATTTTTTTCCACATAGCGGCATGATC
AATGATCAACATCACACAATACCAGCACATATGTATCCGACCGCTCGCTA
CCACTGTTGTTGCTAAAGTTGCGCACTTGAATGAGTTCCACAAAGTCTTC
TTCACATACTACCAGCACCAAATCGAAGTCTGCAACACACAAAAGAATGC
CCCCCACAACCTCGTTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCCAA
AGTGTCGTTCAGACAGCATTCATTCGCAAAACCCACGTCGTGAACGTTTG
GTGGCCGGCATTGTCTGGGATATCCTCCGTATAGATATGACTTTTTCATG
CACCGTGTTGGCGCTCAGCAAACAACGGAAGGCCTCGTTGCGAATGGGTT
GCTATCATTGACGACTTGGTCGCCGCATATTCATTCTGTAAATCAACACG
GTTTAGTTATTCTCTGACAAAAACGTTTCTCTTGAATGAAATGCTGGATG
TCTTTTCCAATGCCTGTGCTGCGTTATTGGTCATTGACACCACCACCACG
AAATACCACCCCACCCATTGTGTCAGGAAAGAGCCAGCACAAAGGTGCAG
CTGGGTCTTTGTCACGTGGAATCATCGGAAATTTATTGCAGCACATAGCA
CAGCACATGTTTGA back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig102:75588..76601- >mRNA_Ecto-sp6_S_contig102.832.1 ID=mRNA_Ecto-sp6_S_contig102.832.1|Name=mRNA_Ecto-sp6_S_contig102.832.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=249bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:75588..76601- (Ectocarpus species6 EcLAC_371)
ATGCAGTCAACACTCAATCCGCCGTCACATTTCAAGACAAAAGACTGGTT
CTCTTCAGCACTGTACGTCACGCGGCCTCCTCCTGCGCCCGCATCGTGCG
ACATACCATACCTACCACGACGTCGGACTGCTGGGCGCTCCTATCCCCGT
GCTGACATCAGGAAAGAGCCAGCACAAAGGTGCAGCTGGGTCTTTGTCAC
GTGGAATCATCGGAAATTTATTGCAGCACATAGCACAGCACATGTTTGA back to top
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