Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 168 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 168 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682348734.7042313-CDS-Ecto-sp6_S_contig101:560396..560452 | 1682348734.7042313-CDS-Ecto-sp6_S_contig101:560396..560452 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig101 560397..560452 + |
| 1682348734.7145107-CDS-Ecto-sp6_S_contig101:561228..561340 | 1682348734.7145107-CDS-Ecto-sp6_S_contig101:561228..561340 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig101 561229..561340 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.821.1 >prot_Ecto-sp6_S_contig101.821.1 ID=prot_Ecto-sp6_S_contig101.821.1|Name=mRNA_Ecto-sp6_S_contig101.821.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=56bp
MQASSEHLGAITAGGGLMRQEKQTSHSALVTDFWTVEKTRTYSPPFLVVS
AKRRL* back to topmRNA from alignment at Ecto-sp6_S_contig101:560397..561340+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig101.821.1 ID=mRNA_Ecto-sp6_S_contig101.821.1|Name=mRNA_Ecto-sp6_S_contig101.821.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=944bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:560397..561340+ (Ectocarpus species6 EcLAC_371)
ATGCAGGCCTCGTCGGAACACCTGGGAGCTATCACAGCCGGCGGGGGGTT
GATGAGGTGAGCCAAAAAGATACCTCTTGCCAGAGCTCTCAGAATTGGGT
GTGATTTCTCACCATCAGCTTTGAAAGTATGACGGCGAAGGCACACCATC
ACCACAGCATTGTTGCCGACTTGCTGTCCTTCGGTGGGGAAGGGTGTGCG
TTGGGCGCGCGGCGAGGGCATACAGTATAACTCATCCGGTCTCAAGATCT
CGAGAACCAAAGAGAGCCGTAGGAAGAGAAAAAGTTGCTCCATCTTGCTC
CATCGGCAAAGAACTTTACAGCAGGAGAGGAGGAGCGATGGCGCTATATT
GCTGTACCGCCGTAGCTGTTCTGCACCGCCATCCGTACTACATTAGACAA
AGAGAGCAAAAGAAGGGATTCTTGGCCACTTCGCACCGTGCAGAGTCAGC
CTTGTTATCGGTGCGGTGAAAGAGCGGCCGTGTATGGATACAACGGAAGG
TGCTCCAAGAAGAGGATGCTGACAAAAAAAAGCACACACACCAGCAGCTT
TGTGTGCGACTGCTGTTGAATCAAATGAACCTCCGGCGATCGATCTGGTC
TTGTCAGCCCCCCGAGTACAGCAGTAGCAATGCATTCAATCCTCCGCCGT
GATGCTCCGTGATGCTGTCCGTTGGTAAATAGCAGCACCATGCCTCTGTT
TTTCTCTCTCCACCAATTCCACCGAACGGGGGTCGATGTCAGGCTCTCCC
ACCGAACTCCACGCTCTGCTTTGCTGCCCGATTCCCCTTTTTGCAGCCCT
CCACACTCCACACCTCCTCGCGGACGATCCAGGCAAGAAAAGCAAACAAG
TCATTCGGCCCTGGTGACTGACTTCTGGACCGTGGAAAAAACGAGGACAT
ACAGCCCGCCGTTCCTTGTGGTAAGCGCCAAGCGGCGTCTCTAG back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig101:560397..561340+ >mRNA_Ecto-sp6_S_contig101.821.1 ID=mRNA_Ecto-sp6_S_contig101.821.1|Name=mRNA_Ecto-sp6_S_contig101.821.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=168bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:560397..561340+ (Ectocarpus species6 EcLAC_371)
ATGCAGGCCTCGTCGGAACACCTGGGAGCTATCACAGCCGGCGGGGGGTT
GATGAGGCAAGAAAAGCAAACAAGTCATTCGGCCCTGGTGACTGACTTCT
GGACCGTGGAAAAAACGAGGACATACAGCCCGCCGTTCCTTGTGGTAAGC
GCCAAGCGGCGTCTCTAG back to top
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