Homology
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
D8LMZ4_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMZ4_ECTSI)
HSP 1 Score: 227 bits (578), Expect = 3.740e-71
Identity = 168/177 (94.92%), Postives = 171/177 (96.61%), Query Frame = 1
Query: 247 MVIARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFELPALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTEVHVDGNSGLSSSDRVVEALQHRPKTTVVLGDAGDYSRRRQEDPLTSSVDR 777
MVIARSLKDAARLGSATTSLLLR+SEDLVCQNLMCAKIGEACVCRLAVHLSRLGKL+ELDVAENDLGVLPEPVFELPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTEVHVDGNSGL SSDRVVEALQHRP+TTVV GDAGDYSRRRQED TSS DR
Sbjct: 1 MVIARSLKDAARLGSATTSLLLRRSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLKELDVAENDLGVLPEPVFELPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTEVHVDGNSGLGSSDRVVEALQHRPQTTVVFGDAGDYSRRRQEDASTSSADR 177
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
A0A1V9ZV51_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZV51_9STRA)
HSP 1 Score: 91.7 bits (226), Expect = 5.030e-19
Identity = 44/78 (56.41%), Postives = 61/78 (78.21%), Query Frame = 1
Query: 250 VIARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFELPAL 483
+IA+SL+DAA S+ L+LRKS+DLVC+NLMC ++GEACVC+L++ L RL +L ELDV+EN L +LP +F+L L
Sbjct: 1 MIAKSLRDAATHTSSVQKLVLRKSQDLVCRNLMCERVGEACVCKLSLVLERLPQLEELDVSENKLQMLPPSIFQLSKL 78
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
T0QH27_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QH27_SAPDV)
HSP 1 Score: 88.2 bits (217), Expect = 1.100e-17
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 250 VIARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFEL 474
+IA+SL+DAA SA L+LRKSEDL+C NLMC ++GEACVC+L+V L RL +L LDV+ N+L LP +F L
Sbjct: 1 MIAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLKSLPPAIFSL 75
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
A0A1V9Z9Y8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9Y8_9STRA)
HSP 1 Score: 85.9 bits (211), Expect = 6.650e-17
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 250 VIARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFEL 474
+IA+SL++AA +A LLLRKSEDLVC+NLMC ++GEACVC+L++ L RL +L LDV+ N LG LP V L
Sbjct: 1 MIAKSLREAATHTTAVRKLLLRKSEDLVCRNLMCERVGEACVCKLSLVLERLPELTHLDVSGNKLGALPPAVAAL 75
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
A0A067CF62_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CF62_SAPPC)
HSP 1 Score: 87.8 bits (216), Expect = 1.240e-15
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 250 VIARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFEL 474
+IA+SL+DAA SA L+LRKSEDL+C NLMC ++GEACVC+L+V L RL +L LDV+ N+L LP +F L
Sbjct: 382 MIAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLMSLPPAIFSL 456
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
A0A024GQG6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GQG6_9STRA)
HSP 1 Score: 80.5 bits (197), Expect = 3.220e-15
Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 253 IARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFEL 474
+A S + AA+ G+AT L+L KS+DLVC+NLMC +IG AC CRLA L+ + KL LD++ N+L +P+ VF L
Sbjct: 5 VATSFRQAAKSGAATRELILNKSQDLVCKNLMCERIGGACACRLAHILTCVPKLTHLDLSNNELETIPDAVFSL 78
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
A0A485L6B7_9STRA (Aste57867_16664 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6B7_9STRA)
HSP 1 Score: 86.3 bits (212), Expect = 3.640e-15
Identity = 40/78 (51.28%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 250 VIARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFELPAL 483
+I RS++DAA A LLLR+SEDL+C+NLMC ++GEAC+CR ++ L +L +L +LDV+ N+L LP +F+LP L
Sbjct: 332 MIVRSVRDAAMHMGAVKELLLRRSEDLLCRNLMCERVGEACICRFSLVLEKLPQLTKLDVSHNNLHALPPALFQLPRL 409
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
A0A484E5V5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5V5_BRELC)
HSP 1 Score: 80.5 bits (197), Expect = 9.670e-15
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 253 IARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFELPAL 483
IA L+D AR GS T L L KS DLVC+ LMC +G+AC CRLA+ L R+ LR LD++ N L +LP+ V+ L +L
Sbjct: 6 IATCLRDVARHGSCITELQLSKSSDLVCRQLMCEHVGDACSCRLALALERVPHLRHLDLSRNQLRMLPDAVYALQSL 82
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
A0A662YEN8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEN8_9STRA)
HSP 1 Score: 80.9 bits (198), Expect = 1.570e-14
Identity = 37/74 (50.00%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 253 IARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFEL 474
+ARS +D AR+G+A +SL L +S DLVC+NLMC +G+AC CRL++ L R+ +L++LD++ N L LP F L
Sbjct: 36 VARSFRDVARVGAAVSSLQLPQSPDLVCRNLMCEHVGDACACRLSLVLERVPQLQQLDLSSNALRALPASTFSL 109
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Match:
F0WI42_9STRA (Uncharacterized protein AlNc14C107G6249 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WI42_9STRA)
HSP 1 Score: 78.6 bits (192), Expect = 1.750e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 253 IARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLRELDVAENDLGVLPEPVFEL 474
+A S +D A+ G+ L+L+KS+DLVC+NLMC KIG AC CRLA L+ + KL LD++ N L +PE VF L
Sbjct: 5 VATSFRDVAKNGATIKKLILKKSQDLVCKNLMCEKIGGACACRLAHILTCVPKLTHLDLSNNSLETIPEAVFGL 78
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.815.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.74e-71 / Id = 94.92 Expect = 5.03e-19 / Id = 56.41 Expect = 1.10e-17 / Id = 57.33 Expect = 6.65e-17 / Id = 57.33 Expect = 1.24e-15 / Id = 57.33 Expect = 3.22e-15 / Id = 51.35 Expect = 3.64e-15 / Id = 51.28 Expect = 9.67e-15 / Id = 51.95 Expect = 1.57e-14 / Id = 50.00 Expect = 1.75e-14 / Id = 51.35 Sequence D8LMZ4_ECTSI A0A1V9ZV51_9STRA T0QH27_SAPDV A0A1V9Z9Y8_9STRA A0A067CF62_SAPPC A0A024GQG6_9STRA A0A485L6B7_9STRA A0A484E5V5_BRELC A0A662YEN8_9STRA F0WI42_9STRA Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.815.1
>prot_Ecto-sp6_S_contig101.815.1 ID=prot_Ecto-sp6_S_contig101.815.1|Name=mRNA_Ecto-sp6_S_contig101.815.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=178bp
MVIARSLKDAARLGSATTSLLLRKSEDLVCQNLMCAKIGEACVCRLAVHL back to top mRNA from alignment at Ecto-sp6_S_contig101:501127..502543-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig101.815.1 ID=mRNA_Ecto-sp6_S_contig101.815.1|Name=mRNA_Ecto-sp6_S_contig101.815.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1417bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:501127..502543- (Ectocarpus species6 EcLAC_371)CCCTATTACTCTTTTTTAGAAAGTAAACATTTTTTACTCTATTGTACAAA
TGCCCCCCTCTGTCTGTGCTCACGTTCTCACCAATCGGGTGTGTGGCGTT
CAACATTACCCCCGCTGCTGCGAAAAATGGCTATAGTCACGGGACCAGGG
GTCAATGGGGCTGACGGATCAGGTCTGTCTGTCTCCCGCACTTCTCTGTC
GCTGTCTACACGCAGGAGTTGCAAGTATCTCTCTCCCTAGTGGGCA ATGG
TTATCGCGCGGAGTCTCAAGGACGCGGCGCGGCTAGGGAGCGCGACGACC
TCTCTGTTGCTGAGGAAGAGCGAGGACCTGGTATGCCAGAACCTCATGTG
CGCCAAGATAGGCGAGGCTTGCGTCTGTCGGCTGGCCGTCCACTTGTCCC
GGCTGGGCAAGCTGAGGGAGCTCGACGTTGCTGAGAACGACCTCGGCGTC
CTGCCCGAACCAGTGTTCGAGTTGCCGGCCTTGGAGCATCTGGACGTCAG
TG GTGAGTGCTGATTTTTGCCTTGAGTGTTGGCGATGTTGATGGTGCATG
GGCTTGTGTTGTTGGCGTATATCTCCCAGACCTGCAATGTGCTTTCTCTG
ATGTTTTCTGCTGCTGTCGCAACAGCGAACCCCACACGAGAGTGCAGTTG
AAGGAGTGTGTCCGCCCCTCTGCGGAAAGCAACCATCCGTCATGAGACTT
TCCGGCGGACTAATGCAAACCGGCTGGGTGTTTCCATCCACTGGATTATC
CGCTGACGGGGGCAAATCATGTCGGCAGCCCGAGAGAGAAGGGAAGGGTG
GGGGTTTCCCCACGGTAATCAAATCGAGGTGTACTCTGCACGCCCGTACA
AATAGGTCTGCTTTAGCCAACCCCGTTGCCGCTGCTCTTGGGGTTGTCCG
CTCCTTTTCACAATCACCGTCGACCTTAACCCCTCCCGCCTCGAACCTTT
CCGGGGCTCTCCTGCTATCGCGGTTAACAGGGAACGGTCTCAAAGACCTG
CCGGCGAGCGTAGCCGCTCTCTCCAGCCTTCGTACTCTCCGGCTGTCGGA
CAACGCCCTCACGGCCCTGCCGAAAGAGCTGGCCTTGCTCCCGTTGCTGA
CAGAGGTGCACGTAGACGGCAACAGCGGGCTTAGCAGCAGCGACAGAGTG
GTCGAGGCGTTGCAGCACAGACCAAAAACGACCGTCGTTCTCGGCGACGC
AGGAGATTACTCTCGAAGACGTCAAGAGGACCCTTTGACCTCCTCGGTGG
ATAGATAG CGGCGGCCCCGGACACGAGAAATCTCGTTGTCCCTCGAAGGG
AAATGGTTTCTGGTTTTGGTTATGGGCTGATCCGAGGAAGCCTTTCCATC
GCTTTAGATGCCCTGGTACAAGTCTACGGTGATTCGTTGTTCCCGATTTT
CATAAGTTTTGAAGGGC back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:501127..502543-
>mRNA_Ecto-sp6_S_contig101.815.1 ID=mRNA_Ecto-sp6_S_contig101.815.1|Name=mRNA_Ecto-sp6_S_contig101.815.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=534bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:501127..502543- (Ectocarpus species6 EcLAC_371) back to top