mRNA_Ecto-sp6_S_contig101.801.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: D7FPN4_ECTSI (acidPPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN4_ECTSI) HSP 1 Score: 801 bits (2068), Expect = 5.230e-291 Identity = 443/456 (97.15%), Postives = 447/456 (98.03%), Query Frame = 1 Query: 1 EEGGVVGDGKGGGRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPKRRRRQPWLRGLFTVFLVVEALVLYAVNEYSPVYDFEVLSVTTTAEDGTTTVVGDNPDLSFPLSLAGEKCGVSDMAACVTEEPTAAALSTVCCTELLDPDSAGPDELISSVVAFCYVVVIPGLILLVRGLLLGRMWTLRPTRGLPCLTRDQSKAAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFHFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRGARLKEGGSRTGASSSAGGDVAKGPSLQAVPPARVAEADDSARKLDLYA 1368
++GGVVGDGKGGGRDAXXXXXXXXXXXXXXXXXXXXXXXXXXX RPKRRRRQPWLRGLFTVFLVVEALVLYAVNEYSPVYDFEVLSVTTTAEDGTTTVVGDNPDLSFPLSLAGEKCGVSDMAACVTEEPT AALSTVCCTELLDPDSAGPDELISSVVAFCYVVVIPGLILLVRGLLLGRMWTLRPTRGLPCLTRDQSKAAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAK T G + NYYALLFYTEHTLNGQD+HHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFHFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRR ARLKEGGSRTGASSSAGGDVAKGPSLQAVPPARVAEADDSARKLDLYA
Sbjct: 2 KKGGVVGDGKGGGRDAXXXXXXXXXXXXXXXXXXXXXXXXXXX--RPKRRRRQPWLRGLFTVFLVVEALVLYAVNEYSPVYDFEVLSVTTTAEDGTTTVVGDNPDLSFPLSLAGEKCGVSDMAACVTEEPTPAALSTVCCTELLDPDSAGPDELISSVVAFCYVVVIPGLILLVRGLLLGRMWTLRPTRGLPCLTRDQSKAAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKGTGGGAKTNYYALLFYTEHTLNGQDYHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFHFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRRARLKEGGSRTGASSSAGGDVAKGPSLQAVPPARVAEADDSARKLDLYA 455
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: A0A6H5JPR8_9PHAE (acidPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPR8_9PHAE) HSP 1 Score: 688 bits (1776), Expect = 4.250e-248 Identity = 345/358 (96.37%), Postives = 351/358 (98.04%), Query Frame = 1 Query: 295 VVGDNPDLSFPLSLAGEKCGVSDMAACVTEEPTAAALSTVCCTELLDPDSAGPDELISSVVAFCYVVVIPGLILLVRGLLLGRMWTLRPTRGLPCLTRDQSKAAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFHFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRGARLKEGGSRTGASSSAGGDVAKGPSLQAVPPARVAEADDSARKLDLYA 1368
V+GDNPDLSFPLSLAGEKCGVSDMAACVTEEPTAAALSTVCCTELLDPDSAGPDELISS+VAFC+VVVIPGLILLVRGLLLGRMWT+RPTRGLPCLTR QSK AWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDF HWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAIL+GV+RIREYWHRPDDVLVGFIMGFAAAHWAF FAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRR ARLKEGG RTG SSSAGGDVAKGPSLQAVPPARVAEADDSARKLDLYA
Sbjct: 2 VIGDNPDLSFPLSLAGEKCGVSDMAACVTEEPTAAALSTVCCTELLDPDSAGPDELISSIVAFCFVVVIPGLILLVRGLLLGRMWTIRPTRGLPCLTRAQSKTAWGKKRWHLRVGFFALDAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDFQHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAILVGVSRIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHEIGSPEWKMNPKWLDEEEQRWEEEDEELRLCGWRRRRARLKEGGPRTGTSSSAGGDVAKGPSLQAVPPARVAEADDSARKLDLYA 359
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: A0A836CC24_9STRA (acidPPc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC24_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.900e-13 Identity = 55/141 (39.01%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 565 RGLPCLTRDQSKAAWGKKRWHLRVGFFAL---------DAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDFHHWSI----TSWPSGHAATAMSGLVFLAYVLWSDL-VALVMWRRRAHPRLSLVLVM 945
RG P D + K WH V F DA++GL A++ ASL + + K+ VGRPRPNYYAL ++ EH++ Q H + TSW SGH++ +++G++FL VLW D+ V LV W R L LV M
Sbjct: 307 RGRPAAAADGANGN-SKPDWHTLVCFSRRVRLSADAHWDAWIGLLASLAMASLMTELTKLLVGRPRPNYYALKYFGEHSVVDQGSIHDATRSANTSWVSGHSSLSLAGVLFLTLVLWRDVSVWLVRWGRPHRSWLPLVTAM 446
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: A0A835ZFV7_9STRA (Phosphatidic acid phosphatase type 2/haloperoxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV7_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.640e-11 Identity = 52/141 (36.88%), Postives = 67/141 (47.52%), Query Frame = 1 Query: 673 AAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHT----------LNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALV--MWRRRAHPRLSLVLVMLGGFVVALLPMSAILIGVTRIREYWHRPDDVLVGFIMG 1059
A V A+LF K VGRPRPNY AL+ + L G TS+PS H++ AM+ F A V+W D V +W R L G V L AI +G+TRI++YWH PDDV G+ +G
Sbjct: 2 ACVSIATLF---IKKGVGRPRPNYAALVEVVAQSPALAAGSAGALGGHPR-----TSFPSAHSSHAMAAFGFFALVVWGDAARRVGPLWARN-----------LAGMVALLSMACAIWVGMTRIQDYWHHPDDVFAGWALG 123
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: A0A2S6CGW1_9PEZI (acidPPc domain-containing protein n=5 Tax=Cercospora TaxID=29002 RepID=A0A2S6CGW1_9PEZI) HSP 1 Score: 69.3 bits (168), Expect = 2.140e-9 Identity = 55/163 (33.74%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 658 FLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQDF---------HHWSITSW---PSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPM-SAILIGVTRIREYWHRPDDVLVGFIMGFAAAH--WAFHFAVLL 1101
FLGLF+A++ A++ + + K +GRPRP+ A E T + HH W PSGH++ A SGL ++A ++ S L L PR SL++V+ LLP+ A LI V+R+ +Y H DV+ G I+GFA + W ++ L+
Sbjct: 109 FLGLFSAILMATMITDILKDAIGRPRPDLIARCKPAEGTPRNEMISVEVCTETNHHVLHDGWRSYPSGHSSFAFSGLGWIALLMASQLHVL-------RPRASLIVVL-----ACLLPLLGAALIAVSRLEDYRHDVFDVVSGSILGFAVTYFNWRRYYPSLM 259
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: A2DYB5_TRIVA (PAP2 superfamily protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DYB5_TRIVA) HSP 1 Score: 67.8 bits (164), Expect = 4.840e-9 Identity = 54/148 (36.49%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 658 FLGLFAAVVTASLFS-TVAKVTVGRPRPNYYALLFYTEHT---------LNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAA 1071
FL F A S F+ ++ K VGR RP+ Y++ E L+ +F SWPSGH+ TAMSG V +A+ + +R +LV G F +L + AI G TRIR+Y HRPDDVL GF +G+ A
Sbjct: 98 FLWAFVAAEGISGFTVSIFKNYVGRTRPDLYSICGSQEINPSDPSTCPGLSASEFKD-QFRSWPSGHSQTAMSGFVIIAFFV-----------QRIIKSKNLV----GTFCGSLFIILAIWCGATRIRDYKHRPDDVLAGFFVGYIFA 229
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: A0A2I0JX14_PUNGR (acidPPc domain-containing protein n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JX14_PUNGR) HSP 1 Score: 65.9 bits (159), Expect = 1.860e-8 Identity = 49/172 (28.49%), Postives = 80/172 (46.51%), Query Frame = 1 Query: 655 AFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLF----------------YTEHTLNGQDFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLP-MSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFHFAVLLPFRHEI 1119
A LGL AV ++ + KV VGRPRPN++ F Y + + + + S+PSGH + + +GLVFL++ + + A + H + + LP ++AIL+GV+R+ +YWH DV G I+G + F + PF H++
Sbjct: 99 ATLGLLYAVGLTAVITDAIKVAVGRPRPNFFYRCFPDGEPVFDNVTHDVLCYGDKAVIKEGY-----KSFPSGHTSWSFAGLVFLSWYMSGKIRA---FNHGGH---------VAKLCIVFLPVLAAILVGVSRVDDYWHHWQDVFTGAIIGTVLS--TFCYLQFFPFPHDV 251
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: A0A7S2GK46_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GK46_9EUKA) HSP 1 Score: 65.1 bits (157), Expect = 3.670e-8 Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 652 DAFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLFYTEHTLNGQ-DFHHWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFH 1086
D LGL ++ A F + K VGR RP++ A + G + S+PSGH+A + +GL F+ V+ + L H R ++ G + AL + A+ I ++RI++YWH DVLVG ++G AA +FH
Sbjct: 92 DLLLGLAGSIAFAFAFVCIVKAAVGRLRPDFLARCLPVDGKCTGDPEAIAEGRRSFPSGHSAFSFAGLGFVTLVIAAHL----------HQRTPAAGMIWKGCLAALPWLLALHIALSRIQDYWHHWQDVLVGTVIGHIAAIGSFH 227
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: A0A2C9WGV2_MANES (acidPPc domain-containing protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9WGV2_MANES) HSP 1 Score: 64.7 bits (156), Expect = 7.540e-8 Identity = 49/166 (29.52%), Postives = 80/166 (48.19%), Query Frame = 1 Query: 655 AFLGLFAAVVTASLFSTVAKVTVGRPRPNYYALLF---------YTEHTLNGQDFH--HWSITSWPSGHAATAMSGLVFLAYVLWSDLVALVMWRRRAHPRLSLVLVMLGGFVVALLP-MSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFHFAVLLPFRHE 1116
A LGL +++ + + K VGRPRPN++ F T + D H S+PSGH++ + +GL FLA+ + L ++ RR H + + L+P + AIL+G++R+ +YWH DV G ++G A AF + P+ +E
Sbjct: 99 AILGLLFSLLATGVITDAIKDAVGRPRPNFFWRCFPDGKAAFDPVTYDVICHGDAHIIKEGYKSFPSGHSSWSFAGLTFLAWYMSGKL---RVFDRRGH---------VAKLCIVLIPVLIAILVGISRVDDYWHHWTDVFAGALIGTIVA--AFCYLQFFPYPYE 250
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Match: A0A556V991_BAGYA (Phospholipid phosphatase 3 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556V991_BAGYA) HSP 1 Score: 62.0 bits (149), Expect = 8.450e-8 Identity = 51/146 (34.93%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 706 VAKVTVGRPRPNYYALLFYTEHTLN---GQDFHHWSITS-----------WPSGHAATAMSGLVFLAYVLWSDLVALVMWR--RRAHPRLSLVLVMLGGFVVALLPMSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHW-AFHFA 1092
+AK++VGR RPN+ A+ T +LN G+ + +S + SGHA+ AM +++LA+ L A WR R P L +LVML + G+TRI +Y H P DVL GF+ G A+W AFH +
Sbjct: 1 MAKLSVGRLRPNFLAVCNVTYESLNCTLGEYIDNVKCSSSRKEEEEARKSFFSGHASFAMYTMLYLAFYLQ----ARFSWRGARLLRPLLQFLLVMLAVYT-----------GLTRISDYRHHPSDVLTGFLQGGITAYWVAFHIS 131 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.801.1 >prot_Ecto-sp6_S_contig101.801.1 ID=prot_Ecto-sp6_S_contig101.801.1|Name=mRNA_Ecto-sp6_S_contig101.801.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=457bp EEGGVVGDGKGGGRDAAAAAAAAAAAGANGGASGAEDSDSSRGSTRPKRRback to top mRNA from alignment at Ecto-sp6_S_contig101:329811..336768- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.801.1 ID=mRNA_Ecto-sp6_S_contig101.801.1|Name=mRNA_Ecto-sp6_S_contig101.801.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6958bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:329811..336768- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:329811..336768- >mRNA_Ecto-sp6_S_contig101.801.1 ID=mRNA_Ecto-sp6_S_contig101.801.1|Name=mRNA_Ecto-sp6_S_contig101.801.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1371bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:329811..336768- (Ectocarpus species6 EcLAC_371)back to top |