Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 744 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-16_001350.1 |
| Cds size | 744 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682348732.0463822-CDS-Ecto-sp6_S_contig101:294182..294281 | 1682348732.0463822-CDS-Ecto-sp6_S_contig101:294182..294281 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig101 294183..294281 - |
| 1682348732.0568259-CDS-Ecto-sp6_S_contig101:294809..295313 | 1682348732.0568259-CDS-Ecto-sp6_S_contig101:294809..295313 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig101 294810..295313 - |
| 1682348732.0654385-CDS-Ecto-sp6_S_contig101:295589..295730 | 1682348732.0654385-CDS-Ecto-sp6_S_contig101:295589..295730 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig101 295590..295730 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.798.1 >prot_Ecto-sp6_S_contig101.798.1 ID=prot_Ecto-sp6_S_contig101.798.1|Name=mRNA_Ecto-sp6_S_contig101.798.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=248bp
MALDRFLYHEIEPAAQRIFDAAVLDHAEACRLLDEKPVQAFAGGGGGRVG
VIQPPPPSSSTSVHARLPVKGRQGAVAGGAFDRPRIIDFTGGGGGGGGGG
SYSARSKIVPGRRRLLVEDNSRKKGFEEKEGGGGHRGGSSGSRGERAVAT
GSGGFAGDDVLAGAASCGRRERQIGGGGGGVTAAAAAAAAAAARRSDNLE
EEDDDVWDAPLPGRLRATDISAKIVGLSSEIRRRAAAEAGREGHRKQ* back to topmRNA from alignment at Ecto-sp6_S_contig101:294183..295730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig101.798.1 ID=mRNA_Ecto-sp6_S_contig101.798.1|Name=mRNA_Ecto-sp6_S_contig101.798.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1548bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:294183..295730- (Ectocarpus species6 EcLAC_371)
ATGGCCCTGGATCGCTTCCTGTACCACGAAATCGAGCCGGCCGCCCAACG
TATTTTCGACGCGGCCGTGTTGGATCACGCGGAAGCCTGCCGCCTCCTGG
ATGAAAAGCCCGTGCAGGCTTTCGCCGGCGGCGGCGGCGGCGTACAAACC
GCCTCCTCCAAACACCAGCAGGAGGGCCGGGGGGGTTCAAGAGGAGGGAG
CAAGCCGACCATCGTCAGTGGCAACAACGACATTCGGAGCGACCCCACAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGATGACGACGTC
GGCGTTGCGACGGGCAAAGCTTCAGGCACTGCACCTGCGACCGCAACAGC
GCCGGCGGGGGCAGTGTCGGGGGCGAGGGGTAATGCTAACCCTACCGAGC
CGCGGCAACGGGCAAAGAGGGTCGGGGTGATCCAGCCGCCGCCGCCGTCG
TCGTCGACCAGCGTGCACGCTAGGTTGCCGGTGAAAGGAAGGCAGGGCGC
CGTCGCCGGTGGTGCGTTCGATCGTCCTCGCATAATCGATTTCACCGGCG
GCGGCGGCGGCGGTGGTGGTGGCGGCAGTTACAGTGCCCGTTCGAAGATC
GTGCCCGGGAGGCGCCGCCTCCTCGTTGAAGACAACTCCAGGAAAAAGGG
GTTCGAGGAGAAGGAGGGGGGAGGGGGACACAGGGGTGGATCGAGCGGTT
CGCGAGGAGAGCGGGCGGTGGCTACGGGGTCTGGTGGCTTTGCCGGCGAC
GACGTCCTGGCGGGAGCGGCGTCATGTGGACGAAGGGAGAGGCAGATAGG
CGGTGGCGGCGGCGGTGTTACTGCTGCTGCTGCCGCTGCCGCTGCTGCCG
CTGCTAGGAGGAGTGACAACCTCGAAGAGGAAGACGATGACGTGTGGGAT
GCGCCGCTTCCTGGCAGGCTGGTGAGAAAAAAAACACGTTTTGGGGGAGT
TGGGCGTGCGGAAGGGGTCATGCCACGTTTCGCGTGTTTTTGGAAGTACT
ACGCCCCGACATGAATCAATCGAAACGGCTTGAGCACCGGCACGGATTCC
AGGCAGCAGCGGTACGTGTTACGACAGAAGGCCACCGGCAAACCGTTCTC
TTCCAAATAGAATAACATCAGTGTTTTCAAGTCAGTTATTGTTTACAACG
TGGGAGAAACCAGTGGTATCACCTCCCGCGGGTCGGTGTCGGCCACCCTC
CCGTACTCCTTCCTTTTGTCGGGGAGAAGCTCTTCTCTCTTATCCCTTGC
TGTTGTCGCAGTTGAGAACCCTCTTAAAAGACCATTCGAAGTCTCAAGTC
TCCCTGTTGTATGGCTGTATCCATCGGCCACTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTGTGTGTGTGTGTGTGTGTTCCCCCTACACTCGTTTTCATAGC
GTGCGACCGATATCAGCGCCAAGATCGTGGGACTGTCATCCGAGATCAGG
CGCCGGGCAGCAGCCGAGGCCGGAAGAGAAGGCCATCGCAAGCAGTAG back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig101:294183..295730- >mRNA_Ecto-sp6_S_contig101.798.1 ID=mRNA_Ecto-sp6_S_contig101.798.1|Name=mRNA_Ecto-sp6_S_contig101.798.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=744bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:294183..295730- (Ectocarpus species6 EcLAC_371)
ATGGCCCTGGATCGCTTCCTGTACCACGAAATCGAGCCGGCCGCCCAACG
TATTTTCGACGCGGCCGTGTTGGATCACGCGGAAGCCTGCCGCCTCCTGG
ATGAAAAGCCCGTGCAGGCTTTCGCCGGCGGCGGCGGCGGCAGGGTCGGG
GTGATCCAGCCGCCGCCGCCGTCGTCGTCGACCAGCGTGCACGCTAGGTT
GCCGGTGAAAGGAAGGCAGGGCGCCGTCGCCGGTGGTGCGTTCGATCGTC
CTCGCATAATCGATTTCACCGGCGGCGGCGGCGGCGGTGGTGGTGGCGGC
AGTTACAGTGCCCGTTCGAAGATCGTGCCCGGGAGGCGCCGCCTCCTCGT
TGAAGACAACTCCAGGAAAAAGGGGTTCGAGGAGAAGGAGGGGGGAGGGG
GACACAGGGGTGGATCGAGCGGTTCGCGAGGAGAGCGGGCGGTGGCTACG
GGGTCTGGTGGCTTTGCCGGCGACGACGTCCTGGCGGGAGCGGCGTCATG
TGGACGAAGGGAGAGGCAGATAGGCGGTGGCGGCGGCGGTGTTACTGCTG
CTGCTGCCGCTGCCGCTGCTGCCGCTGCTAGGAGGAGTGACAACCTCGAA
GAGGAAGACGATGACGTGTGGGATGCGCCGCTTCCTGGCAGGCTGCGTGC
GACCGATATCAGCGCCAAGATCGTGGGACTGTCATCCGAGATCAGGCGCC
GGGCAGCAGCCGAGGCCGGAAGAGAAGGCCATCGCAAGCAGTAG back to top
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