Homology
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match:
A0A6H5K1Z7_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Z7_9PHAE)
HSP 1 Score: 227 bits (579), Expect = 1.290e-64
Identity = 144/163 (88.34%), Postives = 145/163 (88.96%), Query Frame = 1
Query: 100 RPAGXXAATATWEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLDVAKRDAMARQAAAQXXXXXXXXXXXXXDAPMTSPAVKGKGKAPAHEGSGGGRPGARRNPSCGGQPQLVV 588
RPAG AATAT EKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRM LLKELVSVAKSLGAVSTHDLQSLEQQLDVAKRDAMAR AAAQXXXXXXXXXXXXX APMT P VKGKGKAPAHEGSGGGR G R G P +VV
Sbjct: 296 RPAGAGAATATSEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMILLKELVSVAKSLGAVSTHDLQSLEQQLDVAKRDAMAR-AAAQXXXXXXXXXXXXX-APMTLPVVKGKGKAPAHEGSGGGRSGGRA-----GIPPVVV 451
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match:
D7FHV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV8_ECTSI)
HSP 1 Score: 144 bits (364), Expect = 3.370e-39
Identity = 111/192 (57.81%), Postives = 113/192 (58.85%), Query Frame = 1
Query: 13 VEEESKMEVDSPXXXXXXXXXXXXXXXXXRPAGXXAATATWEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLDVAKRDAMARQAAAQXXXXXXXXXXXXXDAPMTSPAVKGKGKAPAHEGSGGGRPGARRNPSCGGQPQLVV 588
+EEESKMEVDSPXXXXXXXXXXXXXXXXXRPAG AATATWEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQ QAAAQ DAPMTSPAVKGKGKAPAHEGSGGGRPG R G P +VV
Sbjct: 54 IEEESKMEVDSPXXXXXXXXXXXXXXXXXRPAGAGAATATWEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQ-------------------------------------------------------QAAAQAKQDEGEEAAEEEDAPMTSPAVKGKGKAPAHEGSGGGRPGGRA-----GIPPVVV 185
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match:
A0A7S1Z2K3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2K3_TRICV)
HSP 1 Score: 80.5 bits (197), Expect = 6.950e-14
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 145 EWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLDVA 387
E+V VP P+V RLRLLCS+LRLE+C D SF +V T+ L +V NR +L+EL SVA+ LGA + DL+SL +L A
Sbjct: 242 EYVDVPRPLVSPHRLRLLCSLLRLESCRDTSFVKVNTIARRLCRVEANRTCILRELASVAQGLGADAIRDLRSLSIRLSDA 322
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match:
A0A7S1VJ82_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VJ82_9STRA)
HSP 1 Score: 76.6 bits (187), Expect = 2.960e-12
Identity = 37/79 (46.84%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 145 EWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLD 381
E++ VP V+ +RLRLLCSVL+LE+C D++F +V T+V LS+V NR +L EL +VA +LGA + +L++L+ ++D
Sbjct: 2193 EYIGVPRVVISQDRLRLLCSVLKLESCKDSAFTKVNTIVKRLSRVDANRGFILSELGTVAHALGADAIRELRALKIRMD 2271
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match:
A0A7S2QUU6_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUU6_9STRA)
HSP 1 Score: 74.7 bits (182), Expect = 1.250e-11
Identity = 39/74 (52.70%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 145 EWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSL 366
++VK P VV RLRLLC+VLR E C D+SF +V +++S LSKV NR+TL++EL SVA++L + +T DL +L
Sbjct: 660 KYVKTPRTVVAARRLRLLCAVLREEVCKDDSFSKVLSIMSALSKVKANRITLVEELGSVAQNLSSDATTDLATL 733
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match:
B7G082_PHATC (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G082_PHATC)
HSP 1 Score: 72.4 bits (176), Expect = 8.230e-11
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 1
Query: 148 WVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLDVA 387
WV+ P + ERL+ LCS+LR+E DN+F +V T+V L +V NR +L EL VA SL + S HDL++L ++D A
Sbjct: 3600 WVQAPGIEISPERLKRLCSILRMETFRDNAFSKVNTIVRRLCRVESNRGLVLAELAGVAHSLASDSIHDLRALRIRIDEA 3679
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match:
A0A7S2W4E8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4E8_9STRA)
HSP 1 Score: 58.5 bits (140), Expect = 3.580e-6
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 2
Query: 548 AGIPPVVVNLNSSSSELKLLRVLQTLVNLSGKDTEMLEK-------------LLRALDLDGLWDALSSCLTVVSVLE 739
+G P V L++SSSELKLLRVLQTL +L G +++ +K LL+++DL+ LW+ L++CL VVSVLE
Sbjct: 1238 SGTPSSAVTLSTSSSELKLLRVLQTLHSLCGSNSDDNKKSEGGAIVSQELVSLLQSIDLESLWEQLNACLRVVSVLE 1314
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match:
A0A7S4JHL0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JHL0_9STRA)
HSP 1 Score: 55.1 bits (131), Expect = 4.740e-5
Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = 2
Query: 506 RPHMKVAAVAGRGRAGIPP-----VVVNLNSSSSELKLLRVLQTLVNLSGK---------------DTEMLEKLLRALDLDGLWDALSSCLTVVSVLE 739
R + A +G G+A P V L++SSSE+KLLRVLQTL L G+ T+ L LL ++DL LWD L+SCL +VSVLE
Sbjct: 393 REKLTAAEASGDGKARSPEEGRASTAVTLSTSSSEIKLLRVLQTLHVLCGELHDDTAKKHEGNHIFITQELVDLLHSIDLQSLWDQLTSCLRLVSVLE 490
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 8
0 1 Expect = 1.29e-64 / Id = 88.34 Expect = 3.37e-39 / Id = 57.81 Expect = 6.95e-14 / Id = 51.85 Expect = 2.96e-12 / Id = 46.84 Expect = 1.25e-11 / Id = 52.70 Expect = 8.23e-11 / Id = 45.00 Expect = 3.58e-6 / Id = 46.75 Expect = 4.74e-5 / Id = 41.84 Sequence A0A6H5K1Z7_9PHAE D7FHV8_ECTSI A0A7S1Z2K3_TRICV A0A7S1VJ82_9STRA A0A7S2QUU6_9STRA B7G082_PHATC A0A7S2W4E8_9STRA A0A7S4JHL0_9STRA back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.770.1
>prot_Ecto-sp6_S_contig101.770.1 ID=prot_Ecto-sp6_S_contig101.770.1|Name=mRNA_Ecto-sp6_S_contig101.770.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=200bp
MEVDSPPPPAAAATAAATAAAAGRPAGAGAATATWEKYEWVKVPAPVVQH back to top mRNA from alignment at Ecto-sp6_S_contig101:677..3708-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig101.770.1 ID=mRNA_Ecto-sp6_S_contig101.770.1|Name=mRNA_Ecto-sp6_S_contig101.770.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3032bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:677..3708- (Ectocarpus species6 EcLAC_371)GGGTCCCCCGCAGTGGAGGAGGAGTCGAAG ATGGAGGTGGATTCCCCTCC
GCCACCTGCGGCGGCGGCTACGGCGGCGGCTACGGCGGCGGCGGCGGGGC
GCCCGGCGGGAGCGGGAGCGGCGACGGCCACTTGGGAGAAGTACGAGTGG
GTGAAGGTGCCGGCCCCCGTGGTTCAGCACGAGAGGCTGCGGCTGCTGTG
CTCGGTGCTACGGCTGGAGGCCTGCAGCGACAATTCCTTCCAG GTGGGTA
GAGGGAGTGTGGTGTGTTGCATGGTGGGCCTTGAGTAGCCCCTCCCCGGC
TACCCCTCGAACCCACGTCCGTCACGACTGTCACCCTGCTGCGCCTGTGT
TCCGCGGGGGAACTCTCCTCTAACGTCCACACGCCTTTCAAGCACGGACG
CCCCGCGCCTCCGCGCGCCCCTTTTGTGACGTTTCTCTGTCCAGGAAGGG
CTGCATGGTCGTGCGCTCAAATGGTTCCTTGTAGGCAAAAGTAGCCAGAA
GCGCGTGTGGTCAGCGCAACACCAACAGACAAGAGGAGTGGGTAGTAATA
CATCTGAGCCCCCCCCCCCCTTCCCCCCCCCCCGCGCGCTCTATCGAAAT
TCCTTGAGTGAGCGGGAACGGTTGTGAGCAACCTTTCAAAGGTCCCGAGC
ATCGCATGCCAATGGTCCAACTACTAGGGCATGCAAAACATATAAGTACG
CCCCCTCCCCGTCCCCCGTCCCCTCGCCCCCTTACAATACCCTTCAGCGA
GTGGGAACTGTGGTGAGCAACCTTTCGAAGGTGCCCGAGAACCGGATGAC
TCTCTTGAAAGAGCTGGTGTCGGTGGCCAAGTCTCTCGGCGCCGTCAGTA
CGCACGACCTGCAGTCGCTGGAGCAACAGCTCGATGTGGCGAAGCGCGAC
GCCATGGCGAGG GTGAGTTTGAGACGTTGGGATGATGGATGGAAGGGCAG
CTTGTAATTCGGTGATTGATAGTCGAGAGAGTGGGATGGGATGAGGTGGC
AGCGGCCAAGGTGTAGGTCTGTGGATAGATTGGACGAGCTCGGCGGTAAT
GATTTGTACCTCAATAATGGGGGGGGGGTTTCACGTTTTGCATGTCTTTG
TTACGACCACGCGTCTTTCCTCGAGAGGACAGAGCGGGATAGGGGGTATT
CACGTTTTGCATGTCTTTGTTACGACCACGCGTCTTCCTCGAGAGGACAG
AGCGGGATGGGGGGGGGGGGGTTACGCAATGTTGTGTTTGCGCGTGCTCG
GTGGCTTGGTTGGGGGTTGAGCCGGGTTACAAACCGCAAACCGGTTTGGG
ATCAGCGCAAACGCCCGCATGAATCCAATGGTGATTTTCCAGCCCCTCGA
CACGCCGCGCACTCGAGAAGGGCCGCCATCGTCGTCGTCGTCGTCGTCCA
GCCTTTTTTTTTTTGGCAAGAAAAGTTGTTGTTCATGACGGGGAAATAAG
CGAGAGTGCGAGAGGGGAAATGTTTGGGCGAGTTGCTATGTTGGGTAGAC
TGAGGGCAATAACTTGCTCACGCTCGCTCGTCATCTCACCCTTGCGCTCT
TTCTGGATCGTCGTCGTCGTTCCAAACTATTGGAACGAAGCAGCAGGCAG
CCGCGCAGGCTAAGCAGGAGGAGGGGGAGGAGGAGGCGGAGGAGGAAGAC
GCACCTATGACGTCGCCGGCAGTGAAGGGCAAG GTGGGTTTGTATTTTGT
TTGTGTGTGTTGACGTAAAGCTTTCAGACTTGATTTTTTGCCCACTGTTT
TGTTGGTGCCTGGCCGCGAACACCAACGGTTGCTCCGCGATGACGAGTTC
GAGATGCTTTTGTTCGCTGTTCTGGCGCAACTGCCGTAGCGTGAAGAACA
CCTGGCTTTCCGAACTACGTTATTCGTGGTGGTTATTATTGTCGTTGTCG
TTGTCGTTGTTGTTGTTGTTGTTGGTATTACCTCACTTGCTTCGATAATT
GTTTCTTGTTAGTCGTTGTTGTTTGATGTCGTTGTCGTTGTCGGCGTCAG
AGTCTCTGGTATAACAGCGCGATGACCGAGGCGGTGGTGTCCTCTGATGC
CCGTTTACGGGGCAAACACACGCTAGTTTTTCGTTTGCAGGGAAAACCCC
GTCGTGTGTGTCCGCCCGCCTCGCTTCTACCCTACCGCGGTCGAACAACG
CGTCACTCCCCTCCCGTCCCTCCCCTCCCTTCGCCTTCCCGCAACTCAGG
GAAAGGCGCCCGCACATGAAGGTAGCGGCGGTGGCAGGCCGGGGGCGCGC
AGGAATCCCTCCTGTGGTGGTCAACCTCAACTCGTCGTCGAGCGAGCTGA
AGCTCCTGCGGGTGTTGCAGACCCTGGTTAA CCTTTCGGGGAAGGATACC
G GTGAGGGGTGGTGTGTGATGCCGTGGGGAGTCAGATGGTGGAGATTTGA
TTGTGGCTTGTGACGTTTTTTTGGCCGTTTGCGGGGATGAGGTTTTGGCC
TGTTTGCTGGGATGTTGGGGGCGGGTAGTACGGCGTGGGGATTGATTGGC
CCTTGCCTGTTAGATGGGCCGTGTGCGGGGTTGAGTTTTTTTCCCTGTTT
GCTGAGATGTCGGGGGCGGGTACGATGGCACGGGATTGACCTTTGCTTGT
TAGCTGGGATGTATCTTGGGGGGGTGGGTACACATGGTTGACACCGATGC
GCCAGCCAGTGGAACCGAAGAGATAAAACAAGACGGACAACATAATTTGT
CTGTCAGCAGCAGGTGACCCGTGTGTGTGTACCCTCACGGCCTCCCAGAT
CATGGTAGCCTCTAGAAGCATCTTTGTTTCAGCCGCTTAGCGCTGTCGGT
TCTAATATCAGCGACGCCCGCACCCTCACTCAACCTCACGCACACGACCT
CCCATTTTGTTTCCATGTACGTCTGCCCCCATCCTTCGTCTCACCCGTTT
GTTGGTTCGCTCGGTGGCGGATGGATCGTCGGTCGAGAGCAGAGATGCTT
GAGAAGCTCCTCCGAGCTCTGGACCTGGACGGGCTGTGGGACGCGCTGTC
GTCGTGCCTCACCGTCGTATCCGTGTTGGAGG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:677..3708-
>mRNA_Ecto-sp6_S_contig101.770.1 ID=mRNA_Ecto-sp6_S_contig101.770.1|Name=mRNA_Ecto-sp6_S_contig101.770.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=600bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:677..3708- (Ectocarpus species6 EcLAC_371) back to top