Homology
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
D8LF51_ECTSI (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF51_ECTSI)
HSP 1 Score: 378 bits (971), Expect = 1.400e-127
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 3
Query: 324 VKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSSF 890
VKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSSF
Sbjct: 7 VKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSSF 195
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
A0A835Z1S6_9STRA (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S6_9STRA)
HSP 1 Score: 215 bits (548), Expect = 1.450e-63
Identity = 118/224 (52.68%), Postives = 146/224 (65.18%), Query Frame = 3
Query: 213 LEQMDFPASYEALRPVVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLS 884
++ M PA + A+RPVVEHEYFDHR VPQLE YL EQ SGTYDFEANKALLKLYQFFPDL + + VAL KALM +P+ DF AL Y+ P EP+ SL RA D+LE A++ FW + + ALI+ +PGF R + LA TFQ +E+ + L GAEL +FV V DG + FA NEFNQ+QPK+FKESVEF+K+LK + LS
Sbjct: 2 VQPMQLPARHAAMRPVVEHEYFDHRVVPQLEAYLAEQASSGTYDFEANKALLKLYQFFPDLVKADMVALAAGKALMALPAPDFAALSYLAPAAALAAEPLTSLARALDALEGARYGAFWAVTREPEAAALIQRLPGFADQARRVALSALAATFQSVPLSALEEAVALSGAELEAFVGGLGGEVKLG-DG-RAAFARNEFNQMQPKRFKESVEFEKVLKAVGTLS 223
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
A0A7S2FZN4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZN4_9STRA)
HSP 1 Score: 171 bits (432), Expect = 1.600e-46
Identity = 96/223 (43.05%), Postives = 140/223 (62.78%), Query Frame = 3
Query: 222 MDFPASYEALRPVVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEAN-ADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSS 887
M PASYE + +++ + F+ ++ +L+ YL+EQ+ + TYDF ANKALLKLY F+PD + +AL L KALM +PSTD M L+Y+VP + EPV +L R A LETAKFV+FW+ G L+++V GF + +R +++ L+ TFQ + L LD +L +V AN +D +S +G F N NQ +PKKFKE++ FD++L ID L+S
Sbjct: 1 MALPASYEEIATLLDEQAFEKSSIEKLQAYLDEQIATETYDFVANKALLKLYSFYPDQASDQYIALALTKALMALPSTDMMLLLYLVPESAQTKEPVATLVRCAVHLETAKFVEFWEVANLGGNE-LLDAVSGFDEAIRSYMIGVLSITFQKVESETFADLLALDEGDLEEYVSANQSDKLSI--EGKNVVFTPNSENQQRPKKFKENISFDQMLPLIDFLAS 220
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
A0A7S2H0N4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0N4_9STRA)
HSP 1 Score: 153 bits (387), Expect = 6.430e-40
Identity = 87/223 (39.01%), Postives = 131/223 (58.74%), Query Frame = 3
Query: 219 QMDFPASYEALRPVVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFAL-NEFNQIQPKKFKESVEFDKILKTIDKLS 884
+M+ P S +++ + + + L+EYL EQV++ TYDF ANK L+KLYQF+P+ +AL + K++M +PSTD L+Y+VP L EP+H+L R AD LETA+FV+FW+ G L++++PGF + +R F++ L+ TFQ + L LD L F+ D + + KF L N NQ +PKKFKE++ FD +L I+ LS
Sbjct: 5 EMEIPQSAQSIAEKLALDEHSVELIDTLQEYLNEQVQTDTYDFMANKTLMKLYQFYPERSNENCIALAVTKSMMALPSTDLSVLLYLVPETLALKEPIHTLVRCADHLETARFVEFWEVANLGGNE-LLDAIPGFPEAIRSFMIGVLSMTFQKLQSETFLDLLMLDEESLEEFIAEQTDKLCL--EEKKFVIFLPNSENQSRPKKFKENISFDHMLPIINLLS 224
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
A0A7S2WSD7_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD7_9STRA)
HSP 1 Score: 148 bits (374), Expect = 4.650e-38
Identity = 85/215 (39.53%), Postives = 122/215 (56.74%), Query Frame = 3
Query: 243 EALRPVVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSS 887
E++ + +D A+ LE Y+ EQV+ TYDF ANKALLKLYQFFP VAL+L KALM +PSTD L+Y+VP + EP+ +L R + LET KFV+FW+ G L++++ GF + MR +++ L TFQ + + L LA +V +DV+ +G + F N NQ QPK FKE++ FD + + L+S
Sbjct: 12 ESVATALRRNEYDQDAIELLESYVAEQVEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQSLESEVFMDLVALPDEHLAEYVGTKSDVMRL--EGKQVIFVENPQNQPQPKTFKENISFDHLAPVMSLLTS 223
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
W7U338_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U338_9STRA)
HSP 1 Score: 142 bits (357), Expect = 3.240e-35
Identity = 83/220 (37.73%), Postives = 130/220 (59.09%), Query Frame = 3
Query: 231 PASYEALRP-VVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSS 887
P+SY ++ V+ + V LEEYL+ QVK G+YDFEANK+LLKLY +P L E V +L KAL+N+P+TDF L+YI+P L E V ++K AA++LETA++ DFW A+ ++P +K +R I+ A T++ + ++ + L G EL SF+ AN + A + + FA N+ NQ +K+KE V+ +L +++L++
Sbjct: 44 PSSYNSVHSNVLGDGLYTQEKVKHLEEYLQLQVKEGSYDFEANKSLLKLYLLYPPLANNENVETILLKALLNLPATDFTLLLYILPEKLQTDENVLTIKDAAEALETARYADFWSIL--NSRAAVFLAIPEWKDDIRKIILTVHAATYKAVDKAHVSDGVGLSGDELDSFLTANTPGLVAKVEVDRVIFAPNKENQPWVRKYKEKVDLQNMLGILNRLAA 261
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
A0A7S4ULZ9_GUITH (Eukaryotic translation initiation factor 3 subunit K n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4ULZ9_GUITH)
HSP 1 Score: 131 bits (330), Expect = 6.190e-32
Identity = 73/210 (34.76%), Postives = 117/210 (55.71%), Query Frame = 3
Query: 243 EALRPVVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTI 872
E ++ ++ FD PQLE Y++EQ+K G D +AN ALL+ YQ+ P E V +L KALM +P+TDFM MY+VP + + + LK+ +D LET +F ++W AD ++ +PGF + +R +IV ++ T+Q R +E ++L GA+L +E V GS + +NEFN+ K ++ + FD++ I
Sbjct: 3 EEVQRLLSERRFDPSITPQLEAYVDEQIKGGYTDLDANLALLRFYQYNPATANSEVVCKILVKALMQMPATDFMLCMYLVPGAVKE-QKIEVLKQLSDKLETCQFKEYWADMADEKNASVANGIPGFHEAIRQYIVGVISATYQVIARDELEILINLKGAQLDQLLEEKKWVAK----GSDVQIPVNEFNEASVKFKQDGISFDQLAPII 207
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
A0A7S2SPG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPG3_9STRA)
HSP 1 Score: 121 bits (303), Expect = 1.090e-28
Identity = 64/144 (44.44%), Postives = 89/144 (61.81%), Query Frame = 3
Query: 243 EALRPVVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQ 674
E++ + +D A+ LE Y+ EQV+ TYDF ANKALLKLYQFFP VAL+L KALM +PSTD L+Y+VP + EP+ +L R + LET KFV+FW+ G L++++ GF + MR +++ L TFQ
Sbjct: 12 ESVATALRRNEYDQDAIELLESYVAEQVEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQ 154
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
A0A067CBU0_SAPPC (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBU0_SAPPC)
HSP 1 Score: 114 bits (285), Expect = 1.680e-25
Identity = 81/217 (37.33%), Postives = 121/217 (55.76%), Query Frame = 3
Query: 246 ALRPVVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCQPE----KVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLS 884
A+R V + D + V LE YL+EQ+ S D EAN LLKLY +P +PE +VA VLAK LM +PS F+ Y+V L + + + L +A D L++ F DFW D+P + +PGF++ +R FI+ T+A + + + ++ L+L ++AS V A++ + D S + N NQ++PKKFKE +EF IL TI LS
Sbjct: 18 AVRAQVAADGMDEKLVGLLEAYLDEQIASNVVDEEANLMLLKLYTIYP--VKPEQHQTRVAQVLAKGLMALPSKYFLGATYMVTEALRKDKNITDLLKAGDVLQSCLFTDFWTL----DLP-FAKKIPGFEQAVRAFILSTIAKSHEVVAKAFVQAQLNLSEKDVASLV---AELGWTTKDAS-YVVTPNSENQMRPKKFKEDIEFADILDTIQVLS 223
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Match:
A0A1X6NQY4_PORUM (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQY4_PORUM)
HSP 1 Score: 113 bits (282), Expect = 4.710e-25
Identity = 63/170 (37.06%), Postives = 103/170 (60.59%), Query Frame = 3
Query: 258 VVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSA 767
+++ + +D +P LEEY+E+QV +GT D AN A LKLYQF+P + V+ +L KA+M +PSTDF+ MY++P EP+ +L + A LET +F DFW A G + L++ VPGF + +R F++ + T++ R + + L L+G + A+ A +V+ +
Sbjct: 17 LLQSQRYDPDILPTLEEYVEQQVATGTNDAMANLATLKLYQFYPATYKTAVVSKILIKAIMALPSTDFLCAMYLIPAATADDEPIPALVQLASMLETGRFEDFWP--ATGAVRQLLDGVPGFDEAVRSFMLVVIGRTYKRVERTVLARLLGLEGVDEAAEEAAVDEVIKS 184
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.767.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.40e-127 / Id = 100.00 Expect = 1.45e-63 / Id = 52.68 Expect = 1.60e-46 / Id = 43.05 Expect = 6.43e-40 / Id = 39.01 Expect = 4.65e-38 / Id = 39.53 Expect = 3.24e-35 / Id = 37.73 Expect = 6.19e-32 / Id = 34.76 Expect = 1.09e-28 / Id = 44.44 Expect = 1.68e-25 / Id = 37.33 Expect = 4.71e-25 / Id = 37.06 Sequence D8LF51_ECTSI A0A835Z1S6_9STRA A0A7S2FZN4_9STRA A0A7S2H0N4_9STRA A0A7S2WSD7_9STRA W7U338_9STRA A0A7S4ULZ9_GUITH A0A7S2SPG3_9STRA A0A067CBU0_SAPPC A0A1X6NQY4_PORUM Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 378.6 Seed ortholog evalue 2e-102 Seed eggNOG ortholog 2880.D8LF51 Preferred name EIF3K Model size 1520 KEGG ko ko:K05699,ko:K13344,ko:K15028 KEGG TC 3.A.20.1 KEGG Pathway ko04146,ko04510,ko04520,ko04530,ko04670,ko04810,ko05146,ko05203,ko05322,map04146,map04510,map04520,map04530,map04670,map04810,map05146,map05203,map05322 Hectar predicted targeting category other localisation GOs GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005852,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010941,GO:0010942,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0042981,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:1901564,GO:1901566,GO:1901576 Exons 7 EggNOG free text desc. ribosome binding EggNOG OGs KOG3252@1,KOG3252@2759 Ec32 ortholog description eukaryotic translation initiation factor 3 k subunit Ec32 ortholog Ec-06_001720.2 Cds size 687 COG Functional cat. J Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko03012,ko04131,ko04147,ko04812
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348727.886073-UTR-Ecto-sp6_S_contig100:638322..638949 1682348727.886073-UTR-Ecto-sp6_S_contig100:638322..638949 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 638323..638949 - 1682348727.9571302-UTR-Ecto-sp6_S_contig100:642944..643002 1682348727.9571302-UTR-Ecto-sp6_S_contig100:642944..643002 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 642945..643002 - 1682348727.9664164-UTR-Ecto-sp6_S_contig100:644292..644440 1682348727.9664164-UTR-Ecto-sp6_S_contig100:644292..644440 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 644293..644440 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348727.898702-CDS-Ecto-sp6_S_contig100:638949..639057 1682348727.898702-CDS-Ecto-sp6_S_contig100:638949..639057 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 638950..639057 - 1682348727.9102712-CDS-Ecto-sp6_S_contig100:639820..639892 1682348727.9102712-CDS-Ecto-sp6_S_contig100:639820..639892 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 639821..639892 - 1682348727.9186902-CDS-Ecto-sp6_S_contig100:640562..640703 1682348727.9186902-CDS-Ecto-sp6_S_contig100:640562..640703 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 640563..640703 - 1682348727.9278958-CDS-Ecto-sp6_S_contig100:641348..641489 1682348727.9278958-CDS-Ecto-sp6_S_contig100:641348..641489 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 641349..641489 - 1682348727.9377427-CDS-Ecto-sp6_S_contig100:642089..642197 1682348727.9377427-CDS-Ecto-sp6_S_contig100:642089..642197 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 642090..642197 - 1682348727.947838-CDS-Ecto-sp6_S_contig100:642827..642944 1682348727.947838-CDS-Ecto-sp6_S_contig100:642827..642944 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 642828..642944 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.767.1
>prot_Ecto-sp6_S_contig100.767.1 ID=prot_Ecto-sp6_S_contig100.767.1|Name=mRNA_Ecto-sp6_S_contig100.767.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=229bp
MPLEQMDFPASYEALRPVVEHEYFDHRAVPQLEEYLEEQVKSGTYDFEAN back to top mRNA from alignment at Ecto-sp6_S_contig100:638323..644440-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.767.1 ID=mRNA_Ecto-sp6_S_contig100.767.1|Name=mRNA_Ecto-sp6_S_contig100.767.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6118bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:638323..644440- (Ectocarpus species6 EcLAC_371)TCTGACTTCCCCCGCGGCTCTCTCCTCTGCTCCAGTCGGTTCCAAGCACG
CGTAGAGCGTTTATCGAGTAAGGTCGGAAGACAGCTGTTTTGCAAGGTCT
AGCGCAACGTGTGGGTGGCTTTGATCAAGGAGACAGCATTTGAAAAAG GT
GTGTGACAGCAATGGCTGTAGCGGACTTGCGGCTGGCTGCCTTGCTGGAC
AGTAGTGTCTGTGTTAGGACGGAGAATGCACTGTTGTGCCATTTTGGAAT
ACCTTTACGACCATGTCTCCAGCTGAGAGCCACCGCTACAACTTTTGCAG
AGATTCGCAACATGTAAAGAAGGTGTTAGTCTCTGCCGAAGACCTGGATG
GAGAGTACGTACGTGAGGAAGGTGACACCTCTCAAGTCAAGTCTACATGG
TTTGCACTATCGAGATTGAGTCGTCATGCGCAACCATCTCCTATAAATGT
TGGAGATTATTGCTCTCCAAAGCAAACAAACGGCTGCAGTAGACTATGTA
CAGCCGTAGGTGCACTCCTACCTCAGGTCTACAGGTAATATCGTCGAAAC
ATGTAGCATACCATCCCCCCCCCAATGTCGGCCGCTTACTCAACCGACAG
AAGCGTCTCTTGACCCCTTTAGGGCTGGATCGCCTTTTGGGGACACTTTT
TGTCCCCATCTTCTTCACCTGCTTTACCTCGCGAAGAATTGCATGATTGT
CTCATCCTTTGCACTACTCGATCGGGGGTTGCCAGGGTACACAGGGACGA
CTCAAGTCTAGTATGGATGCTTTGCAGAGTGGAGGAGTATGAGGGCAACG
AACAGGTCGAATCGCGGGGCGATTACGCCGCGGGTTCAACAGTGAAGTTG
CGCCGCGTCTGTCTATCCTTGGGTGGAAAGCGCTACTAGGGGCAAGCGCG
GAAGAAGTACATAGCCCACCGTTGATAGGAGACACCGAGCAACCTAGGGC
TTGAGTTAGAAGGTCTCGCTTTCCCTCTAGAGAAATATCTTGAAAATCTC
CTTTTCGTGCCCCGTTTACCACGCTCCCGCCAGTTGCTGTCTATAATCCC
TATCAAATGTCCCCTCGTATCGAGGGAAAAATTGATAGGGATCATACACA
AGAGACGGCTCAAGGGGGAATGCAGCTTTGCACTTGCACCCAGCGGTGGA
ACTGTCTGCACCATCCAATCAGCAGGCGTCGTTCGCTCTTTTTGTTACAT
TTCACAAATTTCGCATGAACGCCGAATTTTCTGTGCGTGGTAAGGGGGTA
AAACCCAAATGGCACGATTCCCGTACGCTCGTGCAAGTATTCACAATGAC
ACCGCCGGGTTGCCGTCATGGATAAATCGATCTCCATTTGAGGGGATAGT
GAGTGGTCGTTACCGCGGTACGTGGACAGCCAGCAATGGAGTGCAACTGA
TGTATCGCCGGTCGTCGTGCTGCCGGCAAACCATGCAGGTCTCCTTATTC
GTCGTGCGGCGACGTTCCGGACTACCTGTTTCATCTTTCGTTCATC ATGC
CGCTGGAACAAATGGACTTCCCGGCGTCGTACGAGGCTTTGAGGCCGGTC
GTGGAGCACGAGTACTTCGACCACAGGGCGGTGCCCCAGCTGGAGGAGTA
TCTTGAAGAGCAG GCGAGGAGTCAGATCCAACGGGGCCGCGGCGGGGGGT
ACATAGGGCGGCGCACTCAACAGCATGCCTGGTCGCAAATGAGTGTCATA
ACACCACCCTTGCGTTTGAAAGGGCCAGGCGGATGATGGATTTTACAATC
ACCACAAAGCCCTTGAGGGGCGGCGCGGGGGAGGCGACTTGGCCGCCGCT
TGTCGAGGGCAACCAAACGTGTATGTTTCGTGTATGTATCATTGAATCGT
CGGCCATACGTCTCTCCCAAGACGGAGTGGTAGTGTCCAAGGAAGGCTGG
AGGAGTATATCGTCCCTCGTCGCGTGTCTGTTCCTTGGGCGATTTGACCA
TGCACCCCTTTGACATGAAGAAGTAACCCGTTCCTATTTTCAAGATCGGC
TGAGCCTGTATTGAGCGTGGCCGTTGCTTTGCCGCACATGGTTTGGTGGG
TTTTCCTGTGATGCGGCACTGCTGTAAGCTGTTTGCATGCCCCCCCCGGG
ACTCCTCCTTAGCGACGTCCCAAGCTAAACCGCCGTCATGCGCGGATCTT
GTGAAGTAAGCTAGAATATGTCGGGGTTTTCCCTTCGCCTAACCCGCTGC
CGTGCGCGTTGCTTTTTTGGCACACGAAACAAACGTCGCGCAGGTGAAAT
CGGGGACATATGACTTCGAGGCCAACAAGGCCTTGCTTAAGCTCTACCAA
TTCTTTCCGGACCTCTGCCAGCCGGAGAAGGTTGCTCTCGTTCTCGCGAA
G GTGCATACAGTAGGTCATCACTAGCACCAACATCCCCCCGCCTTGACAC
AAGCTAGCGGTGGGTCTACCTGATTCAACGATGCAGCAAGGTCGACCGAT
TAGGTTTTCTGGACGCGGCTATGATTTTGTCCGCTGTAAATCTGGTGCTG
CTATGCATGTAGCTCATTTGGCCCTACAGCATGGGGGGGCGTACTCTTAT
GTTTTGCATGCCTTAGCAGTTAGACCATTGACCACGCATCCTCGAGAGGA
CGTAGCCTTGTTCCCACAGGACCGATCACCGATGGCCAATCGTTCCTCCC
TACTTTACCAAAGGTGTGTCAGCGTGGGAGGGGGTCGACATAAGGCGGAG
GGGGGCTGCTGAAAGCGACCGCCTTGTATCGAGGAACCGCCTCCTTCAAC
GTATATGTAACAGCTTGATTAGTCTAGCTGTGCCAACGGTTTTCAGCAAC
ACTTGGTCGCCCCCCCCTACCGTACATTGCTTGGCCAACAATTCCCGACC
GCCTACTTCTGTATTGTTTCAAAGGGGTGCCATGTCGACGCCGCCGCGAG
AGGCAAACTACCACCACATACCCTCCCTCCCGCTCGCCGATATCATTCCA
GGCGCTGATGAACGTGCCGAGCACGGACTTCATGGCCTTGATGTACATCG
TGCCGCCGAACCTGCACCGGTGCGAACCTGTGCACTCGCTAAAGAGGGCG
GCGGACTCGTTGGAGACGGCCAAATTTGTCGACTTTTGGCAG GTGAGAGC
AGACAAGAGACAAGAATGATGACACTCCTGCACCTGTTCGAAAACCCTCG
AAGTTTTGTGCCAGTGGTTGTGAAGGTGGTTGCAGAAGCCCTCACGTCCA
ATTGTTTGTGACGATTTCATCACTTCTCCTCCGAGAGTTGCGTGCTGATC
CTGCTCAGAAAGAGACGACCTGCGTGGCAACAGGCCATCCCCTCCCAGAC
GCCGAAACGATTTTTTTCGTAAGCCAATCACGGACGCCATGCCGGAAGCC
CCGGTAGTCTATGTAGTTGGTATCCTCGAAGACCTTCTAGTGGTGAGGGT
CAGGGGTTCGAATCCCGGCGTACGCGAGCTTTTCGTGCAAAGTGGGTTTT
CTCTCGCTTCCGTTTCTGGCCTGGGTGGAAAGCGGTAGTTCGTGTGTACA
CACAGAGGGAAGAGAGTGCTGCGCTCTTCTCGCATGAACAATCGAAGGCA
AAGTACCGCAGGAGGGGTGGTTAGGGGGAAACCCTTCTGTGTGACCACGG
GTTGGAGTAAATGGCACAAATGCTGTGAGCGCTGATTTCAAGTGAAGCAA
AAAAAAATCACGGTAGTGGATATATTCGCTTGAATTGTATCTTCCTGACA
CAGCCATTGTTCACCTTCTTGGTCTTCGGTGCGGCAGACCTGCGCGGACG
GGGACATGCCAGCCTTGATAGAGAGCGTACCCGGGTTCAAGAAGCACATG
CGTGTGTTTATCGTCCACACCCTGGCCACAACCTTCCAAGACTCGACGCG
ACAGAACATGGAGCAGTGCCTCGACTTG GTGAGCGACTTGCCTTCCTGAC
ATCAAGAGATATTTTTGAAGTGTAGTATCCTTGTTTGTCGGGGTCACTGC
TTTTTTTACTATTTACTGTAGTAGTAGTGAATGGTGCGATGTTGCTGACA
GAACCGTGGTGGAAGAGGCGAGTGTTTTTTTCTCTGCAAGAGAGAAGCTC
AAGCAAAAAAGGTTACAACAATTCCGGCGGTGCTTGAGCTCTTGTCTTCT
TGCAGTGGGTGAGAATGGTTGATCACCTGTCGGGACGGCGCCAGCCCTCG
ACTTTCGATTCTCAGGACATCACCAACATCAGTTGAAAATGTTTTCAGTA
AATCTGATCGTAGATGTCCTCTCGGAGCAAAAAAGTTCTCCAGCCGCCGA
GCCCGTTGCCGAGAGTCGGTGTTCCGTGGCGTGCTGCAACTGACTTCGAA
CCCACCGCTTCTGCTATCGACTTTTTCTCCCTTTCCTCGGGATACAGTAA
AAGTGTCTCACTTCTTTAACGCATGACCGGGTTCTTCGTGTTTTTTCTTG
CTGAACGTCTCTCCCCAACGACGATGCCAAACCAACTCTCCCCCGTGTTC
CCGCGTTGACCCAAACCGCCCACCACCGCTTCTTCTCCTTTTGTGTGTTT
TGCTTGCGGCCTCGCGACGTGGCATGCTTGCCGCTGTGGTCCTTTCAGGA
CGGAGCCGAGCTAGCGTCGTTTGTGGAGGCGAACGCGGACGTCGTATCGG
CGTCGCCGGACGGATCAAAG GTAAGACGCGGCCCCTCTCAAGTACCACTC
ATTGTTTATTTGCCTTCCCTTTTGACCTTTGTTTGGTTGTTTCGCCGGGG
TAATGGGGATGCAAGGCCCGACCGCATCACCTCCACGTGGTCCCTGGGTG
TGGGCGTGTGATTATTGCGGACGTCAATCCCCACATTAAAAAAAAATGGA
CGATTTCATCCGTTTATGAAGAGAGAGAGAGCGACCAGCCTTGGGACAGA
GTCGATGCGAAATCTCCCGAATCGCCATGAACAAAATTGTTCGTGATTTC
AGACGGGAGTGTTGAGCCAGGCAGCCGCCAGTGCGGGCAATGGTCGGTGC
ACCTTTGAAGGCAATGTTAATCATTCGCTGTTGTCGCTCCCCCCCACGAG
AGTAGCCCCTCCTGTTTGGTTTCTTCATCGCTTCTCACGCGCGTACCCTG
TTTGTCATTCCCTGCATTTGAAACCCAACAGCAGTGAGTAGTGCTCATGC
ACAAGCAGTTTGTCTTTTCGTGGGCTGTAGAACGGTACTCGTTGGACGTT
GTTTGGTTATCCATCTGCAACTTGTACTTTGCAGGGGTGCGACCCTTATC
ACACTCCGAGAGACTCCTGCTGTTTCGTGTATGATTGGACCCACCATACC
CGGGTCGCAACGACACAAAGACGCGATCTGATATATTTTTCCCAGGGCTG
TTGTGTTGCATGCACATCGACGTCAGAATGGCTCACAGTACCTCAGTTCG
ACCCTGTTCCTCCTTGTTTCGTCTTGGGTGCAGTTCAAGTTTGCTCTGAA
CGAGTTCAACCAGATTCAGCCCAAGAAGTTCAAGGAGTCGGTGGAGTTCG
ACAAGATTCTCAAGACCATCGACAAGCTTTCCAGCTTTTAA ACGACGACC
CTGCCGGCCGCTGAAGTAGTAGTCCCTGAACAGCAGGAACAGTAGTAGTC
TCCAATTGTGGGGGCCTAGGACAAGTTGGTTCACACATAGAAGCGTTTGA
GAGGTGTGAAGCTAGACGGCCGAGTGTGGAAAGTACGTACTTGTTCGTAC
GTGCACGAATTGGACTTGCGTGGTATTCTTGACGACGACCGAGGAAAGAT
CTCCAACGTTTTTCGCGACGAAGGTGACGGCATGCACTGCGGAAGACCTC
TTCTGTGGGACCCCTGGATAGTTGTGCCTCGGTATAAACGAAAAACAGAC
CGCAAGGGGGGCAGAAAGTGCGAGGCAAAAGGTGTGGGTTGTTCGAACGC
ACTTCTCTCTATGGAGATTCCGGAAAGAGGAGCACCGTCCGAAGATTGGA
GGCATGGCACGTCGAAAGGCTATTGCTGCCGTAGTAGCGCTTGGCGAATC
TAAAAGAACACCGTGTCTGGCGAGCCCTTTGGAAATCGAGAAAAGGAAGC
GAAAAAGTGAAATGGGTCACTAGCTCTTGCCTTTATGGGTGTTGTCACAA
CGGCAGCGTGTCAGTTTCCACGTGATGCTGGCCCTTTCAACTGTACCCGG
TAAGGAGCCTTCACGACG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:638323..644440-
>mRNA_Ecto-sp6_S_contig100.767.1 ID=mRNA_Ecto-sp6_S_contig100.767.1|Name=mRNA_Ecto-sp6_S_contig100.767.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=687bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:638323..644440- (Ectocarpus species6 EcLAC_371) back to top