Homology
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE)
HSP 1 Score: 153 bits (387), Expect = 1.350e-37
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 3
Query: 258 VPPFRPREVTWNLPPSMLSEASKDAFTNLECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQHVDKVLWAAS 482
VPPFRPREVTWNLPPSMLSEASKDAF NLEC+SFSDAVERSGD FDGV LPRGLKSVVFGRWCYQHVDKVLWAAS
Sbjct: 78 VPPFRPREVTWNLPPSMLSEASKDAFKNLECMSFSDAVERSGDSFDGVALPRGLKSVVFGRWCYQHVDKVLWAAS 152
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
D8LF50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF50_ECTSI)
HSP 1 Score: 122 bits (307), Expect = 2.430e-28
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 3
Query: 306 MLSEASKDAFTNLECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQHVDKVLWAAS 482
MLSEASKDAFT LECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQHVDKVLWAAS
Sbjct: 1 MLSEASKDAFTKLECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQHVDKVLWAAS 59
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI)
HSP 1 Score: 80.9 bits (198), Expect = 1.060e-14
Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 10 SRYIGTFIVALNETCGGKE--WYISTVQLQLASLEFCVACRSVPTLHLTVEEGTPRHLWA 183
S+ + F+VALN+TC G+E WY ST++LQL SLEFC ACR VPTLH+ V+ TPR LW+
Sbjct: 39 SKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWS 98
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)
HSP 1 Score: 82.4 bits (202), Expect = 1.080e-13
Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 1 AGSSRYIGTFIVALNETCGGKEWYISTVQLQLASLEFCVACRSVPTLHLTVEEGTPRHLWADNCSDQGNARGSSGGSS 234
AG SR + F VALN+ C G WY+ST QLQL+SL FCVACRSVPT+HL V+ TP L++ + D R GSS
Sbjct: 25 AGPSRCLDAFKVALNQACDGGGWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGD-DDAAAVRDKGHGSS 101
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)
HSP 1 Score: 82.0 bits (201), Expect = 3.310e-13
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 4 GSSRYIGTFIVALNETCGGKE--WYISTVQLQLASLEFCVACRSVPTLHLTVEEGTPRHLWA 183
G S + FIVALN+TC G+E WY ST++LQL SLEFC ACR VPTLH+ V+ TPR LW+
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWS 74
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
D7G3G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G0_ECTSI)
HSP 1 Score: 71.2 bits (173), Expect = 5.920e-12
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 4 GSSRYIGTFIVALNETCGGKE--WYISTVQLQLASLEFCVACRSVPTLHLTVEEGTPR 171
G + + FIVALN+TC G+E WY ST++LQL SL+FC ACR PTLH+ V+ TPR
Sbjct: 5 GRRKCLDAFIVALNQTCDGRENRWYASTLELQLVSLKFCGACRRFPTLHVRVDRQTPR 62
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)
HSP 1 Score: 77.4 bits (189), Expect = 2.050e-11
Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 10 SRYIGTFIVALNETCGGKEWYISTVQLQLASLEFCVACRSVPTLHLTVEEGTPRHLWA 183
S + T VALNETC GK WY ST +LQLASLE C+ACR TLHLTV+ TPR L A
Sbjct: 134 SSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLA 191
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)
HSP 1 Score: 76.3 bits (186), Expect = 3.130e-11
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 31 IVALNETCGGKEWYISTVQLQLASLEFCVACRSVPTLHLTVEEGTPRHLWA 183
IVALNETC GK WY ST +LQLASL+FC+ACR+ T+HL V+E PR L A
Sbjct: 56 IVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLA 106
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI)
HSP 1 Score: 73.2 bits (178), Expect = 3.270e-11
Identity = 34/67 (50.75%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 4 GSSRYIGTFIVALNETCGGKEWYISTVQLQLASLEFCVACRSVPTLHLTVEEG-TPRHLWADNCSDQ 201
G R + F VALN +C G WY ST +LQLASL+FCV CR VP+LHL V P LW D+ + +
Sbjct: 3 GPGRCLEAFAVALNTSCDGNVWYTSTKELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATE 69
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match:
A0A6H5JEK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK4_9PHAE)
HSP 1 Score: 76.3 bits (186), Expect = 3.560e-11
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 AGSSRYIGTFIVALNETCGGKEWYISTVQLQLASLEFCVACRSVPTLHLTVEEGTPRHLWA 183
AG +R + FIVALN++ GGK+W S LQLASL FCVACR+VP+ +TV+ GTP LW+
Sbjct: 6 AGPNRCLDAFIVALNQSWGGKKWCTSVATLQLASLPFCVACRNVPSPCVTVDTGTPPRLWS 66
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.35e-37 / Id = 94.67 Expect = 2.43e-28 / Id = 98.31 Expect = 1.06e-14 / Id = 60.00 Expect = 1.08e-13 / Id = 53.85 Expect = 3.31e-13 / Id = 61.29 Expect = 5.92e-12 / Id = 56.90 Expect = 2.05e-11 / Id = 63.79 Expect = 3.13e-11 / Id = 66.67 Expect = 3.27e-11 / Id = 50.75 Expect = 3.56e-11 / Id = 57.38 Sequence A0A6H5JG83_9PHAE D8LF50_ECTSI D7G0Z9_ECTSI A0A6H5JFC0_9PHAE A0A6H5KLV1_9PHAE D7G3G0_ECTSI A0A6H5KPY7_9PHAE A0A6H5JRF9_9PHAE D7FXS2_ECTSI A0A6H5JEK4_9PHAE Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.766.1
>prot_Ecto-sp6_S_contig100.766.1 ID=prot_Ecto-sp6_S_contig100.766.1|Name=mRNA_Ecto-sp6_S_contig100.766.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=391bp
MLSEASKDAFTNLECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQH back to top mRNA from alignment at Ecto-sp6_S_contig100:634606..636215+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.766.1 ID=mRNA_Ecto-sp6_S_contig100.766.1|Name=mRNA_Ecto-sp6_S_contig100.766.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1610bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:634606..636215+ (Ectocarpus species6 EcLAC_371)GCAGGAAGCAGCCGGTACATTGGCACCTTCATTGTGGCCCTTAACGAGAC
GTGTGGCGGAAAGGAATGGTACATCTCGACGGTGCAACTCCAGCTCGCAT
CGTTGGAATTCTGCGTGGCTTGCCGAAGCGTTCCTACGTTGCACTTGACT
GTGGAGGAAGGCACGCCTAGGCATCTTTGGGCTGACAACTGCAGCGATCA
GGGCAACGCCCGCGGGAGTAGTGGTGGAAGTTCCGACGGGCGGAGCGTTC
TTGTGCGGTGCCTCCTTTTCGACCCCGCGAGGTGACATGGAACCTTCCAC
CTTCG ATGCTGAGCGAAGCGAGTAAGGATGCTTTCACAAACCTGGAATGC
TTGTCGTTCAGCGACGCAGTCGAGCGCAGTGGCGACAGGTTTGACGGGGT
CACCCTACCTCGTGGTTTAAAGAGCGTGGTCTTCGGTAGATGGTGCTATC
AGCATGTCGACAAAGTTTTGTGGGCGGCATCTCTGAAGCAGATAACCTTT
GGCAACAAGTTCAACCGCTCGATCAAGAGAATAGTCTGGCCAACATCGCT
GGAACGAATTGTATTTGGGTGGAACTTCAATCAGCCAGTGGAAGGGGTCC
ATTGGCCAGCGTCACTACGACAGCTCAACCTCGGCGAATGCTTCAACCAC
CCGGTTGAAGAGGTCGCGTGGCCGTCATCACTGGAAGAAATCGTGTTCCC
GGGAAGCTTCGACCAGCCAATTACAAGGGTCAAGTGGCCAGCGTCATTGC
GACATCTCAAGTTTGGGTCTGGCTTCAATCAGCCAATTCACCAGGTCAGC
TGGCCGGGATCGCTGAAAAAACTCGTGTTCTCAGAAAAATTCAACCAGCC
AATTCACCTCGTCAGCTGGCCGACTGCAGTGGAAGTGATGAGTTTAGGCT
TGATGTTTGACCAGCCAGTCAATGAGGTCAGCTGGCCGGCATCGCTGAAA
CAGCTTGTGATCTCGGGAAGATTCAACCAGCCAATTCACCTGGTCAGCTG
GCCGACTTCACTGGAAAAGATACGTGTTGGCTTATTGTTCGATCAGCCCA
TCAGTGAGGTCTCGTGGCCGGCATCGCTGAAAGAGCTCCAGTTCCTAGGA
AAATTCAACCAGCCTATTCACCTGGTCAGCTGGCCGACTTCACTGAAAAA
AATGGTTTTCGGCAACTCCTTCGATCAACCCATCAACGAG GTCTCGTGGC
CGGCATCGCTGAAAGAACTCCAGTTCCAAGAAAAATTCAACCAGCCAATC
CACCAGGTCAGCTGGCCGCCTTCACTGGAAAAAATGTTTTTCGGCAACTC
CTTCGATCAACCCATCAATGAGGTCTCGTGGCCGGCATCGCTGAAAGAAC
TCCAGTTCCAAGAAAAATTCAACCAGCCAATCCACCAGGTCAGCTGGCCG
ACTTCGCTGGAAAAAATGTTTTTCGGCAACTCCTTCGATCAACCCATCAA
TGAGGTCTTGTGGCCGGCATCACTAAAAGAACTCGTCATCACGGGAAAGT
TCAATCAGCCACTGCACCAGGTCCGTTGGCCGACTTCCCTGGAAAAGTTG
GTTGTAGGCGACGCTGAGGCAACCCCCCTTTTAACCGAATTCAACCAACT
ACGCAGTTGA back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:634606..636215+
>mRNA_Ecto-sp6_S_contig100.766.1 ID=mRNA_Ecto-sp6_S_contig100.766.1|Name=mRNA_Ecto-sp6_S_contig100.766.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1173bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:634606..636215+ (Ectocarpus species6 EcLAC_371) back to top