mRNA_Ecto-sp6_S_contig100.748.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.748.1
Unique NamemRNA_Ecto-sp6_S_contig100.748.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match: D7FRM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM4_ECTSI)

HSP 1 Score: 879 bits (2270), Expect = 0.000e+0
Identity = 450/458 (98.25%), Postives = 453/458 (98.91%), Query Frame = 3 
Query:   24 MEEFLAAAKGGVTSISGDQWVAILRRFSTAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDATCGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLDTLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTPEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLCADEEEFTTRCGFGNAVNTLRLRGMISVPGIG 1397
            MEEFLAAAKGGVTSISGDQWVAILRRFSTAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDA CGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLD LVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFT EEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVW+QRLEREKRELASLTGD+YKRAEK+SKDKRVHPVDAPKGTLRAR LKQMTATESSSKTAVSDLLFNLC DEEEFTTRCGFGNAVNTLRLRGMISVPGIG
Sbjct:    1 MEEFLAAAKGGVTSISGDQWVAILRRFSTAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDAACGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLDMLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTQEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWKQRLEREKRELASLTGDNYKRAEKISKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLCVDEEEFTTRCGFGNAVNTLRLRGMISVPGIG 458
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BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match: A0A835YV73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV73_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.340e-34
Identity = 152/572 (26.57%), Postives = 224/572 (39.16%), Query Frame = 3 
Query:   78 QWVAILRRFSTAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDATCGFRVSLMALKCLNNAVWDQ---PKGQISFVQLGGLDTL-------------------VGLLQASRPASVLY-----------------------------FACRIFNVVGSSNPTAFNELKKK---------------------QDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQ----------------------------------------ALQGLFLLG---------VRFTPEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLC---ADEEEFTT--------------RCGFGNAVNTLRLRGMI 1379
            +W   L  F++ H  +  +   CG   K  +V  V++       +  + R+      ++A AL AA++LLRE +G+  LM  EA E Y KAAQE  DA  GF V+   + CL N +  +   PK  ++   L  L                        LL  +RPA +L+                              A R    + ++   A   +++                         L++L+S+LA CVRC  PPFP G     L  +                                         L+ L+ L           +    E    L    + RLG VL + L L H   + +  KL V+NLL+ MP  +A  L E+G LP +V++ ELQL+  EF+    D A  L P L VL     ++ E +  +K  IFP E D  WEQ   R           D   A K  +++R+HP DAP G+LRAR +  +T  ES+S+    +LL+ LC   A E+                  R GFG+ V  LR RG++
Sbjct:   22 EWRDALSAFASEHSTSAGILQACGEAAKDKVVAAVLQ------AMQPQKRADAAALSLQAAALSAAKVLLREAQGSAPLMTMEASEVYLKAAQESRDADEGFAVATAGVSCLVNLLVHEAAAPKPVVAANMLVALPRASTAPRSXXXXXXXXXXXXXXXLLGGARPAPLLHNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLAARALYRLCATRAPAAAVVREGCAXXXXXXXXXXXXXAGTGDCGKTLVILVSLLAWCVRCEDPPFPQGAGVAPLATEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLKLLYFLASTGAVDVERAQGAAREVITVLGQALLLRLGQVLAEALLLPHDRAEAYECKLHVVNLLMHMPATYALYLSENGILPSLVRITELQLLACEFEADTFDPAVGLAPILAVLAAAAGSAAEPRRILKALIFPAETDAQWEQYQRRP-------AAQDEAEA-KAERERRMHPADAPPGSLRARLIACLTMVESTSRRFAGELLWALCEGSAGEDXXXXXXXXXXXXXXXXXYRVGFGSGVGLLRTRGLL 579
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BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match: A0A7S2XIN1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIN1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.250e-31
Identity = 106/353 (30.03%), Postives = 178/353 (50.42%), Query Frame = 3 
Query:  423 VWDQPKGQISFVQLGGLDTLVGLL--QASRPASVLYFACRIFNVVGS------SNPTAFNELKKKQ----------DLLLLLLSVLAGCVRCTHPPFPG---GEDRVKLMVQALQGLFLL-------GVRFTPEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDA--AAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1388
            VW     Q     + G+  L+ LL  + S  A +L     + N++GS         TA  EL +K+          D+  +L+  L   ++ + P FPG    + R  L ++ L+ L+ L         R +  E ++    D MK++G +L  IL+L +    V+  KL  +NLL+D P  +A++LL +G +P ++ +++LQ+ +   ++GG     A  + P L V+N+   A+   +  VK  +FP   D+     ++ E+ +  +  G            + + P+DAPKGTLR   ++ MTATES+SK   S+LL+ LC AD  EF  R GFGNAV+ L ++G++ +P
Sbjct:  270 VWSTKARQELIDSVNGIPILMDLLLSKVSSTALLLSIVRNVHNLIGSVPGVVNKMDTAIEELIEKRAPDDFVKGGTDITSVLVETLTWTIK-SEPSFPGDASSDRRADLALEILRVLYALRNGQIAGSQRGSFSEIQEKRIEDNMKKMGALLCAILNLPNENKQVYDVKLAAINLLMDAPIEYAQILLTNGNIPSLLMILDLQVTKVVVEEGGAKTSNATSIIPILAVMNRFSAANPCIQNIVKEDVFPTNHDDGTVDEVKTEEMDNEAPGG------------RNMRPMDAPKGTLRYNIIQLMTATESNSKRLASELLWTLCDADPNEFVRRTGFGNAVHMLGMKGLVKLP 609
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BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match: A0A7S2G9N3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9N3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.530e-19
Identity = 57/149 (38.26%), Postives = 85/149 (57.05%), Query Frame = 3 
Query:  948 LVRQEFQDGGV-DAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKD-KRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLCADE-EEFTTRCGFGNAVNTLRLRGMISV 1385
            ++R+   DG   D    + P ++ L K+  ASE++K  +K  +FPP+AD  W++RL  +K E   +TG+D     K  +D +R+HPVDAP G+LR    K +   E  +K  V +LL  LC     EFT R G+GNAV    ++G IS+
Sbjct:   15 MLRENSPDGRQGDLRTYVLPVVIALKKVAEASEDAKAMMKTLLFPPDADRAWKERLVAQKLEDDEVTGEDEIAERKKERDAERMHPVDAPDGSLRKVLFKVICCIEEHTKRTVCELLLELCDQNMNEFTLRAGYGNAVFMHHIKGAISI 163
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BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match: F0YKC8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKC8_AURAN)

HSP 1 Score: 96.7 bits (239), Expect = 1.190e-17
Identity = 74/207 (35.75%), Postives = 106/207 (51.21%), Query Frame = 3 
Query:  780 LGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKD---KRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1388
            +G  L  +L    A  DV  A L  +NLL   P  +   L+E+G +PR+  L+E  L     ++        L P L    K+  AS + K  +K  IFPPEAD VW  +L   K   A   GD     E L K+    R+HPVDAP+   R+  LK M   E  +K  V++L++ LC  D +EFT RCG GNA+  L+++ ++ +P
Sbjct:  224 IGVCLRAVLCGARAPYDVPPACLDAVNLLTCAPKTYYCWLVENGAVPRLCNLLEGILNDYVVENKYESPETTLPPLLDAFLKLCAASSKGKRQLKEWIFPPEADAVWMPKLAEAK---ARAKGD-----EALQKEFDAARIHPVDAPRYATRSLLLKLMCDLEPVTKRLVAELVWALCDEDADEFTVRCGVGNAIAFLQIKKLMPMP 422
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BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match: A0A7S1BQP5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQP5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.880e-17
Identity = 79/262 (30.15%), Postives = 134/262 (51.15%), Query Frame = 3 
Query:  666 GEDRVKLMVQALQGLFLLGVRFTPEEKKKA------LEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDG-------------GVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTG-DDYKRAEKLSKDKRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLCADEEE-FTTRCGFGNAVNTLRLRGMISVP 1388
            GE R  ++V+ L+ ++ L    + E  + +       + +TM  LG +L ++L   +A I ++  KL V+ LL+D+P G++  LL +G +  +V ++ LQL+    +               G DA+  L P L+VL+K+  A+      V   +FPPE  E +E+   +E+ E   L    D+  A                GTL+   +K MT+T+S+ K   S+LL+ LC + ++ F  + GFGNA+ TL L+G+IS+P
Sbjct:  331 GELRSGVVVEILRFMYTLNFNHSSELLETSSCNIAGADEETMTHLGVILCEMLQFPNANIYLYEIKLGVVKLLMDLPEGYSFYLLLNGGIDPLVDILTLQLLFNTIEGAPISSEWNHRSGTNGNDASVALLPVLVVLSKLCKANTTICSQVHDRVFPPE--EKYEKGGTKEENEKLILEKCPDFSTATFY-------------GTLQDMLIKLMTSTDSNIKRTTSELLWILCNENKDMFVEKTGFGNAIYTLCLKGLISMP 577
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FRM4_ECTSI0.000e+098.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YV73_9STRA1.340e-3426.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XIN1_9STRA1.250e-3130.03Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2G9N3_9STRA3.530e-1938.26Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YKC8_AURAN1.190e-1735.75Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1BQP5_9STRA2.880e-1730.15Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:471593..478150 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score142.9
Seed ortholog evalue3.7e-31
Seed eggNOG ortholog35128.Thaps5615
Preferred nameRIC8B
Model size1908
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000278,GO:0001667,GO:0001701,GO:0001703,GO:0001944,GO:0001965,GO:0003008,GO:0003674,GO:0005085,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005818,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005886,GO:0005938,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007193,GO:0007275,GO:0007369,GO:0007399,GO:0007405,GO:0007610,GO:0007611,GO:0007612,GO:0007632,GO:0008047,GO:0008104,GO:0008150,GO:0008277,GO:0008283,GO:0008306,GO:0008356,GO:0008542,GO:0009314,GO:0009416,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009966,GO:0009968,GO:0009987,GO:0010004,GO:0010646,GO:0010648,GO:0015630,GO:0016020,GO:0016043,GO:0016477,GO:0017145,GO:0019899,GO:0022008,GO:0022402,GO:0022610,GO:0023051,GO:0023052,GO:0023057,GO:0030154,GO:0030198,GO:0030234,GO:0030695,GO:0031647,GO:0032501,GO:0032502,GO:0032878,GO:0033036,GO:0034613,GO:0036445,GO:0040001,GO:0040011,GO:0042074,GO:0043009,GO:0043062,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043473,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0048066,GO:0048103,GO:0048468,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048598,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050795,GO:0050821,GO:0050877,GO:0050890,GO:0050896,GO:0050931,GO:0051020,GO:0051179,GO:0051234,GO:0051293,GO:0051301,GO:0051336,GO:0051345,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051674,GO:0051716,GO:0055057,GO:0060259,GO:0060589,GO:0061351,GO:0065007,GO:0065008,GO:0065009,GO:0070285,GO:0070586,GO:0070727,GO:0071711,GO:0071840,GO:0071944,GO:0072089,GO:0072358,GO:0072359,GO:0072697,GO:0090036,GO:0090038,GO:0098609,GO:0098742,GO:0098772,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:1902531,GO:1902532,GO:1902850,GO:1903047,GO:1990778,GO:2000114
Exons12
EggNOG free text desc.cell-cell adhesion involved in gastrulation
EggNOG OGs2XDTP@2836,KOG4464@1,KOG4464@2759
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-12_002500.1
Cds size1377
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348725.7665029-UTR-Ecto-sp6_S_contig100:471592..4721001682348725.7665029-UTR-Ecto-sp6_S_contig100:471592..472100Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 471593..472100 -
1682348725.8856716-UTR-Ecto-sp6_S_contig100:478127..4781501682348725.8856716-UTR-Ecto-sp6_S_contig100:478127..478150Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 478128..478150 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348725.7757719-CDS-Ecto-sp6_S_contig100:472100..4721861682348725.7757719-CDS-Ecto-sp6_S_contig100:472100..472186Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 472101..472186 -
1682348725.7831929-CDS-Ecto-sp6_S_contig100:472382..4726021682348725.7831929-CDS-Ecto-sp6_S_contig100:472382..472602Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 472383..472602 -
1682348725.7904894-CDS-Ecto-sp6_S_contig100:473133..4732541682348725.7904894-CDS-Ecto-sp6_S_contig100:473133..473254Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 473134..473254 -
1682348725.7977023-CDS-Ecto-sp6_S_contig100:473525..4736471682348725.7977023-CDS-Ecto-sp6_S_contig100:473525..473647Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 473526..473647 -
1682348725.8051376-CDS-Ecto-sp6_S_contig100:474168..4742411682348725.8051376-CDS-Ecto-sp6_S_contig100:474168..474241Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 474169..474241 -
1682348725.8123345-CDS-Ecto-sp6_S_contig100:474727..4747651682348725.8123345-CDS-Ecto-sp6_S_contig100:474727..474765Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 474728..474765 -
1682348725.8197143-CDS-Ecto-sp6_S_contig100:474987..4751071682348725.8197143-CDS-Ecto-sp6_S_contig100:474987..475107Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 474988..475107 -
1682348725.8268836-CDS-Ecto-sp6_S_contig100:475332..4754551682348725.8268836-CDS-Ecto-sp6_S_contig100:475332..475455Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 475333..475455 -
1682348725.840675-CDS-Ecto-sp6_S_contig100:475907..4760781682348725.840675-CDS-Ecto-sp6_S_contig100:475907..476078Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 475908..476078 -
1682348725.8506875-CDS-Ecto-sp6_S_contig100:476630..4767071682348725.8506875-CDS-Ecto-sp6_S_contig100:476630..476707Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 476631..476707 -
1682348725.866411-CDS-Ecto-sp6_S_contig100:477643..4777721682348725.866411-CDS-Ecto-sp6_S_contig100:477643..477772Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 477644..477772 -
1682348725.877027-CDS-Ecto-sp6_S_contig100:478030..4781271682348725.877027-CDS-Ecto-sp6_S_contig100:478030..478127Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 478031..478127 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.748.1prot_Ecto-sp6_S_contig100.748.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 472101..478127 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.748.1

>prot_Ecto-sp6_S_contig100.748.1 ID=prot_Ecto-sp6_S_contig100.748.1|Name=mRNA_Ecto-sp6_S_contig100.748.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=459bp
MEEFLAAAKGGVTSISGDQWVAILRRFSTAHEATWAVSPVCGLDNKRILV
RVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQ
EALETYTKAAQEDGDATCGFRVSLMALKCLNNAVWDQPKGQISFVQLGGL
DTLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSV
LAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTPEEKKKALEGDTM
KRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPR
VVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAI
FPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTL
RARCLKQMTATESSSKTAVSDLLFNLCADEEEFTTRCGFGNAVNTLRLRG
MISVPGIG*
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mRNA from alignment at Ecto-sp6_S_contig100:471593..478150-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.748.1 ID=mRNA_Ecto-sp6_S_contig100.748.1|Name=mRNA_Ecto-sp6_S_contig100.748.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6558bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:471593..478150- (Ectocarpus species6 EcLAC_371)
AGCCACAGCAGCAGGGAGTGGTGATGGAAGAGTTCCTCGCTGCCGCCAAG
GGCGGAGTGACATCGATATCTGGAGATCAGTGGGTAGCCATCCTGCGACG
CTTCTCAACTGCTCACGAAGGTAGGTTCATCGTTGGATCCGAAGGGTGTA
CCTGTTCCTGCGAGTACTCTCTCTCAACACAACAACATGTGCAACACTAC
TGCTGTACTGTACACCGGCATCAACGCACCAGAGTCTACAGCGCACTCAG
CTTCGGACATTGCGAGTGGCGAGTAGACCCAAGAATTAGGTTATTTCCGT
GAGTAGGCCATGTGTTAAACTTTTGGTTTGCCGCTGTATCCTGGCCGAAA
TTGCTCTTGTCTTCTTTGTCGCATTCAGCGACCTGGGCGGTGAGTCCTGT
CTGTGGGCTCGACAACAAGCGGATTCTCGTGCGAGTGGTGGTGGAGCTTC
TCCACCATACCGTTGGGTTGAATGGGAGACACAGGAGCCGGACTCTTGGT
CCGGGAGGTGAGGTCTCGGCAGTTGCACCCTGCTGCCCGATTAGGTAAAA
TAGTGGTGCGGACCGTTCTCGAGCACAAGCGTATCGGTGCATCCGGCGGG
GCGCCAACAGCTGTAGAATATTTGACTACAAGCAGTCTAGCCACGTGCAC
GCTTATGTGGAAAAGCGTGTGGATGGAACGTTGATTCCAATTGCGCCATA
TGCCGTCGTAAGTTCCTGGACCGTTGTGTGAATGTTGGTATACTCCAGAC
TATGCGTGGTGTCTACCGTGGGTTGCGTAAGATACCACCCCCCCCCCGGG
GCCAATCAAAGCTCGAGTACTCTTCAGCTCTGCAGCGAAAACAATCGCGG
TGCCGACAATGGCGGCGTTGGAACCATCTTGTCGAGAGCTTTTCGAGCAA
ATATCACTTGACTTTGCGTCCTCTTCGTCATGGAGTAATGGAGCTGTGCA
AATCGATCCAAGGGGTATGGTATCTCATGCAGCAACCTAAGGTTTTTGTA
TGGGCAACCAACTTGTATTGCATAGCAATGCACAGCTACAAACGTGTATG
CTGATCCGATACGGCAGAGCCAACGCGCAACTGTATAAAGAGCCCATACC
GGCTACTGGATGGGTGCTGTTGTTGCTCAAACTAACCATTAGTGGAGACA
CGATGGGTGCTCTTCCCCTCTGAATATGTCAATGACGTATACGTATCCAG
CACGAAATAGTACCAGACATTCATGCCGCGCCTCCTTGTCTTCGTCCCTG
GTTTTTGAGGACTTCTATGCAATGTCGGCTTATCCCATTCTTCTAGAGGA
ATACAGTCATCGAACAAACCGCAGCGGCTCACCCCTTCTTCTATGACAGT
GTATACATACCCATACCAACCTTCGCTTGCACGGAATCGCTTTGTTATCG
TTTGCTGTGCTTGTTACTTTGTACTGCTGCTGGATGTTGGCAGTGGAGGC
TGAGGCACTGTTGGCGGCTCGGATACTGCTGAGAGAGAGGGAGGGAGCTG
AGAGGCTCATGGACCAGGAGGTCTGTTGAGAGGCAGTTGTTCCCTACTCT
TACAGCAAAGATTTGTTTTAGCAAAGCGTTTCTTGCAGTATCTCAATTGA
TGTTGTGTCGGGAGGTAGTTGAGAGTTCGGAGGGATGTAGGCCAGGTTCG
CCATAACTGCATGCACTGCGGCACAGTAGTTTTATGCAGAAATTCGTAGT
AAACGGCGACCGTGTCGTGTCCGTTAATGCAATAGTCTTAAGCGGTTTAG
AGCCAACCATTGCGTGTATGATAGACACAAGTATGAGGCTCGTTCAGCCG
GCGCAGCGTGGCATCCAAGGGCGAGGCGATGACCGAAGGAGTAAGAATAA
TGGTAGGAGCTGTGAGATAGTTTGCACGTCTTGCTTGAGCGCGGGGGACT
TAGTTCTCCGCGGTTCGAGCCCAGCACGTGTAATGTACTGCGCCGGCTGC
TACATCTACCTAGTGTTTTCATCATGGTGGCACTGGCATCCACATGACCC
AGTGCCAACGAGTCAAGCGTTGCTATTCCCAAGCCGCTATCCGCGCGCGT
ACTCGTCGCTATTTTCCTCCAGGCTCTGGAGACTTACACCAAGGCTGCAC
AGGAGGATGGCGACGCGACATGTGGGTTCCGCGTGAGCTTAATGGCCCTG
AAGTGCCTGAACAATGCCGTGTGGGACCAGCCGAAGGGGCAGATCTCCTT
CGTGCAGCTGGGGGGACTGGACACGCTGGTCGGTCTGCTGCAGGTGAAGC
AGTACAGTAGAGGGCGCCTGAGGCTTTACAACATGATTGTCTGCAGTCTG
TCGTACGAGACACGGTTCGTTTCAAGCAGTGGGTCTGGATGCGAAGCTTC
TTGGGCAGTGCTACGATGTTTCCAACATGAGAATCCGAAACGCGCCTCAC
CATACACCTGTTCTTCAACAGATGATTGTGTTTTCCCTCTTTTTCTTGAC
GAACACACCCGCGTTGTTTCTTGAACCCCCTACACACCTTCTTGGCTCGG
AGGTCGTCCAGCACTAGAAGCACCGCCGCAAGTGTTGCGTCTGCGCAGGA
CTGCAGTGCAAGCCTTGATTTTCCCGCTCATGCTCCGCAGAAGATGGCTT
GAAGGCTGTGTGCACGTGAATCGTGTTTCGATTGCTCAAACACGTGACGT
TCCCTTGGTCTTGTCCGCACGCACATTGCACTGCTGTAAACGCAGGCCTC
TCGACCAGCGTCCGTGCTGTACTTCGCGTGCCGCATCTTCAACGTCGTCG
GTTCCTCCAACCCCACCGCCTTCAACGAGCTCAAGAAGAAGCAAGACTTG
CTGCTGCTGCTGCTCTCGGTGGGTCCTCCGCATCGTTTCCTGTCGTACAT
GACAGGGGTCGTGGTGGTGGTTCGGTTCGGCGATATGGCGTGTCTTGTCT
CTTGAATAGAAACAATTATGTACCGTGCTTTTGCCCTGATGGATTTTCGT
CTCCGCGTATGCCTCGGCGGTTCCTCCAACTTTTGCAAGAGACCTATACT
GCTGGTAACTGGAAAGCTGCTGGTCGCCCCGAACGTGTTGTAGGTCCTAG
CTGGCTGCGTTCGGTGCACGCATCCGCCGTTTCCGGGAGGCGAGGACCGT
GTCAAGCTCATGGTGCAAGCGCTGCAGGGCCTCTTTCTTCTGGGCGTCCG
ATTCACACCAGAGGTGACTCTTAAGTATTATGTTGTGCTTCTCCTTCTTC
TTGCTGTTGTTGGTGTTGGTGTTGGTGTTGTCCATATTGCTGTTGTTCTG
TGGTCACTCTCGTACCGGTGGAGAAGTGTGCGGGTGCATAACTCGCGTTG
CTGCTGGCTCTTGTCGCACCCTTGTTCTGTTTGATGTACACCATACACAA
CTTCGGTACACGGGGTGACGGACTGGCCCCGACAGGAGAAGAAAAAAGCT
TTGGAAGGGGACACCATGAAGCGGTGAGTGTGGTATTCGAACAGTCGGTG
TAGCTGAACATGACCTGATTTGCGACCCACATTTGCCTCTCATGGGCAGC
AGGTTACTTTGTACAAAACTTTTTTTTTTTTACGTTGAACTGGAGCGGAG
CAGAGCAATCTGATCACACAACGTCCGTGCTGTGCGCACTCACCCTTGCC
TCGCCAAGCTGCTAAAGCCACGGGAATTCACACAGAACATGCCGCAGCTT
TGTGAGGCATAGGGAATCTCAACAGTGCTATCCCTTAGAAACACTCCCGA
TACCGTTACAGCACACTGCTGCAGTACAGTGGGAACGGAACGAAAAGTTG
ATGCCCTCTGTGTCACTCAAGCTGTGGTCGGTAGTTTGTTTGTTTAGTGT
ACCCCTAGAGCAGCTGCTACTCTTCCTTAAATCTCAAATCCTCGAGTCTA
CTTTTGCCTAACCCCTCCCTCGATTTCCGTGTTTGGCGGGGTGTGGTCTC
CGTGCTCAGGCTCGGGTACGTGTTGGTGGACATCTTGCATTTGGACCACG
CAGAGATCGACGTCTTCATGGCCAAGCTACAAGTAAGCGACGGTCTTGAG
CGGCGTGCCACAAAACCTTTCATTCTGGCGCCAGCGCACTACGCCTTCTG
CGCACACACCCAGGACCAAAGAAAACGAAAAGGAAACATGTACATTTAAA
GAAAAGGCGGCTGTCGCCCGAACACCCGTTCTTTCGATCGCTAGCTGTTT
TCCCTTGAACCGCACGCAAAACAAGACAAGACAAGACAAGACAAGACAAG
ACGAGAGCCGTGCACTCACTTGCGTTCCTTACACAATTACTTCTTCGGCT
TGATCTGGACAATGCTCGTATCGGCATACACGTACCACATGCAGCGCAGG
CGGCTGCAGGGGTGAAGCTAAAAGAGGGGGGGGGAGGCACAGAACCGCAA
TAAGTCCTTGGTGTTCTCGTTCTGTGGGCCATGTCCCCTGGCGCGAACAC
TACAGTGGGTGCCACAGGGGAAAGTCACAATGTCTCGAAGGCGAGACACT
CCATCCTCTGTGCGACGTGATTTTTATTCTTGTTCCATGTCTGGTATTTG
CAGGTGCTGAACTTGCTGCTAGACATGCCTGGTGGCTTTGCGGAGGTGCT
GCTTGAGCACGGCTGTCTCCCTCGAGTTGTCCAGCTCGTGGAGCTCCAGC
TTGTGCGACAAGAGTTCCAGGATGGGTGAGTAGTAAAAGCCTATGGTAGA
TACCGGTAGATTTTACCGTATCCGTCCAACCCGACGTAGACCCGACTCGA
ATGGAGCACCTGACGACTTGCTGGCGGGCCATATTGAATACGCTGTCTCG
ACTCTCTCTTGTGCTTGCTTCGTCTCAAGGACCCACATATTCTGACCCAT
GGTGCTAGTAGCAAACACGAGCCAGAACAAAATTATTGCTCATTTTTTCC
CCCACCTCTTTGCCTCGTGTCGTAACCGGCACTCGTTCCTCGACAGCGGT
GTCGACGCAGCCGCTGAGCTAACCCCTGGGCTGCTGGTGTTGAATAAGAT
GGTGCTGGCATCGGAAGAGTCCAAGATGGCCGTGAAGAGAGCGATATTTC
CCCCCGAGGCTGATGAGGTGGGAGATGATCAATAGGGAGGAACGTTTGGG
TACACCTGGCTGGAGTCGAGCGCAACGCAGGAGAGGAATCCTGTACCTCC
CCGTTTATGCGATTGCTGACCCCGAAGCTCGCTTGAAACACCAAACCGGC
ATGGTTCAATTTGTGTGCTTTGGTGGCAGACGATTTTTGCCCACAGCAAA
AAGCGTGATGAGTACTTCAACCTCAATATACGGACTTTGGGAACACAAGC
AATCATCACCAACCACTGCTCAATTGCGCCTTTGCGAGTGATCCAGCGAC
AGCATGCCGCACCGTGACAACAAGGCCACATGATATTGTCTCGTTTTCAT
GCTGCATCAACATCCCATGGTGTCATATAGCCTCACAAGGTACACGCAAG
TGGGTTTACCACTGCACCAGGGCATGAATTTTTGCTGAGACTCGAGATGC
CATGTCTCAGCGTGCCGAAGGTTCTGATCATCAGTACCCTATCCGCACGC
TATTGTGAACATCCCGCCTCTCTTTATCCGCGCTCCTTGCTCTGGTAGGT
GTGGGAGCAGAGGCTGGAGCGAGAGAAGAGAGAGCTCGCATCTCTAACAG
GCGATGACTACAAGAGAGCCGAAAAACTCAGCAAGGACAAGAGGGTTCAC
CCCGTGGACGCGCCGAAGGGGACGCTTAGAGCCAGGTGCCTGAAGCAGAT
GACGGCAACAGAGTCCTCCTCGAAAACGGCAGTGTCTGATCTGCTGTTCA
ATCTCTGCGCAGACGAAGGTGCGGCGAGTGCGTGGCGTGGTGATCGAGAT
TTAGTGCAGCGGAAAATGCCACCCTCCTCTTGTTTGTAGGTTTCGCCACG
ACCAAGGCAGAGCTCGCAGCCAGTCTCTTGTGAAGGGGTTGCGCAAGATT
GTTCGTGCTCTGTACGATATACTCACATGCCTCGTGCTCGCCTCGTCTCG
TTACCCTTGCGCAGAAGAGTTCACCACAAGGTGCGGCTTTGGGAACGCCG
TCAACACCCTTAGGCTCCGAGGGATGATTTCGGTGCCTGGCATAGGATGA
GTTGGTGCCAAGGGACTTTCAAAACATCTGTTGGATTGCAGAGGATGTGT
TGTACCGAGAAGTCACGGGCGTCTCATGCCGCATTTGCAAGCAGCGTGAC
CATGCAGTCGGTGTCTGATATTGTATCTAACTTGCGCGCTGTCACCTGTA
ACTTCTAGTAGTTTTAACGTTTTTAACTTTTAACAAGTACATGCATGCTT
GTACCTGGTTGAAGTAAATCAAGAGTGGGACCGACACACCACGAACGTTT
GTGTCTTGCATAGTGCACGAGTTGGTAGACTATGTAGACTATTATTGTAA
AAGCATACCGTGGTTGTCTTTTTAACCAAGATCTGACTGGACCACCGAGG
GGGACAACACACGAGGAAATAAGCGAAGAGTCCAAAATGGACTGCGTTCC
AAACTGGGCGTGGGGGTTGACAGACTGTCTACTGCTGTAGATGCCTATTG
TACGAAGACTACATAGAGCAGCGGCAGTGCTTCGACTACAAAGTACTTGT
AGACATAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:471593..478150-

>mRNA_Ecto-sp6_S_contig100.748.1 ID=mRNA_Ecto-sp6_S_contig100.748.1|Name=mRNA_Ecto-sp6_S_contig100.748.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1377bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:471593..478150- (Ectocarpus species6 EcLAC_371)
ATGGAAGAGTTCCTCGCTGCCGCCAAGGGCGGAGTGACATCGATATCTGG
AGATCAGTGGGTAGCCATCCTGCGACGCTTCTCAACTGCTCACGAAGCGA
CCTGGGCGGTGAGTCCTGTCTGTGGGCTCGACAACAAGCGGATTCTCGTG
CGAGTGGTGGTGGAGCTTCTCCACCATACCGTTGGGTTGAATGGGAGACA
CAGGAGCCGGACTCTTGGTCCGGGAGTGGAGGCTGAGGCACTGTTGGCGG
CTCGGATACTGCTGAGAGAGAGGGAGGGAGCTGAGAGGCTCATGGACCAG
GAGGCTCTGGAGACTTACACCAAGGCTGCACAGGAGGATGGCGACGCGAC
ATGTGGGTTCCGCGTGAGCTTAATGGCCCTGAAGTGCCTGAACAATGCCG
TGTGGGACCAGCCGAAGGGGCAGATCTCCTTCGTGCAGCTGGGGGGACTG
GACACGCTGGTCGGTCTGCTGCAGGCCTCTCGACCAGCGTCCGTGCTGTA
CTTCGCGTGCCGCATCTTCAACGTCGTCGGTTCCTCCAACCCCACCGCCT
TCAACGAGCTCAAGAAGAAGCAAGACTTGCTGCTGCTGCTGCTCTCGGTC
CTAGCTGGCTGCGTTCGGTGCACGCATCCGCCGTTTCCGGGAGGCGAGGA
CCGTGTCAAGCTCATGGTGCAAGCGCTGCAGGGCCTCTTTCTTCTGGGCG
TCCGATTCACACCAGAGGAGAAGAAAAAAGCTTTGGAAGGGGACACCATG
AAGCGGCTCGGGTACGTGTTGGTGGACATCTTGCATTTGGACCACGCAGA
GATCGACGTCTTCATGGCCAAGCTACAAGTGCTGAACTTGCTGCTAGACA
TGCCTGGTGGCTTTGCGGAGGTGCTGCTTGAGCACGGCTGTCTCCCTCGA
GTTGTCCAGCTCGTGGAGCTCCAGCTTGTGCGACAAGAGTTCCAGGATGG
CGGTGTCGACGCAGCCGCTGAGCTAACCCCTGGGCTGCTGGTGTTGAATA
AGATGGTGCTGGCATCGGAAGAGTCCAAGATGGCCGTGAAGAGAGCGATA
TTTCCCCCCGAGGCTGATGAGGTGTGGGAGCAGAGGCTGGAGCGAGAGAA
GAGAGAGCTCGCATCTCTAACAGGCGATGACTACAAGAGAGCCGAAAAAC
TCAGCAAGGACAAGAGGGTTCACCCCGTGGACGCGCCGAAGGGGACGCTT
AGAGCCAGGTGCCTGAAGCAGATGACGGCAACAGAGTCCTCCTCGAAAAC
GGCAGTGTCTGATCTGCTGTTCAATCTCTGCGCAGACGAAGAAGAGTTCA
CCACAAGGTGCGGCTTTGGGAACGCCGTCAACACCCTTAGGCTCCGAGGG
ATGATTTCGGTGCCTGGCATAGGATGA
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